Sarcophilus harrisii (Tasmanian devil): 100930397
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Entry
100930397 CDS
T02286
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04613
Neutrophil extracellular trap formation
shr05014
Amyotrophic lateral sclerosis
shr05034
Alcoholism
shr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100930397 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100930397 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100930397 (HDAC6)
09165 Substance dependence
05034 Alcoholism
100930397 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shr01009
]
100930397 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100930397 (HDAC6)
04131 Membrane trafficking [BR:
shr04131
]
100930397 (HDAC6)
03036 Chromosome and associated proteins [BR:
shr03036
]
100930397 (HDAC6)
Enzymes [BR:
shr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100930397 (HDAC6)
Protein phosphatases and associated proteins [BR:
shr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100930397 (HDAC6)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100930397 (HDAC6)
Membrane trafficking [BR:
shr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100930397 (HDAC6)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100930397 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100930397
NCBI-ProteinID:
XP_031800957
Ensembl:
ENSSHAG00000001040
LinkDB
All DBs
Position
X:complement(82134765..82143566)
Genome browser
AA seq
1032 aa
AA seq
DB search
MASQPEKPGLNPSPSGTRMTGQKRGGRKGSPAPRPSPGLAEARRRGRAKKLSQVSEQELV
TNLQDLDLETESEIPSGTGLVLDERMGSFRCPWDDSFPERPERLQAVQQQLSRDCLLERC
IPIEAQPATPQELQLVHSQEYVDLMSSTPDMTQMERRALSDTYDSVYLHPNSFPCALLAT
GALLRLVDALMGGDIRNGLALVRPPGHHAQRDSMNGYCMFNNVAIAARYAQKKHHVPRVL
IVDWDVHHGQGTQFIFEQDPSVLYFSVHRYEQGRFWPHLKASDWRATGNGKGQGYTVNVP
WNQVGMRDGDYISSFLHVLLPIALEFQPEIVLVAAGFDAVLEDPKGEMAVTPGGFAHLTH
LLMSLAKGRLILSLEGGSLVPSRVVPLQTLLGDPCPLLETPCIPCFRICDPLTPPPLITE
PAPDDLKEDYRDMNIGPMPDLEMLGKPLDQGLPMAMNRTGLVYDARMMEHFNMWDSHHPE
RPERIAHIAQRHLELGLTPRCVPRPPAPTRRQLHSEEYIDRIRATSRLKPRDLHREGENY
NSIYLSSQSFACAQLAAGAACRLVEAILTGEVHNGLAIVRPPGHHAERDAACGFCFFNSV
AVAARHAQDMVGRALRILIVDWDIHHGNGTQHIFEEDPSVLYVSLHRYDHGTFFPMAEDA
ASKCVGRGRGEGFTVNVAWNGPRLGDSDYLSAMHHIVMPIAYEFNPELVLVSAGFDAARG
DPLGGCLVSPEGYAHMTHLLMGLAGGHVALVLEGGYNLSSISDSMAACTRTLLGDPPPLF
PWLRPPLPGTFVTLAEVAQVHQKYWQCLRLTVDTEEEEEEEETSLQPAEEESALRQRPPE
ESPPVVLTIGPKLEEQPPSPTSEETLGLESLRLGTHVSGEPEAEPTVSKEEDHEDPGLLG
EAAGGGTPMVGDEFAAEGTVFYAVTPLAWCPHLMTVRSVPEGGLDATQACQDCGTHMENW
LCLSCYQVHCGRYIQAHMLQHHEASGHPVVLSYADLSVWCYACQAYVNHEVLTEAKNTAY
LSKFGEEMPGVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccagcccgagaagccaggcctgaatccttcaccctcaggcacccggatgacg
gggcaaaagaggggcggccggaaggggtcgcctgccccgcggccgagcccgggtttggct
gaggcccgacgcagagggcgagcaaagaaattgagtcaagtgtctgagcaagagctggtg
accaacctgcaggacctagacctcgagaccgagtcagaaataccctctgggacaggccta
gtgctggatgagagaatgggcagcttccgctgcccctgggatgacagtttccctgaacgt
ccagaacgccttcaggccgtgcagcaacagctgtcccgggactgtctgcttgagcgctgt
atccccatcgaggcccagccagccactccccaggagctgcagcttgttcacagccaggaa
tacgtggacctaatgtcatccaccccagacatgactcagatggagcgtcgggccctctcg
gacacctatgattctgtgtacctacacccgaactcgttcccttgtgccctcctggctacc
ggggcactgcttcggctggtggacgccctcatgggaggcgatatccgaaatggactagct
cttgtcaggcctcctggccatcatgcccaacgtgacagcatgaacggctactgcatgttc
aacaacgtggccattgccgcccgttacgcccagaaaaagcaccatgtcccacgggtactc
attgtggattgggatgtccaccacgggcaaggcacacagttcatcttcgagcaggacccc
agcgtcctctacttctctgttcaccgctacgaacagggccgattctggccccacctaaaa
gcttctgactggcgggcaacgggcaatggcaagggtcagggatacacagtcaacgtgcct
tggaaccaggtggggatgagggatggggattacatcagctccttcttacatgtgctgctg
cccatcgctctggagtttcagcccgagatcgtcctggtggccgctggctttgatgctgtt
ctggaggaccccaagggagagatggcagtcactccaggggggtttgcccacctcactcac
ttgctcatgagtctggctaagggaaggctgattctgtctcttgagggtggctccttggtt
ccttctcgggtcgtccctctccagaccctcctgggagacccatgtcccttgctggaaaca
ccttgcatcccctgcttcagaatctgtgatcctttgaccccacccccactcataacagaa
cctgcccctgatgacctaaaggaagattaccgggacatgaacataggccccatgcctgat
ctcgagatgctggggaagcccctggaccagggcctgcccatggccatgaaccgaacgggc
ctggtgtatgacgccaggatgatggagcatttcaacatgtgggacagccaccacccggag
cggcccgaacgcatcgcccacatagctcagcgccacctggagctcggcctgacgcctcgc
tgtgttccccgcccccccgcgcccacccggcgccaactccacagcgaggagtacatcgac
cggattcgggccacgagccgcctgaagccccgtgacctgcaccgggagggcgagaattac
aactccatctacctgtcctcccagtccttcgcctgtgcccagctggctgctggagccgct
tgccgtttagtggaggccatcttgaccggggaggtgcacaacgggttggccattgtccgc
ccaccgggccaccacgctgagagagatgccgcctgtggtttctgcttcttcaattccgtg
gccgtggccgctcgccacgcccaggacatggttggccgagcccttcgaatcctgattgtg
gactgggacattcatcacggcaatgggacacagcacatatttgaggaggacccgagcgtg
ctctacgtgtccctgcaccgctatgaccacggcaccttctttcccatggccgaggatgct
gctagcaaatgtgtgggccggggccggggcgagggcttcaccgtcaacgtggcgtggaac
gggccccggctcggagactccgactacctcagtgccatgcaccatatcgtgatgcccatc
gcctacgagttcaacccggagctggtgctggtgtctgccggtttcgatgctgctcgcggg
gaccccctgggaggctgcctggtctccccggagggctatgcacacatgactcacctgctg
atggggctggccggaggccacgtggctctggtcctcgagggtggctacaacctaagctcc
atctcagactccatggctgcttgtactcggacccttctgggcgacccgcccccgctgttc
ccttggctccggcccccgttgcccgggaccttcgtcacgctggccgaggtcgcccaggtc
caccagaagtactggcagtgccttcggcttactgttgacacagaggaagaagaagaggaa
gaggagacctccttacagccggctgaggaggagagcgccctgaggcagaggcctcccgaa
gagagccccccagtggtgttgaccataggaccaaagctagaggaacagcctccgtccccc
acgtccgaggagaccctgggcctggagtccctgcggctcgggacccacgtttctggggag
ccggaggccgagcccaccgtttccaaagaagaggaccatgaggatcctggcctgctcggg
gaggcggctgggggagggaccccaatggtgggggatgaatttgctgctgaggggaccgtg
ttctatgctgtgaccccattggcctggtgtccacacctgatgaccgtgcgctcggtgccc
gaggggggcctggacgcgacccaggcgtgccaagattgcggcacccacatggagaactgg
ctctgtctgtcttgctatcaggttcattgtggacgctacattcaggctcacatgctccaa
caccacgaggcctcgggccacccagtggtcctcagctacgccgacctgtcggtctggtgt
tacgcttgccaggcctatgtgaaccatgaggttctgacggaagccaagaacaccgcgtac
ctgtccaaatttggggaggagatgccaggggtgctgtga
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integrated database retrieval system
