Sarcophilus harrisii (Tasmanian devil): 100930572
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Entry
100930572 CDS
T02286
Symbol
SLC8A1
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04020
Calcium signaling pathway
shr04022
cGMP-PKG signaling pathway
shr04260
Cardiac muscle contraction
shr04261
Adrenergic signaling in cardiomyocytes
shr04371
Apelin signaling pathway
shr04740
Olfactory transduction
shr04961
Endocrine and other factor-regulated calcium reabsorption
shr04974
Protein digestion and absorption
shr04978
Mineral absorption
shr05410
Hypertrophic cardiomyopathy
shr05412
Arrhythmogenic right ventricular cardiomyopathy
shr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100930572 (SLC8A1)
04020 Calcium signaling pathway
100930572 (SLC8A1)
04022 cGMP-PKG signaling pathway
100930572 (SLC8A1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
100930572 (SLC8A1)
04261 Adrenergic signaling in cardiomyocytes
100930572 (SLC8A1)
09154 Digestive system
04974 Protein digestion and absorption
100930572 (SLC8A1)
04978 Mineral absorption
100930572 (SLC8A1)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
100930572 (SLC8A1)
09157 Sensory system
04740 Olfactory transduction
100930572 (SLC8A1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100930572 (SLC8A1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100930572 (SLC8A1)
05414 Dilated cardiomyopathy
100930572 (SLC8A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100930572 (SLC8A1)
00536 Glycosaminoglycan binding proteins [BR:
shr00536
]
100930572 (SLC8A1)
Transporters [BR:
shr02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
100930572 (SLC8A1)
Glycosaminoglycan binding proteins [BR:
shr00536
]
Heparan sulfate / Heparin
Others
100930572 (SLC8A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
100930572
NCBI-ProteinID:
XP_031806253
LinkDB
All DBs
Position
2:complement(78814561..79243522)
Genome browser
AA seq
967 aa
AA seq
DB search
MMKLSHSQTLPLGYLLSTVALLLFHLDKISAETEGEGTGNETNECTGSYYCKKGVILPIW
EPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEKEITIKKPNGETCK
TTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFTAGDLGPSTIVGSAAFNMFIIIA
LCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYMILSVISPGVVEVWEGLLTFFFFPI
CVVFAWIADRRLLFYKYVYKRYRAGKQRGMIIEHEGDRPIAKSEIEMDGKVISSHVDNFL
DGALVLEVDERDQDDEEARREMARILKELKQKHPEKEIEQLIELANYQVLSQQQKSRAFY
RIQATRLMTGAGNILKRHAADQARKAVSMHEVNTEGTENEPVSKIYFEQGTYQCLENCGT
VALTIIRSGGDLTNTVSVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDI
FEEDENFLVHLSNVKVSSEGTEDGILDANHIMNYACLSSPHTATVTIFDDDHAGIFTFEE
PVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVK
TISVKIIDDEEYEKNKTFYIEIGEPRLVEMSEKKALLLNELGGFTITGKSRYGQPVFRKV
HAREHPIPSTVINIAEDDKQPLTSKEEEERRIAELGRPILGEHTKLEIIIEESYEFKSTV
DKLIKKTNLALVVGTNTWREQFIEAITVSAGEDDDDDECGEEKLPSCFDYVMHFLTVFWK
VLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTS
VPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAAHGEEFEVSPGT
LAFSVTLFTIFAFINVGVLLYRRRPEIGGELGGPRTAKLLTTSLFVLLWLLYIFFSSLEA
YCHIKGF
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaattaagtcattcacagacccttccactgggatatttattaagcacagtggct
ctcttgcttttccatctggacaaaataagtgctgagactgaaggtgaaggaactggaaat
gagacaaatgaatgtactggctcttattattgtaagaaaggtgtgattttacccatttgg
gaaccccaagatccttcctttggagataaaattgctagagctacagtgtattttgtggct
atggtctacatgttcctgggggtatccatcattgctgaccgattcatgtcctcaatagaa
gtcatcacatcccaagaaaaagaaataaccattaaaaaacccaatggagagacctgcaag
accacagtgaggatttggaatgagactgtttccaacctaacattaatggctttgggctcc
tcagcacctgagatccttctttctgtgattgaagtttgtggccataactttactgctgga
gatcttggtcctagcaccattgttggaagtgctgcattcaatatgttcattatcatagct
ctctgcgtctatgtggttcctgatggagagacaaggaagattaaacatttgcgtgtgttc
ttcgtgactgctgcatggagcatctttgcctatacctggctctatatgattctgtctgtc
atatcgccaggggttgtagaagtctgggaaggtttgcttactttcttcttcttccccatc
tgcgttgtgtttgcttggattgcagacagaaggcttctgttttacaaatatgtctataag
aggtatcgagctggcaagcaaaggggaatgatcattgaacatgaaggagacaggcccatt
gccaaaagtgaaattgaaatggatgggaaagtgatcagttctcatgtcgataacttcttg
gatggtgctcttgttctggaagttgatgagagagaccaagatgatgaggaagctaggaga
gaaatggccaggatcctgaaggagttgaaacagaaacacccagaaaaggaaattgagcag
ttaatagaattagccaactaccaagtcctaagtcaacagcaaaagagtcgggcgttctat
cgtatccaggctacccgtctaatgacaggggctggaaatattttaaagagacatgctgca
gaccaagccagaaaagctgtcagcatgcatgaagtcaataccgaagggacagaaaatgaa
ccagtcagcaagatctactttgagcaggggacttatcagtgtcttgagaactgcggcacg
gtggctctcaccattatacgtagtggtggcgatttgaccaatactgtttctgttgacttc
cgaacagaagatggcacagctaatgcaggctctgattatgaatttactgaaggtactgtg
gtcttcaaacctggagagactcaaaaggaaatccgcgtgggtatcattgatgatgatatt
tttgaagaagatgagaacttcctcgtgcacctcagtaatgtcaaagtgtcatcagaggga
accgaagatggaatcctggatgccaatcacataatgaattacgcttgcctgagttctccc
catactgccactgtcaccatttttgatgatgatcacgcaggcatctttacttttgaggaa
cctgtgacacatgtgagtgaaagtatcggcatcatggaggtcaaagtgttaagaacatct
ggagcacgaggaaatgttattgttccctacaaaacgatcgaaggcactgctcgtggtgga
ggagaggactttgaggatacctgtggagagctggaattccaaaatgatgaaattgtcaaa
acaatatcagtcaaaataattgatgatgaggaatatgagaaaaacaagaccttctacatt
gagattggagagccccgactggtggagatgagtgagaagaaagccctgttattgaatgag
cttggtggcttcactataacagggaaatcccgctatggacaacctgtcttcaggaaagtt
catgctagagagcatccaattccctccactgtaatcaacattgcagaggatgataagcaa
cccctgaccagcaaagaggaagaggaacgacgcattgcagaactggggcgcccaatcctt
ggagaacataccaaactggaaatcatcattgaagagtcatatgagttcaagagtactgtg
gacaaacttattaagaagacaaatctagctcttgtggttgggactaacacctggagagaa
cagttcattgaagctatcactgtcagtgctggggaagatgatgatgatgatgaatgtgga
gaagagaagctgccctcttgctttgattacgtgatgcacttcctcactgttttctggaag
gttctctttgcctttgtcccacccacagagtactggaatggttgggcatgttttattgtg
tccatcctcatgatcggccttctgacagctttcattggtgacctggcatctcactttggt
tgtaccattggcctgaaggattcagtgacagcagtggtgtttgttgccttaggaacttca
gtgccagacacatttgcaagcaaagtggcagccacacaggaccaatatgcagatgcctcc
attgggaatgtcaccggcagcaacgcagtgaatgtgtttctgggaattggcgtggcctgg
tccattgctgccatctatcatgcagcacatggagaagaatttgaggtctcccctggcaca
ctagcattttcggtcaccctcttcactatttttgctttcatcaatgttggggtactgctg
tatcgacgaagaccggaaattggaggtgagctgggtgggccccggactgccaagctcctc
acaacttcactttttgtcctcctgtggctgttgtacattttcttctcttccctggaggcc
tactgccacataaaaggcttctaa
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