Sarcophilus harrisii (Tasmanian devil): 100929653
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Entry
100929653 CDS
T02286
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100929653 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100929653 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100929653 (VPS36)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100929653 (VPS36)
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100929653 (VPS36)
Exosomal proteins of colorectal cancer cells
100929653 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
Xre-like-HTH
BBL5
Motif
Other DBs
NCBI-GeneID:
100929653
NCBI-ProteinID:
XP_031817827
Ensembl:
ENSSHAG00000009590
LinkDB
All DBs
Position
3:524735650..524776467
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFVWTNGLLEINETLVIQQRGVRIYDGEEKIKFDAGVLLLSTHRLIWRDQKNHDCCIA
IPLSQIVFIEEQAAGIGKSAKIVIHLHPASSNKDPGPFQSSKSSYIKLSFKEHGQIEFYR
RLSEEMTHRRWENMPVSQLMQRKSGQEPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMVKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP
LRLRIFDSGVMVIELQSHNEEEMLASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttcgtgtggacaaacggcctcctggaaatcaatgagacgctggtgatccag
cagcgtggggtccgcatctacgatggcgaggagaagataaaatttgatgctggagtcctt
ctcctcagtacacaccgactaatctggcgagatcagaaaaatcatgattgttgcattgct
attcctctttcccaaattgtattcattgaagaacaagcagctggtattggaaaaagtgcc
aaaatagtgattcatcttcacccagcttcttccaacaaagaccctggtccttttcaaagc
agcaagagctcctatatcaaactttctttcaaagaacatggccagattgagttttatagg
cgtttatcagaagaaatgactcatagaagatgggagaatatgccagtgtctcaactaatg
cagagaaaaagtggacaagagccaggaagaataagagccgttggaattgtagggattgaa
aggaaactagaagaaaagagaaaagaaactgacaaaaacatttccgaggcttttgaagac
ctcagcaagctcatggtcaaggcaaaggaaatggttgaattatccaaatctatagctaat
aaaattaaggataaacaaggtgatatcacagaagatgaaactatcagatttaaatcttac
ttgctgagcatgggtatagctaatccagttaccagggaaacacatggctcaggcacacat
taccatatgcagttggcaaaacaactagcgggaatacttcaggtgcctttagaggaacga
gggggaataatgtcgctcacagaggtatactgtttagtaaaccgagctcgaggaatggaa
ctactctcgccagaggacttagtaaatgcttgtaagatgttggaagcactgaaattacct
ctcagactccgaatttttgacagtggtgtcatggtcattgagcttcagtcccacaatgag
gaggaaatgcttgcttcagcattagagacggtatcggaaaagggatctctcacatccgaa
gaatttgccaaacttgtaggaatgtctgttcttttagctaaagaaaggttgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgaggttttatccaaat
ttgttcatgacccagagttaa
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