Sarcophilus harrisii (Tasmanian devil): 100930424
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Entry
100930424 CDS
T02286
Symbol
NECTIN3
Name
(RefSeq) nectin-3
KO
K06592
poliovirus receptor-related protein 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecule (CAM) interaction
shr04517
IgSF CAM signaling
shr04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100930424 (NECTIN3)
04517 IgSF CAM signaling
100930424 (NECTIN3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100930424 (NECTIN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100930424 (NECTIN3)
04090 CD molecules [BR:
shr04090
]
100930424 (NECTIN3)
Cell adhesion molecules [BR:
shr04515
]
Immunoglobulin superfamily
Nectin family
100930424 (NECTIN3)
CD molecules [BR:
shr04090
]
Proteins
100930424 (NECTIN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
ig
V-set
I-set
Ig_2
Ig_6
Ig_5
C1-set
Ig_PVRIG
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
100930424
NCBI-ProteinID:
XP_031817139
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Position
3:290541745..290715774
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AA seq
519 aa
AA seq
DB search
RRAGRRGEGWGDGADLAAGSAVPRRRQSTTFPASPPGARLLRPPPPLLLLLLFPLLFSRF
CGALAGPIIVEPYVTAVWGKNVSLKCIIEVNETITQVSWEKIQGKSSQTVAVHHPQYGFS
VQEAYQGRVLFKNHSLNDATIILRNIDFSDSGEYICKAVTFPLGNAQSTTSVTVLVEPTV
TLKKGPYPLIDGGNETVAAICTAATGKPVAQISWEGDLGEMESTVTSFPNETVTIVSQYK
LIPTKFARGRRITCVVKHPALEKEIRYSFMLDIQYAPEVSVTGYDGNWFVGRMNVNLKCN
ADANPPPSQSKWSRLDGQWPDGLETSENTLYFINPLTYNYSGVYICKVTNSLGQRSAQKI
IYILDVPFKQTSSIAVAGAVIGAVLALFIITIFVTVLLTPRKKRPSYLDKVIDLPPTHKP
PPVYEERSLPVPQNEITHQKEHFPLQSQYKKREIGSFQHTTVVNGRQFDYEDEHPEGQDG
LQQIYPLCRQICYKDWSCEKHQQSSDTGRSYVNPQEHYV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
aggcgggccgggcgccggggggagggttggggggatggcgcggacctcgcggccggctcc
gccgtaccccggaggcggcagagcacaactttccccgcttctccccccggagcccggctc
ctccggccgccgccgccgctgctgctgttgctgctcttcccgctgctcttttcccggttc
tgcggggccttagctggaccaattattgtggaaccatatgtcacagcagtgtgggggaag
aatgtttcattgaagtgtataattgaagtaaatgaaactataacacaggtttcctgggag
aagattcaaggcaaaagttcacagactgtggcagttcatcatcctcaatatggattctct
gttcaggaagcctatcaggggagagtcttatttaaaaaccattcacttaatgatgcaaca
attattctccgaaatatagacttctcagattctggagaatatatatgtaaagcagttaca
ttcccattaggaaatgcacagtcaactacaagtgtaactgtactggttgaacccaccgtg
accttaaaaaaaggaccgtaccctttaattgatggtggaaatgaaacagtagcagccatt
tgtacagcagccaccggaaaaccagttgcacagatttcttgggaaggtgatcttggtgaa
atggaatccactgtaacgtcttttccaaatgagactgtgacaatcgtaagccaatataaa
cttataccaaccaaatttgcccgaggaagacgtattacttgtgttgtgaagcatcctgca
ttagaaaaggaaattcgatattcttttatgctggatatacagtatgctcctgaagtttca
gtcacaggatatgatggaaattggtttgttggaagaatgaatgttaatctcaaatgtaat
gcagatgcaaatccaccaccttcacaatctaaatggagcagattggatggacagtggcct
gacggtttagagacttcagagaatactctgtattttatcaatccattaacttacaattac
tccggggtttatatctgtaaagttacaaattcccttggccaacgaagtgcccaaaaaatc
atctacatattagatgttccatttaagcagacctcttccatagcagtagctggagcagtc
attggagctgtccttgcgctttttatcattactatctttgttactgtgttgctgactcct
cggaaaaagaggccatcctatcttgacaaagtgattgatcttccacccacacataaacca
cctcctgtgtatgaagaaagatccctccctgtgcctcaaaatgaaatcactcatcagaaa
gaacactttcctttgcagagtcagtacaaaaaaagagaaataggcagctttcagcatact
actgtagtgaatggcagacagttcgactatgaagatgaacatccggaggggcaagatggg
cttcagcagatatatcccctttgccgtcagatatgttacaaagactggagctgtgagaaa
catcagcaaagctcagatactggaaggtcctacgtcaacccacaagaacattacgtgtga
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