Sarcophilus harrisii (Tasmanian devil): 100930723
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Entry
100930723 CDS
T02286
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100930723 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100930723 (SCN8A)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100930723 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
IQ
GPHH
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
100930723
NCBI-ProteinID:
XP_031793712
Ensembl:
ENSSHAG00000009545
LinkDB
All DBs
Position
5:complement(90930271..91133700)
Genome browser
AA seq
1989 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKRIAEDKIKKPPKQDGSHRDDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
LRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESFLENGTKGF
DWEEYINNKTNFYTIPGMLDPLLCGNSSDAGQCPEGYLCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGGGRGSRSSSEISK
LSSKSAKERRNRRKKRKQKELSEGEEKGDSEKVFKSESEDGMRRKAFRLPDNRIGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSFKTPGRFRDPGSENEFADDEHSTVEESEGRRDSLF
IPIRAHERRSSYSGYSGYSQGSRSSRIFPSLRRSIKRNSTVDCNGVVSLIGGPGPMAPGR
LLPEVKIDKAATDNSATTDVEIKKKGPGSLLVSMNQLNASYGRKDRVNSVMSVVTNTLVE
ELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNMIVMDPFVDLAITICIVLNTLFM
AMEHHPMTPHFENVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLM
ELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFA
VVGMQLFGKSYKECVCKINQDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQ
AMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAW
IKLKVHAFVQTHFKREADEVKPLDELYDKKANCIANHTGADIHRNGDYQKNGNGTTSGIG
SSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSS
SEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEDGLGKSWWILRKTC
FLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKW
TAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEYRFEIEEVN
NKSDCEALMDGNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPEEQ
PKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPLNNIQGVVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQME
NILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFV
SPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMS
NFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSG
FKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEI
WEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAF
TKRVLGDSGELDVLRQQMEERFVASNPSKMSYEPITTTLRRKQEDVSAVVLQRAYRGHLA
RRGFISRKLTSNKLENGVTHREKKEGTPSTASLPSYDSVTKPEKEKQERAEEGRRERAKR
QKEVRESKC
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcggctgcttgcaccaccaggccctgatagtttcaagcctttcacccctgag
tccctggctaacatcgagaagcgaattgcggaggacaaaatcaagaagccaccaaagcag
gatggcagccaccgggatgatgacgaggacagcaagcccaagccaaacagtgacttggaa
gcaggaaagagtctgcctttcatctacggggacatcccgcaaggccttgttgctgtgccg
ctggaggactttgacccgtactatttgacacagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaacctg
ttgagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctccagactggtcgaagaat
gtggagtacacgttcacggggatttatacttttgaatcacttgtgaaaattatcgccaga
ggtttctgcatagacggctttacatttttacgagacccatggaactggttagatttcagc
gtcattatgatggcatatgtgacagaatttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggtctgaagaccatc
gtaggagccctcattcagtcagtcaagaagctgtctgatgtgatgatcttaaccgtattc
tgcctaagtgtctttgccttgattggactacaattgttcatgggcaacctgcggaacaag
tgtgttgtgtggcccattaatttcaatgagagtttccttgaaaatggcaccaaaggtttt
gactgggaagagtatatcaacaacaaaacaaatttttataccataccgggcatgttagat
cctttactttgtgggaacagttctgatgctgggcaatgtcctgaaggatacctatgtatg
aaagcaggaaggaatccaaattatggctatacaagctttgataccttcagctgggccttt
ttggcattgtttcgccttatgacccaggactattgggaaaacttgtatcaattgacttta
cgagcagcaggaaaaacgtacatgatcttctttgtcctggttatctttgtgggttccttt
tatttggtcaatcttatcttggctgtggtagccatggcctatgaggagcagaaccaggcg
actttggaggaggcagaacaaaaggaggcagagttcaaggcaatgttggaacaattaaaa
aagcaacaggaagaagcccaggctgctgcaatggccacttctgctggaactgtgtcagaa
gatgctatagaagaagaaggtggagggagggggtctcgcagctcttctgaaatttctaaa
cttagttcaaagagtgccaaagagagacgtaacaggaggaagaagaggaaacagaaggag
ctctctgaaggagaagagaaaggggacagtgagaaggtgtttaaatcagagtcggaagat
ggtatgaggaggaaggcctttcgcctaccagacaacaggataggcaggaaattttctatc
atgaaccagtcgctgctcagcattccgggttccccattcctttctcgccacaacagcaag
agcagcatcttcagctttaagacgccgggcaggttccgagaccctggttcagagaatgag
tttgctgatgatgagcacagcacagtggaggaaagcgaaggccgccgagactcgctcttc
atccccatccgggcccacgagcggcgcagcagctacagtggctacagcggctacagccag
ggcagccgctcctcccgcatctttcccagtctgcgccgcagcatcaaacgtaacagcacg
gtggactgcaacggagtggtgtccctcatcggggggcctgggcccatggccccagggcga
cttctgcctgaggtgaaaatagataaggcagctaccgataacagtgcaacaactgatgtg
gaaattaagaagaaaggccctggatctctcttagtttctatgaaccagctaaatgcttca
tatggacgcaaggacagagtcaacagtgtcatgagtgttgttacaaatacgctggtagaa
gagttagaagagtctcagagaaagtgccctccatgttggtacaaatttgccaacactttc
ctcatctgggaatgccatccatactggatcaaactaaaggagattgtgaacatgattgtt
atggacccttttgtggacttagccattaccatctgtattgtcctgaacaccttgtttatg
gcgatggagcatcatcccatgacaccacactttgaaaacgtcttggctgtaggaaatctg
gttttcactggaattttcacagcagaaatgtttctgaagcttatagccatggacccctat
tattatttccaagaaggttggaacatttttgatggatttattgtctccctcagtttaatg
gaactcggtctagcagatgtggaaggactttcagtgctgagatctttccgtttgctccga
gtcttcaaattggccaaatcctggcccactttgaatatgttgatcaagatcattgggaac
tcagtgggtgctctaggcaacctgacgctggtgctggccatcattgtcttcatctttgct
gtggtggggatgcagctgtttgggaaaagttacaaggagtgtgtctgcaagatcaaccaa
gactgtgtgctccctcgctggcacatgcatgactttttccattctttcctcatcgtcttc
cgtgtgttgtgtggggagtggatcgaaaccatgtgggattgcatggaagtggcgggccag
gccatgtgcctcattgtcttcatgatggttatggtcattggcaacttggtggtgctgaat
ctgtttctagccttgcttctaagctccttcagtgctgacaatctggctgccacggatgat
gatggagaaatgaacaacctacagatctctgtcatccgaattaagaagggggtagcctgg
attaagttgaaagtgcatgcctttgttcagactcacttcaaacgtgaggctgatgaggtg
aagcccctggatgagctatatgacaaaaaggccaattgcattgccaaccacactggggct
gacattcaccgaaatggggactaccagaagaatgggaatggtaccacgagtggcattggt
agcagcgtggagaagtatatcattgatgaggaccacatgtccttcatcaacaaccccaac
ctgactgtgcgggttcctattgctgtgggcgagtctgactttgaaaatctcaatactgag
gatgtcagcagcgagtcagatcccgagggcagcaaagataaactggatgataccagttca
tctgaggggagtactattgatatcaaaccagaagtggaggaagtacctgtggagcaacct
gaggaatacttggatccagatgcctgcttcacagaaggttgtgtccagcggttcaagtgc
tgccaggtcaacattgaagatggacttggtaagtcctggtggatcctacggaaaacctgt
ttccttattgtggaacacaactggtttgagaccttcatcatcttcatgattctgctgagc
agtggtgctctggcctttgaggacatctatattgaacagaggaaaaccattcgcaccatt
ctggaatatgcagacaaggtcttcacctacattttcatactggagatgttactcaagtgg
acagcatatggctttgtcaagttcttcaccaatgcctggtgctggctggactttctcatt
gtggctgtctctttagtcagccttatagctaatgccctgggctactcggaactaggtgcc
ataaagtcccttaggaccctaagagctttgagacccttaagagccttatcacgttttgaa
gggatgagggtggttgtgaatgccttggtcggagccatcccctccatcatgaatgttctg
ttggtgtgcttgatcttctggctgatttttagcatcatgggggtgaacctgtttgcaggg
aagtaccactactgcttcaatgaaacatcagaataccgctttgagatagaggaagtcaac
aataaatcagactgtgaagcacttatggatgggaattccactgagatccggtggaagaat
gtgaagatcaactttgacaatgtaggggcaggatatctggctcttctccaggtggcaacc
tttaaaggctggatggacatcatgtatgcagctgtggattcccgaaagcccgaagaacaa
cccaaatatgaagataacatctacatgtacatctactttgtcatctttatcatctttggc
tccttcttcaccctgaacctgttcattggtgtcatcattgacaacttcaatcaacaaaag
aaaaagtttggaggtcaggacatctttatgactgaagaacagaaaaaatactacaatgcc
atgaagaagctgggctcaaagaaaccccaaaaacccatccccaggcccctcaacaatatt
cagggtgtcgtctttgattttgtaactcagcaagcttttgacatcgtgattatgatgctc
atttgcctcaacatggtgacgatgatggtggaaacagacactcaaagcaagcagatggag
aacatcctgtattggatcaacctggtctttgtcattttcttcacatgcgagtgtgtgctc
aagatgtttgctttgcggcactactactttaccattggctggaacatctttgactttgtg
gtggtcatcctctccatcgttggaatgttcctagctgatataatagagaaatattttgtg
tccccaactctattccgagtcattcgattggcccgaattggacgcatcttgcgtcttatc
aaaggagccaaagggatccgtacccttctctttgccttaatgatgtccttgccagccctt
ttcaatattggccttttgctgttcttggtcatgttcatcttctccatctttgggatgtct
aactttgcctatgtcaaacacgaagctggcattgatgacatgttcaactttgagacgttt
ggtaatagcatgatctgcctgttccaaatcaccacctcagccggctgggatggtctcctg
ctgcccatactgaaccgcccgcctgactgtagcctggacaaggagcacccaggtagcggc
tttaagggagactgtgggaacccttccgtgggcatcttcttctttgtcagctacatcatc
atctccttcctaattgtggtgaatatgtatattgccattatcttggagaacttcagtgtg
gccacagaggagagcgcagatcctctgagcgaggatgactttgagaccttctatgagatt
tgggagaaatttgaccctgatgccacccaattcattgagtattgtaaactggcagacttt
gctgatgctttagagcacccgctccgtgttccaaagcccaacaccattgagctcattgcc
atggatctgccaatggtaagtggcgatcgcatccactgcctggacatcctttttgccttt
accaagagggtccttggggacagtggagagctggatgtccttcggcagcagatggaagag
agattcgtagcatccaatccttccaaaatgtcttatgagcccatcaccaccacactgcga
cgcaagcaggaagatgtgtctgcagtggtccttcagcgcgcctatcggggacatttagcc
agacgaggcttcatcagccgaaagctaacctccaataagctggagaacggggtcacgcac
cgggagaagaaagaggggaccccttctacagcctctctcccatcctatgacagtgtaact
aagcctgaaaaggagaaacaagaacgcgcagaggaaggaagaagggaaagagctaaaaga
caaaaagaggtcagggaatccaagtgttag
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