Sarcophilus harrisii (Tasmanian devil): 100930114
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Entry
100930114 CDS
T02286
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04151
PI3K-Akt signaling pathway
shr04510
Focal adhesion
shr04512
ECM-receptor interaction
shr05145
Toxoplasmosis
shr05146
Amoebiasis
shr05165
Human papillomavirus infection
shr05200
Pathways in cancer
shr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100930114 (LAMB4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100930114 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100930114 (LAMB4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100930114 (LAMB4)
09162 Cancer: specific types
05222 Small cell lung cancer
100930114 (LAMB4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100930114 (LAMB4)
09174 Infectious disease: parasitic
05146 Amoebiasis
100930114 (LAMB4)
05145 Toxoplasmosis
100930114 (LAMB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
Motif
Other DBs
NCBI-GeneID:
100930114
NCBI-ProteinID:
XP_023360546
Ensembl:
ENSSHAG00000006366
UniProt:
G3VVW6
LinkDB
All DBs
Position
5:complement(152102426..152240649)
Genome browser
AA seq
1796 aa
AA seq
DB search
MKFHLTFFMHLVLFRLSKAQDECISGSCHPIVGDLLLGRSAQLTASSTCGLDGPQKYCII
GYLEGEQKCFICDSRYPYNPYTQANSHTIENVITTFESDRKKKWWQSENGLDNVSIRLDL
ETLFQFSHLIMTFKTFRPAAMLVERSVDYGQTWKIFRYFAKDCATSFPNIPSGQAQGVDD
LVCDSKYSDIEPSTEGEVVLKALDPSFEIENPYSPYIKDLVTLTNLRINFTKLHTLGDTL
LGRRPNDPLDKYYYALYDMVVRGRCFCNGHANKCGPTQDVRGDVFSPPGMVHGHCICQHN
TDGPNCERCKEFFHDVPWRPAEGLQDNACRSCNCNGHSERCHFDMSLYLSSNSVSGGVCE
DCQHNTMGQHCDQCKPLFYRDPFKEISDPHACIPCECDPEGSLSGGMCESYPDPVLGIEA
GQCFCKDNVEGPQCDQCKSGYYGLNANDPLGCQSCNCNPLGSVPFSTCDVVTGQCLCQQF
ATGPQCDECLVGYWGLKNNLHSCSPCDCDIGGAYSNLCSPNDGQCECRPHVIGHQCTEPE
PGYFFVPLDFYIYEAEDAMPISGSAPLILATALPECEVYFHKQEGSFTIDSGNIVLERNK
IQSSREQSEVTSTFDHVVIKDPILGKPVTWTGLGFSQVLSGTNLRFTINNIPYATNYAVA
ISYEPQSSADWTARMEILPSGPSRSEYCRHKAHLQEPQTLTLPASGRIALFATPVCLEPG
IQYSIDVHFSQPFIMNSQTHGHILIDSLGLIPQIDSVENFCSKHLDEHQVNNCIEIASKP
HHQILPDWCERLVVSISARIHNGAVACKCHPQGSIGSSCSKVGGQCQCKPHVTGRCCDRC
STGAYGLGHHGCHPCECHPQGSKSTICDQITGQCSCHRDIGGHRCDLCLPGYFGFPNCRP
CPCNGFAELCDPETGSCFNCRGFTAGLHCERCIDGYYGNPLSGKPCLPCQCPDVPSSNQY
FAHSCYQNSWNLEVICNCQEGYTGIQCDECSSGFYGNPKISGDLCLPCVCNNNIDGADPA
SCSRVTGECLKCLYNTHGPNCQFCKPGYFGSALTQNCRKCTCNPSGVNHTACAIGDTECL
CDPTTGSCPCLPNVIGLTCDQCAEGYWNLVPRRGCQICECDPQHSHSTHCDQFTGQCPCK
LGYGGKHCNKCEENYYGDPQVQCIECKCNKEGTQTAICDQETGSCLCRAGVMGHFCDRCA
RGHFQEFPTCLRCPLCFDQWDNEISSLSEAVQGLIRLAANLEDKRETLPGCNADFKRLED
SMSEAERIWKHPVFSSGEFLNVKDYHDSVRTQVDQISQQVNREYDFQDLNGTLVGIGKEV
DDLLEDLQKKVHLASHVSNSSIRDTSMIEKYYQMSLSAEQKINDTIFIIKQSENTKNDLL
TMIAGLTSKVNFSREKLKQIQTPDIQKLNEKVCGTPGNLSCILSPCGGALCKDADEHRIC
GGPNCNGSLSLSRDAAKRAEETDSMINNLTNQLQLSENQIRNITKLTQLTKTKALQLTEK
LESMKDQIEPEEQRIKALIHKAKDFLLDENVPPEDIEKVANHVLDLNLPITSQNLTKELD
KIDLLMKLCEDDQASGSSLKLKVTETQTLLEKSKDAEETVNTLEEMLKNLKGAESIQRQT
NSVVKQLTDEIQKMEMTILKAENFTNKTEGELEHISSQQSTLEDEISNLQTKILRTRDQA
FSVKAQAESAQDQANITEKDFIDLKKQFTILQNKTNAKGSKKGTLSKVKQLKEEAEKLAG
ETEEKMQRIKDLEKKIQVLNQAKQEKVNQLKQLENHVLAIKNEITTQENKYSTCHI
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcatctgaccttttttatgcatcttgtgctttttaggctctcaaaagctcaa
gatgagtgcatcagtggctcttgtcatccaattgttggtgatctcctactgggtcgcagt
gcccagcttacagcctcctctacctgtggattggatggaccacagaaatattgcatcata
ggctacttggagggtgaacaaaaatgtttcatttgtgattctagatatccatataatcca
tatacacaagccaacagccatacaatcgagaatgtcattacaacatttgaatcagataga
aaaaagaaatggtggcaatctgaaaatggtcttgataatgtcagcatcagactggaccta
gagacactgtttcagttcagccatcttataatgacttttaagacattccgacctgcagcc
atgttggttgagcgttctgtggactatggccaaacgtggaaaatttttagatattttgca
aaagactgtgctacatcttttcccaacatcccctctggccaagcacaaggagtagatgac
cttgtttgcgattccaagtattctgatattgagccctctactgaaggagaggttgtttta
aaagctttggatcccagctttgaaatagaaaatccctacagcccctacataaaggatcta
gtgactctaacaaatctaaggataaactttaccaaactacacactttgggggatacattg
cttggaagaagaccaaatgatccccttgataagtattactatgctctctatgatatggtt
gttcggggaagatgcttttgcaatggtcatgctaacaaatgtggccccacacaggatgtc
cggggagatgtcttcagcccacctggaatggttcatggtcactgtatctgccagcacaat
acagatggtccaaactgtgagagatgcaaggaattctttcatgatgttccctggaggcca
gctgaaggtctccaggataatgcttgcagatcatgtaattgtaatggtcactcggaacgc
tgtcactttgatatgtctctgtacctctcaagtaacagtgtcagcggtggagtgtgtgaa
gactgtcagcacaatactatgggacaacattgtgatcagtgcaaacccctgttttacaga
gaccccttcaaagaaatttcagatccccatgcttgcattccttgtgaatgtgatcctgaa
gggtcattgtctggtggtatgtgtgaaagttatccagatccagtcctgggaattgaggct
ggtcaatgcttttgtaaagataacgttgaaggacctcaatgtgaccagtgcaagtctggg
tattatggactgaatgccaatgatcctctgggttgtcaatcctgcaattgtaaccccctt
ggaagtgtaccattctctacctgtgatgtggttactggccaatgcttgtgccaacagttt
gctactggaccccagtgtgatgaatgtcttgttggatattggggacttaaaaataatcta
cacagttgttctccttgtgactgtgatattgggggtgcttatagcaacctgtgttcccct
aatgatgggcaatgtgaatgtcgtcctcacgttatcggccatcaatgcacagaaccagaa
cctggatatttctttgtgcctttggatttctatatatatgaagctgaggatgccatgccc
atctctggatctgcacctttgatactagcaacagccttacctgaatgtgaagtgtatttc
cacaagcaagaagggagtttcacaattgacagtggaaatatagttttggaaaggaataaa
atacaaagttcacgggaacagagtgaagtcactagcacttttgatcatgttgtcatcaaa
gatcctattcttggaaaacctgttacgtggacagggcttggattttcccaggttctcagt
gggaccaacttgagattcaccatcaacaatattccctatgctacaaactatgctgttgca
attagttatgagcctcagtcttcagctgactggacagcccgcatggagattctcccttct
ggaccttcaagaagtgaatattgcagacataaagcacacctacaagagcctcagactctg
accttaccagcttctgggagaatagcactatttgccacaccagtctgtctagaaccaggc
atacagtattctatagatgttcatttttctcagccatttattatgaattcacagactcat
ggacatattttgattgattcgcttggccttattcctcaaattgattcagtagagaatttc
tgcagtaaacatttagatgagcaccaagtaaacaactgtatagaaattgcttcgaaacct
catcatcaaattttgcctgactggtgtgaaagacttgtagttagcatatctgctaggata
cacaatggagcagttgcctgtaagtgtcaccctcagggctccatagggtcaagctgcagc
aaagtgggaggccagtgtcaatgtaaaccccatgtgactggacgctgctgtgatcggtgt
tccacaggagcctatggtttgggccatcatggatgtcacccatgtgagtgccatcctcaa
ggctccaagagtaccatatgtgatcagataacagggcagtgctcctgccacagggacatt
ggaggtcatcgctgtgatctgtgcttacctggttattttggatttcccaattgccgtcct
tgtccttgcaatggttttgcagaactttgtgacccagagactgggtcatgcttcaactgc
agaggatttacagctggacttcattgtgaaaggtgcatcgatggttactatggaaatcct
ctctctggaaaaccatgtcttccttgccagtgtcctgatgttccttcaagtaatcagtat
tttgcccattcctgttatcagaattcttggaatttagaagtaatctgcaactgtcaggag
ggttatacaggtattcagtgtgatgaatgctcaagtggtttttatggaaatccaaaaata
tcaggagacctttgcctgccatgtgtttgcaacaacaatatagatggagcagacccagca
tcctgcagcagggtaacaggagaatgccttaaatgtttatataatactcatgggcctaac
tgccagttctgtaaaccaggttactttggatcagcactcacacaaaactgcagaaaatgt
acttgcaatccttctggggtaaatcatacggcatgtgcaataggtgatacagaatgccta
tgtgacccaacaacaggatcctgtccttgcttgccaaatgtcataggtttgacctgtgac
caatgtgccgaaggatactggaatctggtccctaggagagggtgtcagatctgtgaatgt
gacccccaacattctcacagtactcattgtgaccagtttacaggccaatgcccttgtaaa
ttgggctatggtggaaaacactgcaacaaatgtgaggaaaattactatggagatccccag
gtgcaatgcattgaatgtaagtgtaataaggaaggaacacaaacagccatctgtgaccag
gaaactggttcctgcctgtgccgagcaggtgtcatgggccacttctgtgatcgttgtgcc
cggggtcatttccaggaatttcccacctgtcttcggtgtcccttgtgctttgatcaatgg
gacaatgagatttcttccctctctgaggctgtacaagggttaattaggttggctgcaaac
ttggaagataaaagagagaccctgcctggctgcaatgcagacttcaaacgcctagaagat
agcatgtctgaagcagagaggatttggaaacatcctgttttctcatctggggaattctta
aacgtcaaggattatcatgattctgttagaacacaggttgaccagataagtcaacaagtg
aatagagagtatgacttccaagatctgaatggaactttggtgggcattgggaaagaagtg
gatgatctactcgaagacttgcagaaaaaagtacacttggcctcccatgtcagcaattcc
agcatcagggatacctcaatgatcgagaaatattatcaaatgtcattatctgcagaacag
aaaattaatgataccatatttatcataaaacaatctgaaaataccaagaatgatttactt
actatgatagctggactaacctcaaaagtaaacttctcacgggaaaaattaaaacagatc
cagacaccagatatccaaaaattgaatgaaaaggtgtgtggaactccaggtaacttgtca
tgtattctttcgccctgtgggggagctctgtgtaaagatgcagatgagcacaggatttgt
ggaggtccaaactgtaatggttccctatccctttcaagggatgctgccaagagagctgag
gaaactgactctatgattaataatttgactaatcagctacaactatcagagaatcagata
agaaacataacaaaactaactcaacttactaagaccaaagccttgcagctaactgagaag
ctagagagtatgaaagaccaaatagagccagaagaacagaggataaaagccctcatccac
aaagcaaaggactttttgctagatgagaacgttccaccggaagacatagaaaaggttgca
aatcatgtccttgatctcaaccttccaataacttcacaaaatctaactaaagagcttgac
aaaatagatttgcttatgaaactctgtgaggacgaccaagcatcagggagcagcttaaaa
ctaaaagtcacagaaacacagacgcttttagagaaatctaaagatgccgaggaaactgtg
aacaccctggaagaaatgctgaaaaacttgaaaggtgctgaaagcatccaaagacaaaca
aactctgttgttaaacagctgactgatgagatacaaaaaatggaaatgacgatactgaag
gctgaaaatttcaccaataagacagaaggtgagctggaacacatatcaagccaacagtct
acactagaagatgaaatctctaacctgcaaaccaagatactaaggactcgagaccaggct
ttcagtgtgaaagcccaggcagaatcagctcaggatcaagctaatatcactgagaaggat
ttcattgacctaaaaaaacaatttacaattcttcaaaataagacaaacgctaaaggatcc
aagaaaggaacactcagtaaagtaaagcagctaaaagaagaagcagaaaaattggcagga
gagacagaggaaaaaatgcaacgaataaaagatttagaaaagaagatccaagtcttgaat
caagctaaacaagagaaagtcaatcaactaaagcaactagaaaatcatgttctagctatt
aaaaatgaaattaccacccaagaaaataaatattctacttgccacatctag
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integrated database retrieval system
