Sarcophilus harrisii (Tasmanian devil): 100929584
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Entry
100929584 CDS
T02286
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100929584 (NUP85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100929584 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100929584 (NUP85)
03036 Chromosome and associated proteins [BR:
shr03036
]
100929584 (NUP85)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100929584 (NUP85)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100929584 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_12
TPR_19
TPR_14
TPR_4
Motif
Other DBs
NCBI-GeneID:
100929584
NCBI-ProteinID:
XP_003768523
Ensembl:
ENSSHAG00000018482
UniProt:
A0A7N4PB78
LinkDB
All DBs
Position
4:320670992..320697548
Genome browser
AA seq
705 aa
AA seq
DB search
MLSKPEGPDRQFPSQPGSGAGSFVRREIWGPGVCGGPRTPGACVDQTGNMEELDGEPTLT
LIPGVNSKKRQMCFDWGPGEMLVCETLFKKKEKEEKMLGCPFIYIVRKDIDVYSRILRKL
FNESHGIFVGLQRIEEESTGKSRKAQLVRVSKNYRSVIRACMEEMHQVAIAAQDPVSGRQ
YSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEMDALSADVLGSENPN
KHENFWNLATLFVLQGRLDEARQMLSKEADANPASASMCRVLGDLMRTMPILSPGNTQTL
TELELKWQHWHEECERHLQDGTFASNPHLESLCKIMLGDDSALLEQKELLSNWYHFLVTR
LLYSHPTVKPIELHFYAQSSLDLFLGGDSSPEPLDNILMAAFEFDIHQVIKECSIALSNW
WFVAHLTDLLDHCKLLHSHNLYFGSNMREFLLLEYASGLFAHHSLWQLGVDYFDHCPELG
RVYLELHIERIPLNTEQKALKILRICERRQMTEQVRSICKILAMKAVCNNRLGSALSWSI
RAKDAAFATLVSDRFLKDYCERGSFSDLDLIDNLGAAMMLSDRLTFLGKYREFHRLYGEK
RFADAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYELMQCLEDLTIGR
TESRDLEGQRLQDDDIETTKVEMLRLALARNLARAIVKEGTLEGS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaaaacccgaagggcctgacaggcagtttccaagccagcctggctctggagcg
gggtcctttgttaggcgcgagatctggggtccgggtgtttgtggcggccctcgaacccct
ggtgcttgcgttgaccagaccggcaacatggaggaactggacggcgaacccacgctcacg
ttgattccaggagtaaattccaagaagaggcaaatgtgttttgactggggacctggagag
atgctggtgtgtgaaactttgttcaaaaaaaaagagaaagaagagaagatgttaggctgc
cctttcatctatatagtccggaaagatatagatgtttattctcgtatccttaggaaactt
ttcaatgagtctcatggcatctttgtggggctccagaggattgaggaagaatcaacagga
aaatccaggaaagctcaattggttcgagtgagtaaaaactatcggtcagttataagggcc
tgtatggaagaaatgcatcaagtagcaattgctgctcaagatccagtctctggtcgtcag
tatagcagtcaggtttctattctttctgcaatggagttaatctggaacctttgtgaaatc
ctctttattgaagtagccccagctggtcctctactccttcacctccttgactgggtccga
ctgcatgtgtgtgagatggatgctttgtcagcagatgttcttggtagtgaaaatccaaac
aaacatgagaacttctggaatttggcaaccctcttcgtgctgcagggccgccttgatgag
gcacggcaaatgctgtccaaagaagccgatgctaaccctgcttcagccagcatgtgcaga
gtcctgggggacctcatgaggacaatgcctattctcagccctggcaacacacagacattg
acagaactggaactgaaatggcagcactggcatgaggaatgcgaaagacatctccaagat
ggcacctttgcttctaaccctcacttggagtccctctgcaagatcatgctgggagatgac
agtgctttactggagcagaaagaacttctcagtaactggtatcatttcctggtgactcgg
ctcctctactctcaccccacagtgaaacctattgaactgcacttctatgcccagtccagc
ctagatctctttctgggaggtgatagtagtccagaacctctggacaacattttgatggca
gcttttgaatttgacattcatcaagtcatcaaggaatgcagcattgccttgagcaactgg
tggtttgttgctcacttgacagacctgctggatcactgcaaacttcttcattctcacaac
ctctattttggttccaatatgcgagaatttcttctgctcgaatatgcatcaggactcttt
gctcatcacagcttatggcagcttggtgtggattactttgaccactgtccagagctgggt
agggtttacctggagctacatattgagcggattcccctaaacacggagcagaaggccctc
aaaatacttcggatttgtgaaaggaggcagatgactgaacaagttcgaagcatttgtaag
atccttgccatgaaagctgtttgcaacaaccgcctgggctctgccttgtcctggagcatc
cgagccaaagatgcagcttttgccaccctagtctccgataggttcctaaaggattactgt
gaacggggcagtttctcagacttggatctcattgacaacctgggcgctgctatgatgctt
agtgatcgtctgactttcttaggaaaataccgtgagtttcaccggctatatggagaaaag
cgctttgctgatgctgcctccctgctgctatcactgatgacttcccaaattgcacctcga
tccttctggatgacgttactgactgatgcccttcctctactagaacaaaaacaggtcatc
ttttctgctgagcaaacctatgagctgatgcaatgcctagaggacctgacaataggaaga
acagagtccagagatcttgagggtcagagactccaggacgatgacatcgagacgactaaa
gtggaaatgttgagacttgctcttgcacgaaaccttgcacgggcgattgtgaaagaagga
accttggaaggctcatga
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