Sarcophilus harrisii (Tasmanian devil): 100930119
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Entry
100930119 CDS
T02286
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100930119 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100930119 (FIP1L1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100930119 (FIP1L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
100930119
NCBI-ProteinID:
XP_031798472
Ensembl:
ENSSHAG00000015789
UniProt:
A0A7N4NZ63
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All DBs
Position
6:37204963..37280246
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AA seq
584 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDETAENGISK
PKVTETEDDSESDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGAAGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLELIPNKITAEDYTMEVTPGAEIQDGRYNLFKVQQGRTGNAEKETVLQSAKAEFTSP
PSLFKTGLPPSRNSASSQSQTSSASRKANSGIGKWQDRYGRAESPDLRRLSGTIDVIGQT
ITISRVEGRRRANENSNIQVLSERSAAEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPT
VSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAF
PHLPGSAPSWPSLVDTTKQWDYYARREKDRERERERDRERDRDRDRERERTRERERERDH
SPTPSVFNSDEEQRYRYREYTERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRR
RHESEEGDSHRRHKHKKSKRSKEGKEAGNEPAPEQESTEATPAE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggggaggtggagcggctggtgtcggagctgagcggcggcaccggcggggat
gaggaggaagagtggctctatggcgatgaaaatgaagttgaaaggccagaagaagaaaat
gccagtgctaatcctccatctggaattgaagatgaaactgcagaaaatgggatatcaaaa
ccaaaggtgactgaaactgaagatgatagtgagagtgacagtgatgatgatgaagatgat
gttcatgttaccattggtgatattaaaactggagcaccacagtatgggagctatggtaca
gcacctgtaaatcttaacatcaagacaggaggaagagtttatggagctgcagggacaaaa
gtcaaaggtgtagaccttgatgcacctggaagcattaacggagttccactattagaagta
gatttagattcttttgaagataaaccatggcggaaaccaggtgctgatctttctgattac
tttaattatggttttaatgaagatacatggaaagcttactgtgaaaaacaaaagaggata
cgaatgggacttgaattaataccaaataaaattacggccgaagactatactatggaagtt
acaccaggtgcagagatccaagatggcagatacaatctttttaaggtacagcagggcaga
actggaaatgcagagaaggagacagtgctacagtctgccaaagctgagtttacatctcct
ccttctctattcaaaacaggacttcctccaagcagaaacagcgcctcttctcagtctcag
acaagttctgcctccagaaaagccaattcaggcatcgggaagtggcaggatcgatatggg
agggccgaatcacctgacttaaggagattatctggcacaatagatgtcattgggcagact
atcactattagccgggtagaaggaagaaggcgtgcaaatgaaaatagcaacattcaggtt
ctttccgaacgatctgctgctgaagtagacaacaattttagcaaaccacctccatttttc
cctccaggagctcctcctactcatctcccaccacctccatttcttcctcctcctccaact
gtcagcactgctccgcctcttattccccccccaggtattccaataactgtaccacctcca
ggttttcctcctcccccaggagctcctcctccatctctcataccaacaatagaaagtgga
cattcttctggatatgatagtcgttctgctcgggcatttccatacggcaatgttgctttc
cctcatcttcctggttctgctccttcatggcctagtcttgttgacaccaccaaacagtgg
gactactatgccaggagagagaaagatcgagagcgagaaagagaacgagaccgagagaga
gatcgtgatcgtgatagggaaagagaacgtaccagagagagagagcgagaacgtgatcac
agcccaacaccaagtgtattcaacagtgatgaagaacaacgatacagatacagggaatac
acagaaagaggctatgagcgtcacagagcaagtcgagaaaaagaagagcggcacagagaa
aggagacacagggaaaaagaggagacgagacacaagtcctcgcgaagtaatagcagacga
cgccatgaaagtgaagaaggggacagtcacaggagacacaaacacaaaaaatcaaaaaga
agcaaagaaggaaaagaagctggtaatgaacctgcccctgagcaggagagcactgaggct
acccctgctgagtaa
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