| Entry |
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| Symbol |
SMARCC1
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| Name |
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
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| KO |
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
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| Organism |
shr Sarcophilus harrisii (Tasmanian devil)
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| Pathway |
| shr03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:shr00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100930330 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100930330 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100930330 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:shr03021]
100930330 (SMARCC1)
03036 Chromosome and associated proteins [BR:shr03036]
100930330 (SMARCC1)
Transcription machinery [BR:shr03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100930330 (SMARCC1)
Chromosome and associated proteins [BR:shr03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100930330 (SMARCC1)
PBAF complex
100930330 (SMARCC1)
GBAF(ncBAF) complex
100930330 (SMARCC1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(91019162..91177688)
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| AA seq |
1107 aa
MAAAAGGGGGGAPGTVTGGAGPGGAAAAAVGLALCRRKDGGPAGKFWESPETVSQLDSVR
VWLGKHYKKYVQADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGG
TLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPNIYLIPDI
ELKLANKLKDIVKRHQGTFTDEKSKASHHIYPIPTSLEDEDWLRPVMKKDKQVLVHWGFY
PDSYDTWVHASDVDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDENKKPVSF
RQRISTKNEEPVRSPERRDRKASASTRKRKHSPSPPPPTPVESRKKTGKKGQTSLYGKRR
GQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEEAV
TAGGKEDEDPSKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFN
GKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVN
YQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRTPQVPAAQQMLNFPEKNKEKPTDL
QNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDE
CILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAK
AALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLDGT
EEEKMETETDGQQAEKVENKSENETDENEKTQDGENEKSIEKEQDSEVNEDTKSEEKDGE
ENKENDACKERENDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQ
MEQQQHGQNTQQSHQHSGGPGMNPIGAPGHPGMLPHQQPPPYPMMHHQMPPPHPPQPGQM
PGPGSMMPGQPMPGRMIPAVAANIHSSGGGPPPPVMPPMPGNIIGPRVPLAAPNGMYPPP
PQQQPPPPPPTDGVTPPPAAAPASSAP |
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| NT seq |
3324 nt +upstreamnt +downstreamnt
atggccgcggcggcgggcggaggcggcggcggcgccccggggacggtgacgggcggcgcg
gggccggggggggcggcggcggcggccgtgggtctggcgctgtgtcggaggaaggacggg
ggcccggcgggcaagttttgggagagcccggagacggtttctcagctggactcggtgcgg
gtctggctgggcaagcactacaagaagtatgttcaagcagatgctcctacaaataaaact
ttggctgggctggtagtacagcttctacaatttcaagaagatgcctttgggaaacatgtc
accaatcctgccttcactaagcttcctgcaaagtgcttcatggatttcaaagccgggggt
accttgtgtcacatccttggggctgcttacaagtataaaaacgaacagggatggagaaga
tttgatctgcagaatccttcccgaatggatcgcaatgtggagatgtttatgaacattgaa
aaaacactggttcagaacaactgtctgagcagacctaacatctacctcattccagacatt
gaactgaagttggctaacaaactaaaggacattgtcaaacgacatcagggaacattcact
gatgaaaaatcaaaagcctctcatcacatttatcctattcctacctcactggaggatgaa
gactggttgagacctgtgatgaaaaaagacaagcaggtgctagtacattggggattttac
ccagacagctacgatacttgggttcatgctagtgatgttgatgctgaaattgaagatcct
cccattccagaaaaaccgtggaaagttcatgcaaaatggattttagacactgatatcttt
aatgaatggatgaatgaagaagattatgaggtggatgaaaacaagaaaccagttagtttt
cgtcagcgcatttcaacaaagaatgaagagccagtccgtagtcctgagagacgagatagg
aaggcatcagcaagtacaagaaagagaaaacattcgccttctcctccacctcctactcct
gttgaatcaaggaaaaagactggaaagaaaggacaaactagtctctatgggaaaaggcga
ggtcagaaagaagaggatgaacaagaagatctcactaaggatatggaagatccaacacct
gtacctaacatagaggaagtggtacttcctaaaaatgtgaatccaaagaaagacagtgaa
aatacaccagttaaaggaggaacagtagcagatctagatgagcaggatgaagaagcagtg
acagcaggaggaaaggaagatgaggatcccagtaaaggtgatcaaagtcgatcaattgac
ccaggtgaagataatgtaacagagcagacaaatcatattattattccaagttatgcttca
tggtttgattacaactgtattcatgtaatagaacgtcgtgctcttcctgaatttttcaat
ggaaaaaacaaatctaaaactccagaaatatatttggcataccgtaatttcatgattgac
acatatcgcttaaaccctcaagaatatttgaccagcactgcttgtaggcggaatttgaca
ggagatgtttgtgctgttatgagggttcatgcttttctagaacagtgggggcttgttaat
taccaagttgatccagaaagtagacctatggcaatgggacctcctccaactcctcacttt
aatgtgctagctgataccccttctgggctagtgcctctccatctcagaacacctcaggtc
cctgctgctcagcagatgttgaattttcctgagaaaaataaggagaagcctactgactta
cagaactttggtctccgcacagacatttactctaagaaaaccttagcaaaaagtaaagga
gccagtgctggaagagagtggactgaacaggagacactgctgcttttagaggccctcgag
atgtacaaagatgattggaataaagtatcagaacatgttgggagtcgaactcaggatgag
tgcattctccactttctgagacttcctattgaggatccttatcttgagaactcagatgcc
tcccttggacccctggcttatcagcctgtccctttcagtcagtcaggaaacccagtgatg
agtacagttgcatttttggcatctgtggtggatccacgggtagcatctgcagcagctaaa
gctgcattagaggagttttcccgggtccgggaagaagtaccattggaattagttgaagct
catgtcaagaaagtacaggaagcagcaagagcctctggaaaagtagatccaacgtatggt
ctagaaagtagctgcattgcaggcactggtcctgatgagccagagaaacttgatggtact
gaagaagaaaaaatggaaactgagacagatggacaacaggctgaaaaggttgaaaacaaa
agtgaaaatgaaactgatgaaaacgagaaaacacaggatggagaaaatgagaaaagtatt
gagaaagaacaagatagtgaagttaatgaggataccaaatcagaagagaaggatggtgaa
gagaataaggaaaatgacgcctgtaaagagagagaaaatgatactggaaagaagaaagtg
gaacatgaaatttctgaaggaaatgtagccacagctgcagcagctgctcttgcctctgct
gccaccaaagcaaagcaccttgctgctgtagaagaaagaaaaatcaaatctctggtggcc
ctgctggtagagacacaaatgaagaagctggagataaaactccgtcattttgaggaactg
gaaacaatcatggatagggaaaaggaagctttagaacagcagagacagcagttactcact
gaacgccagaactttcacatggagcagctaaaatatgctgaattaagggctcgacagcaa
atggagcagcagcagcatgggcagaacactcagcagtcccaccagcattctggaggacct
ggtatgaacccaattggagcaccagggcatccaggaatgttacctcatcagcagccccct
ccttatcccatgatgcatcatcagatgccccctcctcatccacctcaaccaggtcagatg
ccaggtcctggttccatgatgcctggacagcccatgccaggtcgtatgattccagctgtt
gcagctaacatccattcttctgggggtggtcctcccccacctgtcatgccaccaatgcct
gggaacatcattggaccacgagtaccccttgcagcacctaatggcatgtacccccctcct
ccgcagcaacagcccccaccacctccgcctaccgatggtgtcactcctcctcctgcagca
gcaccagcctcctcagctccctaa |
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