Sarcophilus harrisii (Tasmanian devil): 100930494
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Entry
100930494 CDS
T02286
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03030
DNA replication
shr03410
Base excision repair
shr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100930494 (POLE)
03410 Base excision repair
100930494 (POLE)
03420 Nucleotide excision repair
100930494 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shr03032
]
100930494 (POLE)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100930494 (POLE)
Enzymes [BR:
shr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100930494 (POLE)
DNA replication proteins [BR:
shr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
100930494 (POLE)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
100930494 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
100930494
NCBI-ProteinID:
XP_003760963
Ensembl:
ENSSHAG00000009616
UniProt:
G3W6W8
LinkDB
All DBs
Position
1:complement(673703116..673765542)
Genome browser
AA seq
2288 aa
AA seq
DB search
MVSRERGWRRAEPGEEVENSRDDGSSSTSLSALKRLERSQWTDKMDARFGFERLQEPEEK
TGWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALTYKPYFYIATRKGCEREVSSF
LSKKFQGKIAKLETVPKEDLDLSNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVKKNRE
RDNTSDTYTAMLSSALMGGSVTTDEEGASKKIADQLDNVVDMREYDVPYHIRLSIDLKIH
VAHWYNVRYRGSSLPIEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
VDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIM
VTYNGDFFDWPFVEARAAVHGLSMHQEIGFQKDSQGEYKSSQCIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEFNKLTEDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEENVPIDQVTNFQEV
CDEIKNKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVNEATCAACDFNKP
GANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDKPARAFHELSREEQAKYE
KKRLADYCRKAYKKIHITKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAMEMGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNI
MVKEGFTNDQYQELTEPTSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNTLEEVYGSVAKVADYWLDVLYS
RAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFI
ISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLMEKHDIYKQKKISELFIHEGKRQVTINQ
HPEGSQGHGILDMEDLGVTKPLQPAVPIATKRKRVPIESQEESQNLELTQSWREILGQPP
SLGTTKEEWLVWLSFHKKKWELQARQRQERRKKRRVETKDRVLSSGVIRDGPTTGLGHFL
RRTARSILDLPWQIVQISETSQPGLFRLWAVIGNDLHCIKLNIPRVFYVNQRVPKEEDGS
SFRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRALI
QLGCVCMVSRQLVQHLTGREAETFSLEYLEMRSLAQFSYLEPGSIRHIFLYHHSQGSKAL
FGLFIPSQRKASVFVLDTVRSNQMPNLNSMYSSEHRLLLEKVGPDLLPPDKHIFEVRAET
DLKTIYRAIQRLLLGYKEERRGPTLIAIQSNWELKRLTTGMPVFEEFPLVPVCVTDDISY
GALDWQRHAARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFSRHLRH
HNHLLWFSPTSRPDLGGKEADDNRLVMEFDDQASVEINNPGCYSTVCLELDIQNLAVNTI
LQSHHVNDMEGASSMGISFDVIQQASLEEMVTGNQAANIPASYDETALCSNTFRILKSMV
VGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLSMMKKLFLQLVAEFKRL
GSSVIYANFNRIILCTKKRRIEDAIAYIDYITNSIHSKEIFHSLTISFSRCWEFLLWMDP
ANYGGIKGKVPSHVHYGEQNTQKEQTAEKEQESEEEEEEEEEEAEEEMIEESNVEDLLDN
NWNIVQFLPQAASCQSYFLMIISAYIVAVYHSMKEELRRSAPGCTPVKRRGNSQLSQEAD
GVAGALPGMITFSQDYVANELTQNFFTITQKIQKKVMGSRNSTEPSEMFPVLPGSHLLLN
NPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVIC
RNCNFCRDLDLCKDPSLSQDTSILPQWLCPNCQTAYDTAHIEMALVEVLQKKLMAFTLQD
LICLKCKGVKEANMPIYCSCAGDFALTIQTKVFVEQIGIFRSIARHYGMTYLTEMIEWLL
QMNPQLSN
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccgggagcgcgggtggaggcgcgccgagcccggggaggaggtcgagaacagt
cgggatgatggctcttcctctacttcactctctgctctcaagcgattggagcggagtcag
tggacggacaagatggatgcaagatttggttttgaaagactacaggagccagaagagaag
actggctggctaatcaacatgcacccgactgagattttagatgaagataagcgtttggtc
agtgcagtggattactacttcatccaagatgatggcagccgatttaaggtggcactgact
tataagccatatttctacatagcaacaaggaagggttgtgagcgagaagtgtcatctttt
ctctctaagaagtttcaggggaaaattgctaaattggagactgttcccaaagaagatctg
gacttgtcaaatcacttggtgggcttgaagcgaaattatatcaaactttctttcaacact
gtggatgatcttgtaaaagtgaggaaggagatttccccagctgtgaagaagaatcgagag
cgggataacaccagtgatacctatacagctatgttgtctagtgcattgatgggcggtagt
gtaactactgatgaagagggggcctctaagaagatcgctgaccagttggacaatgttgtt
gacatgcgagagtatgatgttccttaccacattcgtttgtccattgacctgaagatccat
gtggctcattggtataatgtccggtaccggggcagttcccttcccattgaaatcacccga
cgagatgaccttgttgaacgacctgatcctgtagttttggcatttgacattgaaacaacc
aaactgcctctcaagttcccagatgcagagactgaccagattatgatgatctcttacatg
gtagatggtcagggatacctgatcaccaacagggagattgtctctgaggacattgaagat
tttgaattcacccctaaaccagaatatgagggacccttttgtgttttcaatgaacctgat
gaggctcatttaattcagaggtggtttgaacatgttcaggaaaccaaacctaccatcatg
gtgacctataatggtgacttttttgattggccatttgtggaagccagggcagcagttcat
ggactgagtatgcatcaggagattggattccaaaaggatagtcaaggggagtacaagtcc
tctcagtgcatccacatggactgtctcagatgggtaaagagggacagttaccttccagtg
ggcagccacaaccttaaagctgcagccaaagccaagctagggtatgaccctgtggagttg
gaccctgaggatatgtgtcgaatggccactgaggagcctcagacactagctacatattca
gtatcggatgctgttgctacttattacatgtatatgaagtatgtccatcccttcatcttt
gctctctgcaccattatccccatggaaccagatgaggtcctgcggaagggctcggggacc
ttgtgcgaggccttgttgatggtccaggctttccatgccaacatagtttttcctaacaag
caagaacaggagttcaacaaactgactgaagatggccacgtattggactcagagacttac
gttgggggccatgtggaggcgctggagtccggtgtcttccgcagtgacattccctgccga
tttaaaatgaatcctgcagcctttgacttcttgctgcagcgtgtggagaagaccatgcgc
catgctattgaagaagaggagaacgtgcccattgaccaggttaccaacttccaagaggtg
tgtgatgaaattaaaaacaaactgacctccctcaaggatgttcccaatcgaattgagtgt
cctctcatataccacctggatgtgggtgctatgtaccccaatattatcctcactaacagg
ctgcagccttctgccatagtgaacgaggccacgtgtgctgcttgtgactttaataaacca
ggtgctaattgtcagcgaaggatgacctggcagtggaggggagagttcatgcctgccagc
cgcagcgagtatcatcgtattcagcagcagctggaatcagagaagtttccgccattgttc
ccagacaaaccagcccgggcatttcatgagctgtcccgagaagagcaggctaaatatgag
aagaagcgactggcagattattgccggaaagcttacaagaagatccacatcaccaaagtg
gaagaacgtctcaccaccatctgccagcgggaaaactccttctacgtagacactgttcga
gctttccgtgaccgacgatatgagttcaaaggactccataaggtatggaagaagaagctg
tctgctgccatggaaatgggagatgctgctgaagtcaagcgatgtaaaaacatggagatt
ttgtatgattccttgcagctggctcacaagtgtatcctcaactctttctatggctatgtg
atgcgcaaaggggctcgatggtattccatggagatggcaggaattgtctgtttcacggga
gccaatatcatcacacaggcccgggagctgatcgagcagattgggagacctctagagctt
gacacggatggaatctggtgtgtcctaccaaacagctttccagaaaattttgtcatcaag
tcaaccaatgcaaagaagcccaaggtgaccatctcctatcctggagctatgttaaatatc
atggtgaaggaaggcttcacaaatgatcagtatcaagagcttactgagcccacttccctc
acttacatcacccgctcagaaaacagcatcttctttgaagtggatggtccataccttgct
atgattcttccagcttccaaggaggaggggaagaaactgaagaaaagatatgctgtgttc
aatgaagatggctccttggctgagctaaagggctttgaggtcaaacggcgtggagaacta
cagctgattaagatcttccagtcgtcagtgtttgaagcattcctaaagggcaacaccttg
gaggaggtctatgggtctgttgccaaagtagcagattattggttagatgttctctacagc
agggcagccaacatgccagactcagaactgtttgaactgatctctgaaaaccgctccatg
tctcggaaactggaagactatggagagcaaaaatccacatccatcagtacagccaagaga
ctggccgagttcttgggagatcagatggtgaaggatgctgggctgagctgtcgcttcatc
atttcccgcaaacctgaagggtctccagtcacagagagggccatcccacttgctattttc
caagcagagcccacagtaagaaaacacttcctccggaaatggctcaagagctcttccctg
caagactttgacattcggacaatcctggactgggattactacatcgaaagacttgggagt
gccatccagaagatcatcaccattcctgcagccctgcagcaggtgaagaacccagtgcca
cgtgtccgacaccctgattggctacataagaagctgatggagaagcatgatatatataag
cagaagaagatcagtgagctttttattcacgagggcaaaagacaggtcactatcaatcag
catccagagggtagccagggacatgggattctggatatggaggacctcggtgtcaccaag
ccgttgcagccagcagtcccgattgccaccaaaaggaagagagtccctatagagagccaa
gaagagtcccaaaatttagagttgacacagtcttggcgagaaattttgggacagccacca
tctcttggtacaaccaaggaagagtggctcgtgtggctctcatttcataagaagaagtgg
gagctacaggcccgtcagcgccaagagcgcaggaagaaacggcgtgtggagaccaaagac
agggtgctgagctcaggcgtcattcgtgacggcccaaccacaggactagggcacttcctg
cggagaacagcccgcagcatcctggacctgccttggcagatcgtgcagatcagtgagact
tcccaacctggcctgttcagactttgggctgtcattggcaatgatctacactgtatcaag
ctgaatatcccccgtgtgttttatgtgaaccagcgtgtgcctaaggaagaagatggatct
tctttccgtaaggtgaacagagttctccctcgttccaacatggtctacaatctgtatgag
tattcagtgccagaggacatgtatcaggaacacatcaatgagatcaatgctgatttgtct
gcaccagacattgaaggcgtctatgagacccaggtgccgttgctgctccgggctctcatc
caattaggctgtgtatgtatggtcagtaggcagctggtacagcacctcacgggccgagaa
gctgagaccttctctctagagtacttggaaatgcgttccttggcacagttcagctacctt
gaaccaggaagcatccggcacatctttctgtatcaccactctcagggcagcaaggcgctt
tttgggctcttcatcccctcccagcgcaaagcttctgtgtttgtcttagatacggtgcgc
agtaaccagatgccaaacctgaattccatgtactcatcggaacaccgcctcctgttggag
aaggtgggacccgacctcctaccccccgacaagcacatttttgaagtgcgagctgagact
gacctgaagaccatctacagagccatccaacgactattgcttggctacaaggaagaacgc
cggggtcccactctcattgctatacagtctaactgggagctaaagaggctgaccactggg
atgccagtctttgaggagttcccattggttccagtctgtgtgactgatgacattagctat
ggggccttggactggcagcgtcatgcagcccggcgcatgatccggcactatctcaacttg
gacacttgcctgtctcaggcatttgagatgagtagatattttcacattcctgttgggaat
ctcccagaagacatctctacctttggttcagatctcttcttttctcgccacctccgacac
cataatcatctgctctggttttctcctacatcccgtcctgacttaggtgggaaagaagct
gatgataatcgccttgtcatggaatttgatgatcaagcttcagtggaaataaacaatcct
gggtgttactccactgtgtgcttggaattggacatccagaacttggcagtaaataccatt
ttgcaatctcaccatgttaatgatatggaaggagcgtccagcatgggcatcagcttcgat
gtcatccagcaagcctctctggaagaaatggtcacagggaaccaggcagccaacatcccg
gccagctatgatgagactgctctctgctctaacacattcaggatcttaaagagcatggtg
gtgggctgggtgaaggagatcactcaataccacaacgtctatgctgacaatcaagtgatg
cacttttaccgctggctccggtccccatcctctctcctgtatgaccccgctttgcaccgg
actctacttagcatgatgaagaagctctttctccagcttgtagctgagttcaaacgtctg
ggctcctcagtcatttatgccaacttcaatcgcatcatcctctgcaccaagaagcgtcgc
attgaggatgccattgcctacatagactacatcactaacagcatccactccaaagaaatc
ttccattccttgacgatctccttctcccggtgctgggaatttcttctctggatggatcct
gctaactatggaggaatcaaaggaaaagttccatcccacgtccactatggggagcaaaac
acccagaaagagcagacagcagagaaagaacaagagagtgaggaagaagaggaggaggag
gaagaagaagcagaggaggagatgatagaagaatctaatgtggaagacttattggataac
aactggaacattgtacagtttcttccccaagcagcctcttgccagagctactttctcatg
attatctcagcatatattgtggccgtgtaccacagcatgaaagaggaattaagacgaagt
gctcctgggtgcacccccgtcaagaggagggggaacagccagttgtcccaggaggctgac
ggggtagctggggctcttcctggaatgatcaccttctcccaggattatgtagccaatgag
ctcacccagaacttcttcaccatcacccagaagatccaaaagaaagtgatgggctcccgc
aactccacagagccctccgagatgttcccagtcctccctggctcccacttgctgctcaac
aaccctgccctggagttcataaaatatgtgtgcaaggtgctctcactggacaccaacatc
accaaccaagtgaacaagctgaaccgcgatctcctgcggctcgtggatgtgggtgagttc
tcagaggaggctcaattccgggacccctgccgctcctacgtgctccctgaagtcatctgc
cggaactgcaacttctgccgcgacctggacctttgcaaagacccctccctttctcaggac
acctcgatcttgcctcagtggctttgccccaattgccagaccgcatatgacactgcccac
atcgagatggctctggtagaagttctgcagaagaagctgatggcctttaccctgcaggac
ctgatctgcctcaagtgtaaaggggtgaaggaggccaacatgcccatctactgcagctgt
gctggagactttgccctgaccatccagaccaaggtctttgtggagcagattggcatcttc
aggagcattgctcggcattatggcatgacctacctgacagagatgattgagtggctgcta
cagatgaacccccagctttccaactag
DBGET
integrated database retrieval system
