Sarcophilus harrisii (Tasmanian devil): 100929671
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Entry
100929671 CDS
T02286
Symbol
SEMA6C
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6C
KO
K06842
semaphorin 6
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100929671 (SEMA6C)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100929671
NCBI-ProteinID:
XP_031823361
Ensembl:
ENSSHAG00000013618
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Position
4:complement(426383608..426398966)
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AA seq
905 aa
AA seq
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MPRGPPLTPLPLLFLLLSSTPRTEASFPQDPLPLATSDLQGLPPLSWFRGLEDDAVAGEL
GLDFQRFLILNRTLLVAARDHVFSFDLQAQDWEGLVPDKYLTWRSQDVENCAVRGKLRDE
CYNYIRVLVPRDSRTLLACGTNSFSPMCRSYGISSLQQEGEELSGQARCPFDATQSTVAI
FAEGSLYSATAADFQASDAVVYRSFGPQPPLRSAKYDSKWLREPHFVHAVEHRDHVYFFF
REVSVEDARLGRVQFSRVARVCKRDVGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDAL
QALTGPVPLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIEHGFEGKFKEQRSPDGAWTPV
PEDRVPSPRPGSCAGLGRAASFPSSRDLPDEVLTFIKAHPLLDPAVPPATHRPLLTRTGR
ALLTQVAVDGAAGRHGNTTVLFLGTEDGTVLKVLPPGGGHGNTEPVLLEEIDTYSSSRCG
GKRSAQLARRVLGLELDPDGHRLFVAFSGCVVHVPLSRCTRHGACQRSCLDSQDPYCGWE
SFKGCVDVRGPGWTDLEQDGDKVVMDQGDCHDGATGSHSGPGDSAYGVRRDPPPASAPAT
VPVPLLLASVAAAFALGASVSGFLVSCACRRAYRRSPRGTKGAGNPGCPAASPGSLARLP
GGSRRQLGGAPPSPSTHLPPQQALPARLACLPPRSPQLPAKXVQGARGPWEWNHNGNNAP
AGPRPLGRSGPPQGVVGPPRAVPPGXGTTLEELLRYLHAPASRGGTPPQTPLPPLGGPHP
SRPAPLFRPFPPRDXVPPRLDIPPGPGPSLPPLSAPAPRLGIGGSRGISPSPHRGPPGLL
TRVPSVGTSRYSGGHGRYPLYLGRPEGYRGRALKRVDVEKPQLPPKAPLLVTSPSQAPPG
GHFNY
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgccccggggccctcccctcacacctctgccgctcctgttcctgctgctgtcctccact
ccccgcaccgaggccagcttcccccaggatcccctccctctggcaacctctgacctccaa
ggcctgccgcccctctcctggttccggggcttggaggatgatgctgtggcgggagagctg
ggtctggacttccagcgattcctgatcctgaaccggacgctgctggtggccgcccgggat
catgttttctcctttgatcttcaagctcaagactgggaagggctggtcccagacaagtat
ctgacatggaggagtcaggacgtggagaactgtgctgtgcgagggaagctgagggacgag
tgctacaactacatccgtgtcctcgttccccgggactcccggaccctccttgcctgcggg
acaaattcattcagccccatgtgccgcagctatgggatttcttccctacagcaggagggt
gaggagctgagtgggcaagctcgatgcccctttgatgccacacagtccactgtcgccatc
tttgcagagggtagcctctactccgccacggccgcagatttccaggccagcgacgctgtg
gtttaccggagctttggcccccagccccctctccgctccgccaagtacgactccaagtgg
cttcgagagccgcactttgttcatgccgtggagcacagagaccatgtttacttctttttc
cgagaagtctctgtggaggacgctcggctgggacgggtgcagttctctcgggtagcccgc
gtgtgtaagcgggacgtcggcggctccccccgggccctggaccggcactggacgtctttt
ctgaagcttcgactcaactgctctgtgccgggagactcgaccttctacttcgatgcactg
caggccctgaccgggccagtccctctgcacggccgctctgctctttttggggtcttcacc
acgcagaccaacagcatccccggttctgctgtctgtgccttctacctggatgacattgaa
catggatttgagggcaagttcaaggagcagaggagccctgatggagcctggacccctgtg
cctgaggacagggtcccctcccccaggccagggtcctgtgcagggctgggtagagcggct
tcatttccttcttcccgggacctccctgacgaagtcctgactttcatcaaggctcaccct
ctgctggatcccgccgtgccccccgccacccaccggccccttctcacccgaactggcaga
gccctgctgacccaggtggctgtggatggagcggctggtcgccatggcaacaccactgtc
ctcttcttggggactgaggatgggacggtcctgaaggtgctcccccccggaggggggcat
gggaacactgagcctgtcttgctggaggagattgatacctacagctcttcccggtgtggc
gggaagcgttcggcacagttggcccgaagggttctcgggctggagctggatcccgacggc
cacaggctcttcgtagccttctcgggctgtgtggtccacgtgcctctcagtcggtgtacc
cggcatggggcttgtcagagaagctgtctcgactctcaggacccctactgtgggtgggaa
agcttcaaaggctgtgtggatgtcaggggacccggctggactgacctggagcaggatggg
gacaaggtggtcatggatcagggagactgccatgatggggccactgggagtcactccggg
ccaggggattctgcctacggtgtccgccgagacccgcccccagcctcagcgcccgccacg
gtcccggtgccgctgctcctggccagcgtggccgccgccttcgcgctgggggcctccgtg
tccgggttcctggtctcctgtgcttgccgccgggcctatcgccgcagtcccaggggaacc
aaaggggccggaaaccccggctgcccggccgcctcccctgggagtctggctcggctgccg
ggggggtcccggcgccagctgggaggggccccgccgtccccatctacccaccttcctccc
cagcaggccctgcccgcccggctggcctgcctcccaccccgatcaccccagctcccagcc
aaannagtccagggggccagggggccctgggagtggaaccacaacggcaacaacgccccc
gcagggccccggcccctggggcggtcgggccccccccagggtgtggtgggccccccccgg
gctgtcccgccggggtgagggaccaccttggaggagctgctccgctatctccatgctccg
gcctcccggggggggaccccgccccagacgcccctccctccccttggggggccccacccc
tccaggccagcccccctcttccggcccttccccccccgggacntggtccctcctcgcctg
gacattccccctggcccgggtccgtccctgccccccctctctgcccccgctccccgcctc
gggattggaggttcgcgaggcatctccccctccccacaccgggggcctccgggcctgctg
acgcgcgtcccctcggtgggaacctcaaggtattctgggggtcacggaaggtaccctctg
tacctcggccggcctgagggatacaggggacgagccctgaagagggtcgacgtggagaag
ccccagctgccccctaaggctcctctgcttgtgacctccccctctcaagccccccctggt
ggccattttaactattga
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