KEGG   Sarcophilus harrisii (Tasmanian devil): 100930616
Entry
100930616         CDS       T02286                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04115  p53 signaling pathway
shr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100930616 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    100930616 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shr04121]
    100930616 (COP1)
Enzymes [BR:shr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100930616 (COP1)
Ubiquitin system [BR:shr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100930616 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100930616 (COP1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_CAF1B_HIR1 zf-RING_UBOX Beta-prop_EML Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 WD40_RFWD3 RING_XB3-XBAT31 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING zf-Nse
Other DBs
NCBI-GeneID: 100930616
NCBI-ProteinID: XP_031792789
LinkDB
Position
4:complement(63728693..63947001)
AA seq 748 aa
MMSGSRQAGPGAAGTGPGSSAASSVTSASSSSSSSSPPTLTAVVAAAGSSGSAGSGGLGA
TVRPLMVAAAVSGSGGGGGGGGGALAAGLSRLGGSTRPGSAVNSGGGSSGSGSRKRPLLT
PLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV
DNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLPN
VNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVE
EMSGLYSPVSEDSKVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQSSIVLRGIWFHSYLT
KKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRVSDESRTASQLDEFQECLSKFTRYN
SVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYP
ENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNL
MDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYY
DLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEK
NFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV
CWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgatgtccggcagccgccaggctggtcccggcgctgccgggacagggcccggctcctcc
gcggcctcctcggtcacttccgcctcctcgtcgtcgtcgtcgtcgtcgcccccgacccta
acggcggtggtggccgcggcgggctccagcgggtccgccggctcggggggcctcggggcc
actgtgcggcctctcatggtggccgccgccgtgtcgggctcgggaggcggaggaggcggg
ggcggcggggctctggccgcgggcctctcccggcttgggggctcgaccaggcccgggagt
gccgtcaacagcggcgggggcagctcgggcagcggcagcaggaagcggcctctgctcacc
cctctctgcaatgggctcatcaactcgtacgaggacaaaagcaacgattttgtctgcccc
atctgttttgatatgattgaagaagcatacatgacgaagtgtggccacagtttctgctat
aaatgtatccatcagagcctggaagacaataataggtgtcccaagtgtaattatgttgtg
gacaatattgaccatctttaccctaatttcttagtgaatgaactcattctcaaacagaag
caaagatttgaggaaaagaggttcaagttggaccattcagtgagtagcaccaatggccac
aggtggcaaatatttcaagatttattgggaactgatcaagataaccttgatttaccgaat
gtcaacctgatgctggaactacttgtacaaaagaaaaaacagctggaggcagagtcacat
gctgcccagctacagatccttatggaattcctcaaggttgcaaggagaaataaaagagag
caactggaacagatccaaaaggagctaagtgttctggaggaagatattaaacgagtggag
gaaatgagtggtttatactctcctgtcagtgaggatagtaaagtacctcagtttgaagct
ccctctccatcacacagtagtattattgattctacagaatatagtcaacctccaggtttc
agtggcagctctcagagttcaattgtattgagaggaatctggttccatagctacttgaca
aagaagcagccttggtataacagcacattagcgtcacgacgaaaacgcctcactgctcat
tttgaggatttagagcaatgctacttttctacaaggatgtctcgggtctcagatgaaagt
agaactgcaagccaattggatgagtttcaagagtgcctttctaagttcactcgatacaat
tcagttcgacccttggctactttgtcttatgctagtgatctctataatggttcaagcata
gtctccagtattgaatttgaccgagattgtgactattttgccattgctggagtaacaaag
aagatcaaagtatatgaatatgggacagtcatacaagatgcagtggatattcattatcct
gaaaatgagatgacctgcaattccaaaatcagctgtatcagctggagtagttaccataag
aatctattagccagcagtgattatgaaggcacagtcatcctatgggatggattcacagga
cagaggtcaaaggtctaccaggaacacgagaagagatgttggagtgttgattttaatttg
atggacccaaaacttttggcttcaggttctgatgatgcaaaagtaaaactgtggtctacc
aacctggacaattcagtggcgagtattgaagccaaggcaaatgtgtgctgtgtcaaattc
agcccttcgtctagataccatttggcttttggctgtgcggatcactgtgtccattattat
gatcttcgcaacactaaacagcccatcatggtgttcaaaggacatcgaaaggcagtttcc
tatgcaaagtttgtgagtggggaagaaattgtttctgcgtcaactgatagtcaactgaag
ttgtggaatgtagggaaaccacactgtttgcgttccttcaagggccatatcaatgaaaag
aattttgttggattggcttccaatggagattacatagcctgtggaagtgaaaataattcc
ctctacttatactacaagggcctttcaaagacgttgctgacttttaaatttgatacagtc
aaaagtgtcttagacaaggaccgaaaagaagatgacacaaatgaatttgttagtgctgtt
tgttggagggcactaccagatggggagtccaatgtgctgattgctgctaacagtcagggg
acaattaaggtgctcgagttggtatga

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