Sarcophilus harrisii (Tasmanian devil): 100930278
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Entry
100930278 CDS
T02286
Symbol
CSF1
Name
(RefSeq) macrophage colony-stimulating factor 1 isoform X2
KO
K05453
macrophage colony-stimulating factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04010
MAPK signaling pathway
shr04014
Ras signaling pathway
shr04015
Rap1 signaling pathway
shr04060
Cytokine-cytokine receptor interaction
shr04061
Viral protein interaction with cytokine and cytokine receptor
shr04151
PI3K-Akt signaling pathway
shr04380
Osteoclast differentiation
shr04640
Hematopoietic cell lineage
shr04668
TNF signaling pathway
shr05010
Alzheimer disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100930278 (CSF1)
04014 Ras signaling pathway
100930278 (CSF1)
04015 Rap1 signaling pathway
100930278 (CSF1)
04668 TNF signaling pathway
100930278 (CSF1)
04151 PI3K-Akt signaling pathway
100930278 (CSF1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100930278 (CSF1)
04061 Viral protein interaction with cytokine and cytokine receptor
100930278 (CSF1)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
100930278 (CSF1)
09158 Development and regeneration
04380 Osteoclast differentiation
100930278 (CSF1)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
100930278 (CSF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
100930278 (CSF1)
05022 Pathways of neurodegeneration - multiple diseases
100930278 (CSF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
shr04052
]
100930278 (CSF1)
Cytokines and neuropeptides [BR:
shr04052
]
Cytokines
CSF and other factors
100930278 (CSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
DUF4381
Motif
Other DBs
NCBI-GeneID:
100930278
NCBI-ProteinID:
XP_012405027
Ensembl:
ENSSHAG00000004151
UniProt:
A0A7N4Q1H4
LinkDB
All DBs
Position
4:411815202..411836887
Genome browser
AA seq
560 aa
AA seq
DB search
MTPRGAGGNCPLTIWLGCWLLLPCLLVWSLPTYGPETCDHLIGEGHLMKLQQLIDSQMET
SCHITFKFADRDQLKDSICYLKKAFPLIQDIFEEIIRFKDNSSNYNASRDLHELYLRLRD
AGCVTREHEERDEACVRTFNNTPVQILEKVQNIFVETNRLLKDDWRIFDRDCTSSFAKCV
SSDVVTKPDCNCLSPRTTPSSKLASVPIHSSLSPSTAPVANLAWGDSEGTEGKPLVPSDL
PPQTTAQGSARRRVPRSTCGSVEAMETAGTLSASQSLVGSEMEPGSNKSPPDLSDSPRIK
GLLNSALDTDSALGDASGDVSPGSQETEAPLFLLGGGPIQTGTTDPDELLATPSTPVLAQ
GPLAQVRNDHLQNEGSTPLAGQARDYSSEEMDGGIQGLSSPTTQLLHSEETQGISNLPAQ
PRFPRSLSWGVPRPPKELEGKRSTRVRRSPAKLEGGRGGQGLEREEGPGGPHKGFNSLPL
TDTGPERQNMGSPVLQFQGSDFWVLIAGILLVLLAVGGLLFYKQRQRNRQELQPAEILLE
QPEIRSPLNQEEDRQVEMPV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaccccacggggcgcaggcgggaactgcccactcacgatatggctgggctgttggctt
cttctgccttgtctcctggtctggagtcttcccacctatgggccagaaacttgtgaccat
cttattggggaaggtcacctaatgaagctgcagcagctgattgacagccagatggaaaca
tcctgccacattacctttaaatttgcagaccgggaccagctgaaagattccatctgctac
cttaagaaggcatttcccctgatccaggacatttttgaggaaatcattcgcttcaaggac
aattcttccaattacaatgcctccagggatctgcatgagctctacctgaggctgagagat
gctgggtgtgtcaccagggagcatgaggagagagatgaggcctgtgttaggactttcaac
aacacccctgtccagatattggagaaggtccaaaatatctttgtagaaaccaatagactc
cttaaggatgattggcgtatctttgaccgtgattgcaccagtagctttgccaaatgtgtc
agttcagatgtggtgaccaagcctgattgcaactgcctgtcccccagaaccacccctagc
agtaagctggcctctgtccccatccatagctccctctctccctccacagccccagtggcc
aacttggcctggggagactctgaggggacagagggcaaacccctcgtgcccagtgacctg
ccacctcaaacaacagcccagggcagtgccaggcgccgagtcccccggagcacctgtgga
agcgtggaggcaatggagactgcgggcacgctctctgcttcccagtccctggtgggatct
gagatggagcccgggagcaacaagtctccccctgacttgtccgattcccctaggataaag
ggccttctcaactctgcactcgacactgactcagctctaggggatgcctcaggtgatgtc
agccctggttctcaagaaacagaggctccccttttcctgttgggagggggacctatccag
acagggaccacagatccagacgagctcctcgccactccctcgacgcctgttcttgcacag
ggaccgctggcccaagtgaggaatgaccacctgcagaatgagggcagtaccccactggct
ggccaggccagagattattcatcagaggagatggatggaggtatccagggcctgagctca
cccactacccagctgctgcactctgaggaaacccagggcatctccaacctccctgctcag
ccccgtttccccagaagcctctcctggggtgtcccccgacccccaaaggagctggagggc
aagagaagcactagggtccggagaagccctgccaagctggaaggaggaagaggaggtcaa
ggtttggagagagaagagggcccaggcgggccccacaagggctttaactcgcttcctttg
actgacacaggccccgagaggcagaatatgggaagccctgtccttcagttccagggttct
gacttctgggtcctgatagccggcattctcctggtcctcctagcagtgggcggcctcctg
ttctacaagcagaggcagcggaaccgacaggagctacagccagcagaaatacttttggaa
cagccagagatcagaagccccctgaaccaggaagaggacagacaggtggagatgccagtg
tag
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