Sarcophilus harrisii (Tasmanian devil): 100930222
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Entry
100930222 CDS
T02286
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100930222 (SEC16A)
Membrane trafficking [BR:
shr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100930222 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
100930222
NCBI-ProteinID:
XP_012409480
Ensembl:
ENSSHAG00000006287
UniProt:
A0A7N4PYB2
LinkDB
All DBs
Position
2:489291158..489342435
Genome browser
AA seq
2431 aa
AA seq
DB search
MMQPPPQTVPSGTGGPPPVGGPRNMYWSHSPYSRRANAPVTAVAGPVQPVTDPFAFGRQT
PQGTALGSPSKGNSFVMQGPSPPMFSQPSGMHVPYTHAGDNSQGLYTSLSGPVSQPRVNT
DSFTNVLTPAVLPGHVMNSSAETHPTAEPGIQTPSVPSHYNPGAGLENSFGGHLQSGVPL
PCRPLSQQQDSNAGVPAPTTTSFFPQSHQQTPVQWRPVQGSPQSSVQNYSPYTEPSQSAV
PLASGSSHFLPQASMHQVPGHQQHVPLVSTSGPISERNEIVPSQNNNYAANNFQSENMFK
QNSGVNSSWPSQDFRQNLGVSKQHLPDPALLNPIAQGNSLENQPQYRTEAVSSHILPEAN
SGTITMFFKGDEAENEENLSSEKADATVKSDFDGLLPNSGHGGHHLPHPMQVGTSVPFQP
SVPKGSASESTQQGIEVQQYFSQSTSNQHDKQTTKNSDIYVNDDKACTVKTCGAVGSQYE
NIENLECIQNQEVLPSEPPNLNPSPNDQFRYGPGQSVSKHSIVSYAEGGPNLEAPDSIPH
PVRSDSVSSNYSNISHRSISSSARPQESVGTFIQQEVGKPNDETSDSFFKQIDSSPLVGE
ANDNINKNYHSNLSQPPTPSPPKPTGIFQTSANSSFEPVRSHGVGVKSIEADRANMIGEL
RENHSKQNNSKPTVTVPAASPGNLEQPPDNMETFFTPHAHPLPLTTTDEAVNVLPHGGGT
LLENVSMASEKRPSRAQGATKKCESPATTLWAQNELPNFGGNVLLAPAAPALYVPAKTRV
SEIIQPPDEGLSSLQPCKPGSIPIHPPQDVNVSSENLENPPKMGEEEALQSQASSGYASL
LSSPPTESLQNQPILIAQPNQSYNLTQPINFSMSLSNQLSHNENNHSCKDPAVGDKSTPN
SQPLCAGIPGESIPLSVTQATSSVNSPLPTNHSHTNFLQGPGTTSEMISNQSPNLLVQPP
SHQMPLNLVPEGQKNENSESLTSEYAIKPVVSLPASPGTNFPTGNTSVMLVPPVNSTLIP
HANKANLTSYQEETSGALDFTLNRTLESHSIDNSVRAHNTSHSGGPTFSQQLITNHKSLS
GPELHDKEHFYQQVTKDVQHQIALDKSQSESLPPQQQGSSAAQMPKTAASDSSNSGNQPD
LLPSGSSSQLLSQGKVEQQQQQLSQPCSIPTTSAPPGHPASQQEPQWAPSQTAHNAFGPP
QNVSAYYYYRHLYDAYQPQYPPPYPSDPRTASLYYPEDAYGPYDLRYRNYDKSAAYAENY
RYAEPERPSSRASHCSDRPSSRQGYPETYYASKGGWSSQSDYYANYYSGQYDYGDTNRWE
RYQYDPRFRDPRSYDRRYWYDTEHDHYRKEAYPYGDRPEKYDDHWRYDPRFTGSFDDEPE
PHRDVYDDDRRSIHSEHSAHSLHSTHSLQSRQSSFSSRSHQSQIYRNNDVTANSYERPAP
PGSLHGDYSYGVYGNNFSGAQGFTDYGYPAETGWPTSEQVPSRPTTPEKFSVPHVCGRFG
PGGHLIKVLPNLPSEGQPALVEIHSMETMLQHTSEQEEMRSFPGPLAKDDTHKVDVINFA
QNKATECLRNENLIDKESAGLLWDFIVLLCRQNGTVVGTDIAELLLRDHRTVWLPGKSPN
EANLIDFTNEAVEQVEEEESGEAQLSFLTDSLVTAIDSLEKETERFRELLLYGRKKDALE
SAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGD
EKWGDWRPHLAMVLSNLSNNMDVESRTIATMGDTLASKGLLDAAHFCYLMAQIGFGVYTK
KTTKLVLIGSNHSLPFLKFATNEAIHRTEAYEYAQSLGTQPCFLPNFQVFKFIYACRLAE
MGLAAQAFHYCEVISKTILKQPRQYSPVLISQLIQIASQLRLFDPQIKEKPEQESFIEPT
WLIQLQQLKRQIEEGDVIWNQDRATPHQYPSTPSSELEQYDGTEHSQEIGPGTDNPLLAS
LLPNTEQSNQNIRLMPSAPQTILENSGSIPTSFHQEKPDNIPFYPVPPGPIGHTPVYGSP
VSVPGFSDQYGPEHAAVYPGPNVSPGGQSLQVTDQLPEESRSQDTGRVPPESSIRNSISE
QREEDFGGKFANMAPGRRSRTTSQSSAHMEYSRKCQNTESYKGRERSNSAGQQPSPSTTF
ASEVKRPTKEVKKEVKETKKSGESWFFRWLHGKKKTEAYLPDDTNKSIVWDGKKQRWVNL
DEPEEESKPPPPPPTSFPKLSQVAAPPGPGGPPNASVNMFSRKAAGTKARYVDVLNPNGT
KQSGPVPAPSDLFAPLAPLPIPSNLFVPNSEEQPLENNDLEGQSPDAYHPDQEPSPESQL
LNSATLLPTSENSSSNMDGHQSGELSRCSSMSSLSREVSQHFNQPPNLPSSGGTTVGTVP
FYNPSQFAQPSAITVSSRLGRIGQRKYPTLK
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagccaccacctcagactgttccttctggaacgggaggaccacctcctgtagga
ggtcctcgtaatatgtattggtctcacagcccatacagcaggcgagctaatgcaccagtg
actgctgtagctggcccagtgcaacctgtaacagatccttttgcatttggcagacagact
ccacaaggaacagcattaggcagtccatccaaaggcaactcatttgttatgcaaggtcct
tccccaccaatgttttctcagccatctggtatgcatgtaccttatacccatgcaggggac
aattcacaaggactttatacatctttgtctggacctgtatcacaacctagagtaaatact
gactcatttacaaatgtattgactcctgctgtgctacctggacatgttatgaatagtagt
gcagaaactcatccaactgcagaacctggaattcagactccatctgttccttcacattat
aatcctggagcaggacttgaaaattcttttgggggacatcttcagagtggcgtgcctctg
ccttgtaggccactaagtcagcagcaagattcaaatgctggtgttccagccccaactaca
acatcattctttcctcaatctcatcagcaaactccagttcagtggagaccagttcaagga
agtccacagtcttcagttcagaattattcaccatataccgaaccatctcagagtgcagtt
cctcttgcttctggtagttctcattttcttcctcaagcaagtatgcatcaagttcctgga
catcaacaacatgttccattagtttctacatcaggacccatcagtgaaagaaatgagata
gtcccttctcagaataataactacgcagcaaataactttcagtctgaaaatatgtttaaa
caaaattcaggagttaatagtagttggcccagtcaggattttaggcagaatctaggagtg
agtaaacagcatttaccagaccctgctctgcttaatcccattgctcagggaaatagctta
gaaaaccaaccacagtatagaactgaagctgtaagcagtcacatactcccagaagcaaat
tcaggcactatcacaatgtttttcaaaggggatgaagcagaaaatgaggaaaatctttca
tcagaaaaagcagatgctactgttaaatctgactttgatggtcttctaccaaattctgga
catggaggccaccatcttcctcatcctatgcaggttggaacaagtgtcccttttcagcca
tcagttcctaaaggttcagccagtgagtctactcaacagggaatagaggtccagcaatat
ttttctcaatctacaagtaaccaacatgataaacaaaccactaaaaactctgacatttat
gttaatgatgacaaggcttgtactgttaaaacttgtggtgccgttggctcacagtatgaa
aatattgagaacttagaatgcattcagaatcaagaagttctaccaagtgaacccccaaat
ttaaatccttctccaaatgatcaattcagatatggaccagggcagtcagtttcaaagcac
agtattgtaagttatgctgaaggagggccaaatttagaggcacctgattcaatacctcat
ccggttcgatctgatagtgtatcctctaattatagtaatataagtcataggagtatttct
agttcagcaagaccccaagaatcagtcggcacatttattcagcaagaagttgggaagcct
aatgatgagacttcagatagtttctttaagcaaattgattcttctcctttagtaggagaa
gcaaatgataacataaacaagaattatcatagcaatctctcccagcctccaactccaagc
cctcctaaacctacaggaatatttcagacaagtgcaaatagttcttttgaacctgtaagg
tcccacggagttggagtaaaatctattgaggcagatcgagcaaacatgataggcgaactg
agagagaatcattccaagcagaacaatagtaaaccaactgttacagtaccagctgcatca
ccaggtaatttagaacaacctccagacaacatggaaacattctttacccctcatgcacat
cctttgcctcttacaacaactgatgaagctgttaatgtgcttccccatggtggaggaaca
cttttagaaaatgtgtccatggcatctgagaaacggccttcaagggctcaaggtgccact
aaaaagtgtgagagtcctgcaaccacattgtgggcacagaatgaactacctaactttgga
ggaaatgtccttcttgcaccagctgctcctgcactttatgtacctgctaaaacacgggtt
tctgaaattattcaacctccagatgagggattatccagtctgcaaccatgtaaaccaggc
tctattcctatacatccccctcaggatgtcaatgtgtcctctgaaaatcttgagaaccct
cccaaaatgggagaagaggaggcccttcagtctcaggcaagttctggttatgcaagttta
ttgtcctcaccacccactgaatctttacagaatcaaccaatcttgattgcccagcctaat
cagagctataatttgacccagcccattaatttttctatgtccttatctaatcaattaagt
cataatgaaaataatcattcttgcaaagatcctgcagtgggggacaagtctaccccaaac
agtcagcctctctgtgctggtatacctggggaaagtattcctttgtctgtgactcaagct
acatcttctgttaattcaccattacctaccaatcattcccatactaattttttacaaggt
cctggtaccacttctgaaatgatttctaatcaatctcccaacttactagttcaaccacca
tctcatcagatgccacttaacttggttccagaaggtcaaaaaaatgagaattcagaaagt
ttaacttctgaatatgctattaaaccagtggttagtttgcctgcttccccgggaactaat
ttccctactggaaacaccagtgtaatgttagttccaccagtgaacagcaccctaataccc
catgctaataaagcaaatctcaccagttatcaggaagaaacctctggagcccttgatttt
acactgaaccggactttggaaagtcacagtatagacaattctgttcgagcacataataca
tcacattctggtggtccaactttttctcaacaactcatcactaatcataaaagtctgtct
gggcctgaattgcatgataaagaacatttctaccaacaggtaacaaaagatgttcagcat
cagattgcccttgataaatcccagtcagaatccttacctcctcagcaacaagggtcatca
gctgctcagatgcccaagacagcagcatctgattcttcaaactctggaaatcaacctgat
ttgttaccatcaggaagttcatcccagctgctgagccagggtaaggtggagcagcagcag
cagcagctctcacagccatgtagtattccaacaacttcagctccccctggtcatccagct
agtcagcaagagccgcaatgggcaccatcacagactgctcataatgccttcggtccacct
cagaatgtgtcggcttattactattatcggcatctttatgatgcctaccaacctcagtat
ccaccaccctatccttcagatcctagaacagcttccctttattacccggaggatgcctat
ggcccatatgatcttcgttatagaaattatgataaaagtgctgcttatgcagaaaactac
agatatgctgagccagagcgtccaagttccagagctagtcactgctcagatcgaccatct
tccagacaagggtatcctgaaacgtattatgcttccaaaggtggatggagcagccagagt
gattactatgcaaattattattccggccagtatgattatggagacacaaatcgctgggaa
cggtatcaatatgatcccagatttagagatcccaggagctatgaccgaaggtattggtat
gatactgaacatgatcattataggaaagaagcatatccgtatggtgacagacctgaaaaa
tatgatgatcattggaggtatgatcctcgtttcactggaagttttgatgatgaaccagaa
cctcacagagatgtttatgatgatgataggcgtagtattcatagtgagcattctgcccac
agtctccatagtacccacagtctacagagccgccagagcagcttcagctcacgttctcat
caaagccagatttatagaaacaatgatgtaactgctaattcatatgaacgcccggctcca
ccaggctcccttcatggagattattcctatggtgtttatggtaataatttcagtggtgca
cagggttttacagattatggctaccctgcagaaacaggatggccaacttcagaacaagtt
ccatcaagaccaactacacctgagaaattttcagtgcctcatgtctgtggaagatttggc
cctggaggccatcttattaaagtgcttccaaacttgccttctgaaggacagccagctttg
gttgaaatacacagcatggagactatgttgcaacatacttctgaacaggaagagatgaga
tccttccctggacctcttgctaaagatgatacccataaagtggatgttataaattttgct
cagaataaagctacagaatgtttgcggaatgaaaatctaattgataaagaatctgcaggt
cttctttgggattttatcgtactattatgcagacagaatgggactgttgtgggaacagac
attgcagagcttttgctacgagatcacagaacagtgtggcttcctggaaagtcacccaat
gaggcaaacctgattgattttactaatgaagctgtggaacaagtagaagaggaagagtct
ggtgaagctcagctctcatttctcactgacagtttggtaacagctattgatagtcttgaa
aaagaaacagagaggtttagagagctgcttctttatggacgtaaaaaggatgctttggaa
tctgcaatgaaacatggcttatggggacatgctctgttacttgctagtaaaatggacagt
agaacacatgcaagagttatgaccaggtttgccaacagccttccaattaatgatccctta
cagactgtttaccagctcatgtctggaagaatgcctgctgcatctacatgttgtggagat
gagaaatggggagattggaggcctcatcttgctatggttttgtccaacttgagtaataat
atggatgtagagtcgaggacaattgccaccatgggggatactcttgcttctaaaggcctc
ttagatgctgcacacttttgctacctaatggcccaaattggatttggagtctacactaag
aaaactacaaaacttgtcctaattgggtcaaatcacagtttgccatttttaaaatttgca
accaatgaagctattcaccgaacagaagcctatgaatatgcgcaatcactgggaacccag
ccatgcttcttgcctaatttccaggtattcaaattcatctatgcttgtcgattggctgaa
atgggacttgctgcacaggcctttcattactgcgaagtcatttctaaaactattctcaaa
caaccacgccagtattcaccagtgctgattagccagctcattcagatagcctcccagtta
cgactcttcgatcctcaaataaaagagaaaccagaacaggaatcatttattgaacctact
tggttaatacagcttcagcagttgaagaggcagatagaggagggtgatgtaatttggaat
caggacagagcaacaccacatcagtacccaagtacaccaagctctgaactggagcaatat
gatggcacagaacatagtcaagaaattggcccaggaactgacaacccattattagcatca
ttgttgcctaatacagagcagtctaaccaaaacattcgccttatgccttcagctcctcag
accatccttgaaaattcaggcagtattccaacttccttccatcaagaaaaacctgacaat
ataccattctatccagtgcctcctggacctattgggcatacccctgtttatggatcacca
gtgtctgtacctgggttttcagatcagtatggtcctgagcatgcagccgtgtatccaggg
cctaatgtttctccaggtgggcagtctcttcaggtgacagatcaactgccagaagaatct
aggagccaggacacaggacgagtgccaccggaatcatccattagaaactctatttcagaa
caaagagaagaggattttggtgggaaatttgccaatatggcaccaggacgaagatccaga
actacctcccagtcttcagcacacatggagtattccagaaagtgtcagaacactgaatcc
tataaaggacgagaacgttctaactctgctgggcagcagccttctccctcaacaactttt
gcttcagaagtaaagagacccaccaaagaagtcaaaaaagaggtcaaggaaactaaaaag
agtggtgagtcttggttttttcgctggctacatgggaaaaaaaagacggaagcttatctg
ccagatgacacaaacaaatcaattgtttgggatggaaagaaacagcgctgggtgaattta
gatgagccagaagaagagagcaaacctccacctccacctccaacatcgtttcctaagctt
tctcaggttgctgctcctccaggtcctggtggccctccaaatgcctctgttaacatgttt
tccagaaaagcagctggaacaaaagctcgttatgttgatgttttaaacccaaatggaaca
aaacaaagtggacctgttcctgcaccctcagatttatttgctccgctggcaccacttcct
attccttcaaacttgtttgtaccaaattcagaggaacagccattggaaaacaatgatcta
gaaggtcaatcaccagatgcataccatcctgatcaagagccttctcctgaatcacagttg
ttaaactctgccacattgctacctacttctgaaaactcatcttcaaatatggatggtcac
cagtcaggagagctttcgcgctgtagttcaatgagttcattatcacgtgaagtaagccag
cattttaatcagcctcctaatctgccatcatcaggaggaactacagtgggaacagtacca
ttctataatccttctcaatttgcacaaccatctgccatcactgtaagttccagactggga
agaattggtcaaaggaaataccccacactgaagtag
DBGET
integrated database retrieval system
