Sarcophilus harrisii (Tasmanian devil): 100929616
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Entry
100929616 CDS
T02286
Symbol
FMR1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100929616 (FMR1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100929616 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
100929616 (FMR1)
mRNA cycle factors
Stress granule specific factors
100929616 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
100929616
NCBI-ProteinID:
XP_012408732
Ensembl:
ENSSHAG00000012940
LinkDB
All DBs
Position
X:49002574..49061547
Genome browser
AA seq
480 aa
AA seq
DB search
MIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLEVPEDLRQMCAKES
SHKDFKKAVGAFSVTYDPENYQLIILSISDVTTKRANMLIDMHFRSLRTKLSLILRNEEA
SKQLESSRQLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIY
GEDQDAVKKARGYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENDKN
IPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQLRQIGASSRPP
PNRADKDKGYMTDDGPGLGRGSRPYRNRGHGRRGPGYASGTNSEASNASETESDHRDELS
DWSLAPAEEERDNYLRRGDGRRRGGGGRGQGGRGRGGFKGNDDQSRTDNRQRNVRDAKGR
TADGSLQIRIDYNNERSVHTKTLQNTSNEGSRLRTGKERNQKKEKSDSVDGQQPLVNGVP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagggcgagttttatgtaatagaatatgcagcctgtgatgccacttacaatgaa
attgtcacaattgagcgtttaagatctgtgaatccaaacaaaccggcaacaaaagatact
ttccacaagatcaaactggaagtgccagaggatttacggcaaatgtgtgccaaagaatca
tcacataaggacttcaaaaaagcagttggggctttttctgtaacatatgatcctgaaaat
tatcagcttatcatcttgtctatcagtgatgtaacaacaaagagggcaaatatgctgatt
gatatgcactttcgaagtcttcgaactaagttgtctctgatactgagaaacgaagaagct
agtaaacaactggagagttcaagacagcttgcttcaagatttcatgaacagtttattgtc
cgtgaggatttgatgggtctagcaattggcactcacggtgctaatattcagcaagctaga
aaagtacctggagtcactgctattgatttagatgaagatacttgtacatttcatatttac
ggagaggatcaggatgcagtgaaaaaagccagaggttatcttgagtttgcagaagatgta
atccaagttccaaggaacctagtaggcaaagtaataggaaaaaatggaaaactgattcaa
gagattgtggacaagtcaggtgttgtaagagtgagaattgaggctgaaaatgataaaaat
attccacaagaagagggaatggtaccatttgtctttgttggaaccaaggacagcatcacc
aatgcaacagttcttctggattatcatcttaattacttaaaggaagtagaccaactgcgt
ttggagaggctgcagattgatgagcagttgcgacagattggtgcaagttctagaccacca
ccaaatcgtgcagataaggataaaggctacatgactgacgatggcccgggacttggccga
ggtagtaggccttacagaaatagaggacatggtagacgtggtcctggatatgcttcagga
actaattctgaagcatcaaatgcttctgaaacagaatctgaccaccgagatgaactcagt
gattggtctttggccccagcagaggaagaaagggacaactacttacgtagaggagatgga
cgaagacgcggaggtggcggccgaggacaaggaggaagaggtcgtggcggttttaaagga
aatgatgatcagtctagaacagataatcggcagcggaatgtaagagacgctaaaggaaga
actgcagatggatcacttcagatcagaattgactacaataatgaaagaagtgtccacact
aaaacattacagaatacgtcaaacgaaggtagtcggctgcgcacgggtaaagagcgtaat
cagaagaaggaaaaatcagacagcgtggatgggcagcaaccgctggtgaatggagtaccc
taa
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integrated database retrieval system
