Sarcophilus harrisii (Tasmanian devil): 100930627
Help
Entry
100930627 CDS
T02286
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100930627 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100930627 (SCARF1)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100930627 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
100930627
NCBI-ProteinID:
XP_031823644
LinkDB
All DBs
Position
4:complement(438712334..438723021)
Genome browser
AA seq
827 aa
AA seq
DB search
MGPWPLLLLWVRGVLGELELDPLGRHVCQDGRFVGRSTGVGGCWEGGCWQEESEACVGPA
SVWGPSCGEEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGPDCRENCPCHPHGQCDAATG
HCTCNSDRWGTNCQFPCPCGPHGHCNPLTGACRCEPGWWTATCRKACQCSSSSLGCDQGT
GACRCEPGWWGRRCSFRCSCHHSPCEQGTGRCVCRTGWWGSECQQRCTCRHGHCDPASGH
CACHPGYQGAFCEQPCPVGRYGVQCQSSCGHCRHNQPCSPDTGACLACEPGWNGTQCDQP
CPPGTHGEKCGQLCPQCRQGEACQPESGHCQHCDPGLTGPRCEEPCAPGTFGEACGSLCP
PCVEGTCDAVTGDCICRLGYWGPSCNASCPLGFYGVNCSSPCPCPEGPCHPASGACELGL
QGQGALLAGLLVPLLLLLLAVVACVSCCCWAAQPDPKDRPARDGAAVSRVKLQVRGALSS
LGSALPCGSLSNHKLPRVTVSHHDAEIPFNHSFIEPPSAGWASDDSFSSDPDSGEEDEGP
AYCVPPPQDEELREAREAGKGLSAPDEPSTPFAIPRTSSLARAKRPSVSFAEGTKFGPQN
SQDSGELASPSRKPKRLSRPAQAQAEGQEAEGPPGAPEPEDPQSGSQEPPSTAAAQGDAS
ADHRRLPLGGRTVAQRVEAIESGNRGSAGPVTTIYMLAGTPKGAEGPVRAVLRRFGSFQK
GRAEAKTKGGIPKPPRRALSRDKGTLVPSPTPSPDSPRCLELCETPAPGEGSQETTEELG
DDGAKSPGGTTQAATGDALSELEEAEKEVEEEPQYENVKPGSGTSNS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggggccgtggccgctgctactgctctgggttcggggggtcttgggggagctggagctg
gatcctctggggaggcacgtctgccaagacggaaggtttgtggggaggagcacgggggtc
gggggctgctgggagggagggtgctggcaggaggagagtgaggcttgtgttgggcctgct
tccgtctggggcccatcgtgcggggaagaggaagtgtgtgtgaaacctggactctgccga
tgcaaacctggcttcttcggggcccagtgcagctcccgctgcccgggccagtactggggc
cccgactgccgggagaactgcccctgccacccccacgggcagtgcgatgccgccaccggc
cactgcacctgcaacagtgaccgctggggcaccaactgccagttcccgtgtccgtgcggc
ccccacgggcactgcaacccgctgaccggggcctgccgctgcgagcccggctggtggacg
gccacgtgccgcaaggcctgccagtgcagctcctcctctctgggctgcgaccagggcacc
ggggcctgccgctgcgaaccaggctggtggggccggcgctgcagcttccgctgctcctgc
catcactccccctgcgagcagggcacgggccgctgcgtctgccgcaccggctggtggggc
tccgagtgccagcagcgctgcacctgccggcacggccactgcgaccccgccagcgggcac
tgcgcctgccaccccggctaccagggcgccttctgcgagcagccctgccccgtgggccgc
tacggggtccagtgccagagcagctgtggccactgcagacacaaccagccctgctctcct
gatacgggggcctgtctggcctgcgagcccggctggaatggaacccagtgcgatcagccg
tgcccaccgggcacccacggggagaagtgtgggcagctctgcccccagtgtcggcaaggc
gaggcttgccagccagagagtgggcactgccaacactgtgacccaggcctgacagggccc
aggtgtgaagagccctgcgctcccggcacctttggggaggcctgtgggtcactgtgccca
ccctgtgtcgagggcacctgcgatgctgtgactggagattgtatctgcagattgggctac
tgggggcccagctgcaatgcctcctgccccctcggcttctacggagtcaactgttcttcc
ccctgcccgtgcccagaggggccctgccaccctgcctctggggcctgtgaactcgggctc
cagggccagggtgccctcctggccggcctcctggtcccgctgctgctgctgctgctggct
gtcgtggcctgcgtctcctgctgctgctgggcggctcagcccgaccccaaggacaggccg
gccagggacggggctgctgtgtctcgagtcaagctgcaggtcaggggggctctgagcagc
ctgggctcagcgctgccctgtggctctctcagcaatcacaaactgccccgggtcacagtg
tcccaccacgatgccgagatccccttcaatcacagcttcattgagcccccgtctgctggc
tgggcctctgatgactccttctcctccgaccccgactctggggaagaggatgaggggcca
gcttactgcgtaccccccccacaagatgaggaactgcgagaggcccgtgaggccggaaaa
ggtctctctgcaccagatgagccttccacgccttttgccatccctcgaacttccagcctg
gcccgagccaagcggccatccgtctcctttgctgaaggaaccaagttcgggccccagaac
tcccaggactctggggagctggccagcccctcgaggaagcccaagcggctatcccggcca
gcccaggcccaagctgaggggcaggaggctgaggggcctccgggtgctccggaaccagag
gaccctcagtctggttcccaagagcctcccagcactgctgctgctcagggggatgcgtct
gctgaccaccggaggcttcctctcgggggcaggactgtggcccagagggtagaggccatc
gagagcggtaacagggggagcgcaggccccgtgaccaccatctacatgttagcagggact
cccaagggagccgaggggcccgtgcgggcggtcctgcgacgctttggcagtttccagaag
ggccgggcggaggccaagaccaagggtggcattcccaagcctcctcgccgggccctgagc
cgggataagggcaccctggtcccctctcccactcccagccctgactcacctcggtgcctg
gagctgtgtgagacgcccgcacccggtgaaggcagccaggagaccaccgaagagttgggg
gatgatggcgccaagagcccggggggcaccacgcaagcagccacaggggatgcgctttct
gagctggaggaggctgaaaaggaggttgaggaggagccccagtatgagaatgtcaaacct
ggctctggcacctcgaattcctga
DBGET
integrated database retrieval system
