Sarcophilus harrisii (Tasmanian devil): 100929827
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Entry
100929827 CDS
T02286
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03030
DNA replication
shr03410
Base excision repair
shr03420
Nucleotide excision repair
shr03430
Mismatch repair
shr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100929827 (POLD1)
03410 Base excision repair
100929827 (POLD1)
03420 Nucleotide excision repair
100929827 (POLD1)
03430 Mismatch repair
100929827 (POLD1)
03440 Homologous recombination
100929827 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shr03032
]
100929827 (POLD1)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100929827 (POLD1)
Enzymes [BR:
shr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100929827 (POLD1)
DNA replication proteins [BR:
shr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
100929827 (POLD1)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
100929827 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
100929827 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
100929827
NCBI-ProteinID:
XP_031817691
LinkDB
All DBs
Position
3:608975472..608983366
Genome browser
AA seq
1123 aa
AA seq
DB search
MRFNQPKRSTPVASPRLRLRDDGAANHPQTLGRRLAFCAPGVEDKGRGGKREPRGGGLLR
GAGGQSARPQGPAPAPSAGMPGAKRPRGGGGSWAEEDEAPASQFEEELALMEEMEAERRL
QEQEEEELHVPPEGAAMGQLPASARDARWLRPAPPALDPGQALAFRAINREGAWSGRGTG
AGAGPVGGGVVRVGRGRGRERLSPPHPPQGMYGYLGRGPSPFLRVTLALPRLVAPARRLL
ENGIRLPGLGSPSFPPYEANVDFEIRLVTPTGLFCLWGAFTGGRDCGGPGGLGWPEASPL
TPGPGSWQAWASFVRTMDPDVITGYNIQNFDLPTYSRDNPQNPSPTLAHQVSSFPFLGRI
SGLRSQIRDSSFQSKQTGRRDSKVVSMTGRVQMDMLQVGARAGGGTEAGRPQPSAGRFHF
LGEQKEGPASIITSPQNGNDQSRRRLAVYCLKDALLPLRLLERLMVLVNAVEMARVTGVP
LGYLLTRGQQVKVVSQLLRQAVREGLVMPVVKTEGGEDFTGATVIEPLKGYYDVPIATLD
FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTPDEFIKTPTGNEFVKASVRKGLLPQILEN
LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCVEISQSVTG
FGRQMIEKTKQLVESKYTVENGYSADAKVVYGDTDSVMCRFGVPSVAEAMTLGREAADWV
SGHFIAPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDSHDKMDCKGLEAVRRDNCPLVAN
LVTSSLRRLLIDRDPSGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE
LAERMRKRDPGSAPGLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL
AKPLLRIFEPILGEGRAEAVLLRKGQWGEAGGWGNLGGALGILLLCSPPGPATPAEAVLA
AKVGGSWPPSREQLTRLPGRPSHPVKARGGGPGGQGSPSPGGACQKGGGNPWEPRGGREG
RAGLPAHRPCSSLCPQVAHLSALEERFSRLWTQCQRCQGSLHEDVLCTNLAPKGPGPRPA
LGPPPVLARRGRALPLRAGARVSTGPGARVTGASPPPGLITPT
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttaatcagcccaaacggtcaacacccgttgccagcccgcgactgcgcctgcgc
gatgacggggcggccaatcacccccaaacgctcggccgccgcctggctttctgcgcgcca
ggggtcgaagacaagggccggggcgggaaacgcgagccccggggaggggggctgctcagg
ggggccgggggccagtcagccaggccccaagggccggcgccggcccccagcgccgggatg
cccggggccaagcgcccgcgtgggggtggcgggtcctgggccgaggaggacgaggcgccc
gcgtcccagtttgaggaggagctggccctgatggaggagatggaggccgagcggaggctg
caggagcaggaggaggaggagctccacgtgccccccgaaggggctgccatggggcagctc
cctgcctcggcccgcgacgcccgctggctccggcccgctccgccggccctggaccccggg
caggccctggctttcagagccatcaaccgggagggggcgtggtcagggcggggcacgggg
gcaggggccggcccagtgggagggggcgtggtcagggtaggcagggggcggggccgggaa
aggctctcacccccccaccccccccaaggcatgtacggctacctggggcgcggcccctcg
ccctttctgcgggtgaccctggcgctgccccgcctcgtggcccctgcccggcgcctgctg
gagaatggcatccgcctgcccggcctcggctcccccagcttcccgccctacgaagccaac
gtggactttgagatccgacttgtcaccccgactggcctgttctgcctctggggggcattc
actggggggagggactgcgggggtcctggggggctgggctggcctgaagcctccccactg
acccctggacccggctcttggcaggcctgggcctccttcgtccgcaccatggaccccgac
gtcataacgggctataacatccagaacttcgacctgcccacctactccagggacaaccct
caaaaccccagccccaccctggctcatcaagtctcgtccttcccgttcctgggccggatc
tccggcctccgctcccagatccgcgactcttccttccagtccaagcagacgggccggcgg
gacagcaaagtggtcagcatgacagggcgggtgcagatggacatgctgcaggtaggggcc
agggccggagggggcactgaggcgggccgcccccaaccctccgcgggccgtttccacttc
ctgggggagcagaaggaggggccggccagcatcatcacgtccccccagaacgggaacgac
cagtcccgccgccgcctggccgtgtactgcctgaaggacgccctcctgcccctccggctg
ctcgagcgcctcatggtcctggtcaacgccgtggagatggccagagtcacgggcgtcccc
ctgggctacctgctgacccggggccagcaggtcaaggtcgtgtcccagctcctccgccag
gcggttcgggagggcctcgtgatgcctgtggtgaagacagagggcggggaggacttcaca
ggagccacggtgatcgagcctctgaaagggtattacgacgtcccgatcgccaccctggac
ttctcctccctgtacccctccatcatgatggcccacaacctgtgctacacgacgctgctg
aggccgggcaccgcgcagaagctgggcctgacccccgacgagttcataaagaccccgacg
gggaacgagttcgtgaaggcctccgtgaggaaagggctcctgccccagatcttggagaac
ctgctcagtgcccgcaagagggccaaggcggagctggccaaggagacggaccccctgcgg
cggcaggtcctggacgggcggcaactggccctgaaggtcagcgccaactccgtctacggc
ttcaccggggcccaggtcgggaaactgccctgcgtggagatctcccagagcgtcactggc
ttcgggcgacagatgatcgagaagaccaagcagctggtggagtccaagtacactgtggag
aatgggtacagcgccgacgccaaggtggtgtacggagacacggactcggtgatgtgccgc
ttcggggtcccctccgtggcggaggcgatgacgctgggccgggaggccgccgactgggtg
tccggccactttatcgcgcccatccggttagagtttgagaaggtctacttcccatacctt
ctcatcagcaagaagcgctacgcgggcctcctgttctcctcgcgcccggactcccacgac
aagatggactgcaaggggctggaggccgtgcgccgggacaactgcccgctcgtggccaac
ctggtcacgtcctccctgcggcgcctgctcatcgaccgggacccctcgggcgccgtggcc
cacgcccaggacgtcatctcggacctgctctgcaaccggatcgacatctcgcagctggtg
atcaccaaggagctgacccgggccgcggccgactacgcggggaagcaggcccacgtggag
ctggccgagaggatgaggaaacgagaccccggcagcgcccccggcctgggggaccgagtg
ccctacgtcatcatcagcgcagccaagggcgtggcagcctacatgaagtcagaggacccc
ctgtttgtgctagagcacagcctgcccatcgacacccagtactacttagagcagcagctg
gcgaagcccctgctgaggatctttgagcccatcctgggcgagggccgggccgaggccgtg
ctgctgcgtaagggccagtggggagaagcggggggctgggggaacctggggggggccctg
gggatcctgctgctgtgttccccaccaggcccagccacccccgccgaggcggtgctggcg
gccaaggtcgggggctcctggccccccagcagggagcagctcacccggctgccgggccgc
cccagccacccggtgaaggctcggggcggggggcccggtggccaaggttctccttccccg
gggggggcttgccagaagggaggggggaacccgtgggaacccagaggagggagggagggg
agggctgggctcccggcccacaggccctgcagctccctctgcccccaggtagcgcacctg
agtgcactggaggagcgcttctcacgcctgtggacgcagtgccagcgctgccagggcagc
ctgcacgaggacgtgctctgtaccaatcttgcccccaagggccccggcccccgcccggcc
cttggccctcccccggtcctggccaggcggggccgggcccttcccctaagggccggggcc
cgggtttccaccggcccaggggcgcgggtgacaggcgccagccccccgcccggccttatc
acccccacctag
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