Sarcophilus harrisii (Tasmanian devil): 100930008
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Entry
100930008 CDS
T02286
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100930008 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100930008 (DHX8)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100930008 (DHX8)
Spliceosome [BR:
shr03041
]
Complex C
Other components
Step II factors
100930008 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
TsaE
PhoH
ABC_tran
Sigma54_activ_2
Transformer
PIN_4
Cas3-like_C_2
Presenilin
Motif
Other DBs
NCBI-GeneID:
100930008
NCBI-ProteinID:
XP_003768199
Ensembl:
ENSSHAG00000009871
UniProt:
A0A7N4PDK8
LinkDB
All DBs
Position
4:338861535..338891308
Genome browser
AA seq
1195 aa
AA seq
DB search
MAEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLTK
NGAEFTDSLISNLLRLIQTMRPPAKLSANKDPVIKPKTEKEKLKDLFPALCRPDNPAIRT
MLDEDDVKVAVDVLKELDALKPSAAAQKQRGSEHRDRAKKKKRSRSRSRDRDHKRRHRSR
SRSRSRTRDRNKGKSRYRSRSRSQSPVKDRKDRDKYGEKSNDRWRDKHVDRPPPEEPSIG
EIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLS
FTGTKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDT
LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE
PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGL
NKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESL
PIFKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMS
VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLD
EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE
ILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVP
ELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVY
NSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNL
ASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL
EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTL
LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQK
AICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREV
TTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgggacccgccgaagagctcgccaaactcgagtacctgtccctggtctcc
aaagtgtgcaccgagctggacaaccacctgggcatcaacgacaaggacttagctgaattt
gtgataagtcttgcagagaaaaatacaacctttgacacatttaaagcttctctcaccaaa
aatggggctgaattcacagactctctcattagtaacttgttacgcctcatacagactatg
cggcccccagccaagctttctgctaacaaagatccagttattaagcccaagacagaaaag
gagaagctcaaggacctcttcccagcactttgccgaccagacaatcctgcaattaggacc
atgcttgatgaagatgatgtgaaagtagctgtggatgtcctcaaagagttagacgctcta
aagcctagtgctgcagcacagaagcagagaggctctgaacatcgtgatagggcaaagaag
aaaaaaaggagtcgtagtcgaagccgagacagagaccacaagcgaagacaccggtcccga
tcaagatcacgttctaggactcgagacaggaataaagggaaatctagatatcgatcaagg
agcagaagtcagagtcctgttaaagaccgtaaggaccgtgataaatatggggaaaagagc
aatgatagatggcgagacaaacatgtggaccggcctcctcctgaagagccttctattggg
gaaatttacaatggcaaagttaccagtatcatgcagtttggatgttttgtacaactggaa
ggactaaggaaacgatgggaaggtttagttcatatctctgagcttcgtcgggagggccga
gtggcaaatgtcgctgatgtggtgagcaaaggccagagggttaaggtgaaagtcctgtcc
ttcactgggaccaaaaccagcctgagcatgaaggatgtggatcaggatactggagaagat
ctgaatccaaaccgacggaggaaccttgttggggaaaccaatgaggagacttctatgagg
aaccctgatagacctactcacctctcccttgtcagtgctccagaagtggaagatgacact
cttgaaaggaaacgcctcacccgaatatcagatcctgagaagtgggagatcaaacagatg
attgcggccaatgtactttctaaagaagagtttccagactttgatgaagagacaggaatc
cttcctaaagtggatgatgaagaagatgaagatctggagattgaattggttgaggaagaa
cctccattcctgagaggacataccaaacaaagcatggacatgagccccattaaaattgtt
aagaatcccgatggctccttgtcccaagcagcaatgatgcagagtgctttggcgaaagaa
aggagagaactcaaacaggcccagcgtgaagcagagatggactccattcctatgggactc
aacaaacactgggtggatcctctgcctgatgtggatggaaggcagattgctgccaacatg
cggggcattggaatgatgcctaatgacatcccagaatggaagaagcatgcttttgggggc
aacaaagcatcttatggtaaaaagactcagttgtcaatcattgaacagagggagagtctt
cccatcttcaagcttaaagagcagcttgttcaggctgttcatgacaatcagatcctgatt
gttattggagagacaggttctgggaagacaacccagatcacacagtatcttgctgaggcc
ggttacacctccagggggaaaattggatgtacacaacctcgaagggttgcagcgatgtca
gtggccaaaagagtgtctgaagaatttggatgttgcttgggacaagaggtgggttacact
attcgttttgaagattgcaccagtccagaaacagtcatcaagtacatgacagatgggatg
ttgctccgggaatgcttgattgaccctgatcttactcaatatgcaatcatcatgttggat
gaggctcatgagagaacgattcacacagatgtgctctttggattgttgaaaaagacagta
cagaaacggcaagacatgaagctgattgttacttctgcaacattagatgctgtgaaattt
tcccagtatttctatgaagctcccattttcaccattccaggccgaacatatcctgtggaa
attctctacactaaagaacctgagacagattacttggatgccagtttgatcacagtcatg
cagatccatttaactgaaccaccaggtgacatcttggtgtttctgactggtcaggaagag
attgatacagcctgtgagattttgtatgaacgcatgaagtccctgggacctgatgtacct
gaattaatcatcctccctgtgtattctgccctaccaagtgagatgcagacccggatcttt
gacccggctcctcctggtagcaggaaggttgtaattgctaccaacattgctgagacatct
ctgactattgatggaatctattacgtggtggaccccgggtttgtgaagcagaaagtgtac
aactccaagactggaatcgatcagctggtggtgactcccatttctcaggcacaggcaaag
cagagagcagggagagcggggagaacagggcctggaaagtgttacaggctctacacggaa
cgtgcctaccgagacgaaatgttaaccaccaacgtgcctgagatccagagaactaattta
gccagcacggtgctctctctcaaggctatgggcatcaatgatttgctttcctttgacttc
atggatgctcccccaatggaaactctgattacagccatggagcagctgtatacgttggga
gccctggatgacgagggcctgctcacccgtctgggccgcaggatggcggagtttcccttg
gagccaatgttgtgcaaaatgctgatcatgtctgtacatctgggttgcagtgaggagatg
ctcaccattgtgtccatgctgtcagtgcagaatgtcttctacaggcccaaggacaaacaa
gcccttgcagatcagaagaaagccaaattccaccaaactgaaggtgaccacctcactctc
ttggctgtgtataattcttggaagaacaacaaattctccaatccctggtgttatgagaat
ttcatacaggctcgctctttgcgcagagcccaggacatccgtaaacagatgttgggcatc
atggatagacataagctggacgtggtgtcctgtggcaaggcaacagtccgtgtacagaaa
gccatttgcagtggtttcttccgaaatgcagccaagaaagacccacaggaaggctaccga
actttgattgatcagcaggtggtctacatccatccctctagtgcactcttcaacagacag
ccagaatgggtggtataccatgagctggtgctgaccaccaaggagtacatgcgggaggtc
accaccattgacccccggtggctggtggagtttgctccggcctttttcaaggtctcagac
cccacaaagctcagcaaacagaagaagcagcagcggcttgagcccctatacaaccggtat
gaggagccaaatgcttggaggatctcccgtgctttccggcggcggtga
DBGET
integrated database retrieval system
