Sarcophilus harrisii (Tasmanian devil): 100930928
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Entry
100930928 CDS
T02286
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100930928
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100930928
Membrane trafficking [BR:
shr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100930928
Ion channels [BR:
shr04040
]
Other channels
Mechanosensitive channel (Piezo)
100930928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
100930928
NCBI-ProteinID:
XP_031805130
LinkDB
All DBs
Position
2:complement(235695937..235797215)
Genome browser
AA seq
2479 aa
AA seq
DB search
MASDVTSALTFRVLLPFSLIAGCTKNLLRAICYTSALFLLIQLTAQIIFRFMPPDGAVWE
VILGDLGILRFSQVDAKNIVRLLGPDIGMLVTSLVVMKLSQKLVMPLVPESPLSSHSKVV
EEETGEETEAGDGIDQDIDDSSSDSSTSSEASVSGARTKGKMTEFLGKIIAIITHLKTIL
DTIITVAGKILVTLLLGLSGIVYPSLTSAVYFVTFLGLCSWWSCHHEVGPLAFSTMCVSL
AIFTSGHIGSFYLYQLPYFQDLVSPEDIYARLLGMTALIKTNRTESWRLYIHQELSWPEF
ANPLILLLFYYVLIMLLHQWNPNPRISECKQEWIEVTPDSSADYDEVEMNCILWPIVNED
RLTVPPSGSWQDVPLLKCEEYKFPSSGVDSPAFCDSEHGSSAFLEETEPKDKEPSSFFVL
RHLIMSQSYVTALIIMMVWSITHNSWLTFVLLIWSCIIWMSRNRQRLALLSSPFLVIYAN
ILILLNFFVALKVSQEELFPGVPTSVLIDFDLKPYSQPCFDIGVKTFYAFSFWLLLRQYV
TERQSLAKAKEEVLQEVTGDECGQDKLTNALMDLLGSFIIGILTKYWIFLCGSMFFIVSF
DGKVVVYKILYIMFFFACMALYQIHYDCXRRNLKYFWKAVVSYSMVVLITVYGYQFKTIS
GFLIHTLGLSEEGLRDIGLERFDTVELFARIMLPAAFLLACILQLHYFNEDFLKITSLNN
TAISLEGTPDREKEVHYLRIPELTLSDHEKETRDCDWMIDKLTTGFLKVLEIVNGTXVLL
WRFLEIHIIKIVSTMIIWITLQEVSFMNCIFYIIWVFALPYSKLRPYASHICTVWACVMV
ICKMMYQLKFVKPLTYSSNCTKLYQNGTLLPDNLEELREVSLLYISPIDPAYWLGGLRKC
DTKLPITLTLQNHLTILALMAIEATVYRHQKFYRHCNQLKQPLLSTIFNGVTRKHLDDGL
LSMIKYFINYGFYKFGLEMCFVAVLNVTGQRMDFYSLVHICLLIYLIRLRRRKAIAEAWP
RYCGFLASLMTFQYFLCIGIPPAFCKDYPWRSMRPAIHSNLIKWLYLPDFAEKPDAGFLL
HDFLLLLFASLQWQVFEDENKASVRMQVGDNVEISRDLVPEDLSQFTTVPNFIYSRSYLD
MAKVIVFSYHLWFVLCLVFLTGTSQINILCAGYLVAFFYFMLHGRALLLRPVKIILHKWD
YLITYAVLVIAMKNLLSIGACAYLERLLSSHCWFVHSFSIYCTIRGYSLSFPDDEKCEPP
EQDAGILWDAICFTFLLIQRRIFTSYYHLYVMADLKVTEILASRGAEMFDLKFKKLLVLR
EKEEETSKLFMMKQMEKIKLKQKKIDSRQQTDKTPDASVVKDSYSPQPGARQTQEILMQR
IINIIKFSWVFGKVLLEDTTAAVHSLYKESWEIATVLRMERCMLLRRLSKGEKATKENIL
RYYHLKLQEEQKTTLVKIKERKTGAEDQGLPEAGLSEHYRDNAQLPNESEEAVIPPGDHC
RDKDTSSQQSPREEFQLQAGEGKDFAKNDLEDLPSSMGHPPTGEDLQSFEETIVLRGPRE
LSEMGDDHASDDEGNLSEKDEYEQSVSELVCQGASLSYSSSMRSQQRSSLSEGKELVTVS
LGQKKKRVTRPMRKTPFPFLTAGDLLLKRVFYDSELEEADKFYKNLPRMVKLTLELYKLI
ESKSEMLCYFMIILNHMVSASILTLVLPILCFLWAMLSVPRPPKCFWMAAIFYTEATVVV
KYFSQFGFFPWTTKLYAGIHGEKPFSLPNVVGIEKKSGYVHYDLVQLLALFYHRSVLKSL
GLWDEPSSDQANCKEKKKMKKSKNQGHSSRKQGGFPQGWQAEPHPQPIPSLRVFWRKKQT
PLGTGESKDRKIKKIKSWFRQFPINAKMLKKKLVKARKLVTETALHIYWTIKQFFYNIIH
PEFSPVCDVYAFKFLVESINFLIIICRYWAFGKYSAADLSETLSEDQVPEAFLAMILIQY
GSMIVDRAIYLRKNMFGKCMFQVVLVIGVHFWLFFILPGVTKRRFSLNYVAQIWYLVKCI
YFGLSAYQIKCGYPNRILGNFLTKNFNFLNLFLFKGFRFLPFLLELRAVMDWIWTDTALS
LSSXICLEDLYAGVFIMKCWRESEKKYPHSLGQQKKKIVKYGQGGVITFALIFLMWFPLV
FMSLLKSVGGITNQPLDVSIKISISGYETLFTMSSQQQNLIPFSQKAFDNLTAQYAFHPA
AMQFISNYHPEDIIVAKIKSHASLLWNISPANRAAMITELSTATAIYVTLMWTIQRALPP
QMHSSHPNFHDLNTIVSENLDCHVTPLPFGKERPQDIDKLAFYRNITIQLQQVAANASSS
GSGTTEWWVIQEWKPSCAKNQGCSQDLEIIIYNDKVSPQSLGFLAGYGIVGLYVSVVMVI
AKFIREHFNGISRSIMYEELPNVDRILKLCTDIFLVREMGDFELEEQLFSKLIFLYRSPE
TMIKWTREAQSPSQQPVDQ
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgatgtcacttctgcgctcacttttagagttcttctgccattctctctgatt
gcaggctgcacaaagaatctgttgagagcaatctgttacaccagtgcccttttcctactg
atacaattgactgctcagataatttttcgtttcatgcctcctgacggtgcagtttgggaa
gtgatacttggagatttggggattctaagattcagccaagtggatgctaagaatattgtg
cgtctattgggtccagacattgggatgctggtcacatctcttgtagtaatgaagttgagc
caaaagctggtgatgccccttgttcctgagtcacctttatcctcccatagcaaagtggtg
gaggaggagacaggggaagagacggaggcaggagatggaattgatcaggatattgatgac
agtagttccgacagtagcacatcctctgaagcaagtgtttctggagcaagaaccaagggg
aagatgacagaattcttgggcaaaatcattgccatcatcacccacttgaaaacaatactg
gataccattattacagtagctgggaagatcctggtgaccctcctcctgggtttgtcagga
attgtctatccttcacttacatctgctgtatactttgtcaccttcctgggcttatgctcg
tggtggtcctgccatcatgaagtcggccccctggccttcagcaccatgtgtgtctcccta
gccatcttcacttcaggccacatcgggagtttctatctctatcagctgccttattttcaa
gacttagtttcacctgaagacatttatgccaggctattgggcatgactgctctcattaag
accaatagaacagaatcctggagactctacatccatcaggaactcagctggcctgagttt
gcaaatcctctcattttgcttttattctactatgtgcttatcatgctattacatcaatgg
aatccaaatccaaggataagtgaatgtaaacaagaatggatagaagttactccagactct
tcagcagactatgatgaagtagagatgaactgtatcttgtggcccattgtcaatgaggac
aggttgactgttcccccgagtggaagctggcaggatgtgccactcttaaagtgtgaagaa
tacaagttcccaagttctggtgtggattcacctgctttttgtgattcagaacatggaagc
agtgcctttcttgaggagacagaacctaaggacaaagagcccagcagtttctttgttctt
cgtcatctcattatgagtcaaagttatgtaacagcattgatcattatgatggtctggagc
atcactcataacagttggctgacttttgtcctgttgatctggtcatgcatcatttggatg
agtcgtaacaggcaacgcttggccctgctcagctcaccttttcttgtcatctatgcaaac
atccttattcttctcaacttctttgtggctctcaaagtttcccaggaagaattatttcca
ggagttccaacttcagtcctcattgactttgatctaaagccttattctcagccctgcttc
gatattggtgtcaagactttctatgcattttcattctggcttctcctgaggcaatatgtg
acagagagacagtccttggcaaaggcaaaggaggaggttctacaggaagtgactggtgat
gaatgtggtcaagacaaactaacaaatgctctgatggatctcttgggctctttcattatt
ggaattctgaccaaatactggatctttctttgtggtagcatgttttttattgtcagcttt
gatggcaaagtggttgtctacaaaatcctctacatcatgtttttttttgcctgtatggcc
ctttatcaaattcactatgactgttagagacgaaacttgaagtatttctggaaggctgtg
gtctcttactccatggtagttcttattactgtttatggctaccagtttaaaaccatttct
ggctttttaatccacacactggggctgtcagaagaggggttaagagatataggactagag
cggtttgatacagtagagctgtttgcaaggattatgcttcctgcggcttttcttctggcg
tgcatccttcagttgcattattttaatgaagactttctcaagatcaccagcttgaataat
actgcaatcagtttggaaggcacacctgacagagaaaaggaagttcattacctaagaatc
ccagagctcactttgagtgaccatgagaaagaaacaagagattgtgactggatgattgac
aagttaactactggttttctgaaagttctagaaatagttaatggaacttaagtgttacta
tggagattcctggaaatacacattattaagattgtttccactatgatcatctggattact
cttcaggaggtttccttcatgaattgtattttctacatcatctgggtgtttgcattgccg
tattccaaattgcgcccgtatgcatcacatatctgcacagtttgggcttgtgtgatggtc
atttgcaaaatgatgtatcaactgaagtttgtcaaacctctgacctactcatcaaattgc
actaagttgtatcagaatgggactcttctacctgacaacctagaagagctgcgagaggtt
tctctcttatatatctcccctattgatccagcatattggcttgggggactaagaaaatgc
gataccaaactccccatcactctgactttacagaatcatctcaccatcttggcattaatg
gcaattgaagccactgtgtacaggcaccagaaattctaccgacactgtaatcagctgaaa
cagcccctattgagcaccatttttaatggtgtcacgagaaagcacttggatgatgggtta
ctgagtatgatcaaatatttcatcaactatggtttctataagtttgggctagagatgtgc
tttgttgctgttctcaatgtcacaggacaacgcatggatttttattccctggtccacatc
tgcttgttaatttatttgatacgtcttcggaggaggaaagcaattgctgaggcttggcca
agatactgtgggtttcttgccagtcttatgacctttcagtactttctctgcattggaatc
cctccagctttttgcaaagattacccatggagatccatgagaccagcaattcactcaaat
ctcattaaatggttgtatctccccgattttgccgagaaaccagatgctggttttttgctg
catgattttttgcttctgctttttgcctctctccagtggcaagtatttgaagatgagaat
aaggcttctgtgagaatgcaggtaggagataatgtggagataagccgggatttagtccct
gaagacctaagtcaattcactacagtaccaaactttatttactcccgatcctacctggat
atggctaaagtcattgtgttcagctaccacctctggtttgtactctgcctggttttcctc
acaggaacttctcaaatcaacatcctctgtgctggctacctggtagcctttttctatttc
atgctccatggaagggccctcctgctgagacccgtgaaaattattctccataagtgggat
tatctgattacatatgctgttctagtgattgccatgaagaaccttttaagtatcggagct
tgtgcctacttggagagattattgagttcccactgctggtttgtacacagttttagcata
tactgtacaatcagaggctatagcttgtcctttcctgatgatgaaaaatgtgaacctcca
gaacaggatgctgggatcctatgggatgctatatgtttcaccttcctgctaatacagagg
aggatttttacaagttactatcatctttatgtaatggctgatctaaaagttactgagatc
ttagcatccagaggagctgagatgtttgacttgaagtttaaaaagttgttggtgctccga
gaaaaagaagaggaaacgtcaaaactgttcatgatgaaacagatggagaaaatcaaattg
aaacagaagaaaattgacagtaggcaacagactgataagacccctgatgcttcagtggtt
aaagacagctattctccccagccaggagcaagacaaacacaagaaattctaatgcagaga
ataatcaatatcatcaaattttcatgggtctttggcaaagtgctgctggaggacaccaca
gcagcagtgcactccctgtacaaagaaagttgggaaatagccactgtgttgaggatggag
cggtgcatgctactgagaaggctcagtaagggggaaaaagctaccaaagagaatattttg
agatactaccatttaaagcttcaggaggaacagaaaaccacacttgtcaaaataaaggaa
aggaagacaggagcagaagaccaggggttacctgaagctgggttatctgagcactatagg
gacaacgcacagttaccaaatgagtcagaagaggcagtgattcctccaggggatcattgt
agagataaagatacttcaagtcaacaatcaccaagggaagagtttcagttacaggctgga
gaggggaaggactttgccaagaatgaccttgaggatctgccatcatcaatggggcatccc
ccaactggagaagacttgcaatcatttgaggagaccatagtactcaggggacctagggaa
ctctcagagatgggtgatgaccatgcaagtgatgatgagggaaatctgagtgagaaagat
gaatatgaacagtcagtttcagaacttgtttgtcaaggagccagcctatcctacagcagc
tcaatgcgatctcagcaaagaagttccttatcagaaggcaaagagttggttactgtctca
ctggggcagaagaagaaaagagtcaccagacctatgagaaaaactccattcccattttta
acagctggagatttactccttaaaagggttttttatgacagtgagcttgaagaggctgat
aagttctacaagaatctcccccggatggtgaagttgactttggagctgtacaaactgatc
gagtccaaatctgaaatgctctgttacttcatgatcatcctaaaccacatggtttcagct
tccattctgacactggtgctgcccattctgtgcttcttgtgggctatgctttctgttcca
aggcctcctaaatgtttctggatggctgctatcttttacacagaggcaacagtagtggtc
aaatatttttcacagtttggattctttccctggaccacaaagctctatgcaggcatacat
ggagaaaagccattttctctgccaaatgtagttgggattgaaaagaagagtggctatgtc
cactatgaccttgtgcaactgttggctttgttctatcataggtcagtcttgaagagtcta
ggactatgggatgagccatcctctgaccaggctaactgcaaagaaaagaaaaagatgaaa
aaatccaagaatcaaggacacagcagcagaaagcaggggggcttccctcagggttggcag
gcagagcctcatcctcagcccatcccctccctgcgggttttctggagaaaaaaacaaaca
cctttgggcacaggggagtccaaggacagaaaaatcaagaagataaagagctggttccgg
caattcccaatcaatgcaaagatgctgaagaaaaagctggtgaaagccagaaagctggta
actgaaactgccctccatatctattggaccattaaacagttcttctacaacatcatccat
ccagaattcagccccgtgtgtgatgtctatgccttcaagttcctggttgagagcatcaac
tttctcatcatcatctgcagatactgggcctttggaaaatactcagctgctgatctttct
gaaacactttctgaggaccaggttccagaagctttcttggcaatgatccttatacagtat
ggcagtatgattgtagatcgtgccatctacctgagaaaaaacatgtttggcaaatgcatg
tttcaggttgtcctggttattggagttcacttctggctgttcttcattcttccaggagta
accaaaaggagattcagtttaaactacgtggctcagatttggtacctggtcaaatgtatt
tactttggcttgtcagcctatcagatcaaatgtggctatccaaatcgtatcctgggcaac
tttctgacaaaaaacttcaattttctaaatctcttcctatttaaaggctttcgatttttg
cctttccttttggagctgagagcagttatggactggatatggactgatactgccctcagc
ctatctagttagatctgcctggaggacctatatgctggtgttttcatcatgaaatgctgg
agggaatctgaaaagaaatatccccattcactaggacagcagaagaaaaagattgtgaaa
tatggacagggtggtgtcattacttttgctctaattttcctcatgtggttcccactggtt
tttatgtctttgttgaagtcagtggggggaataaccaaccagcccttggatgtctccatc
aaaatttccatcagtggttatgagaccctttttaccatgagttctcagcagcaaaatctt
atcccattctctcagaaagcatttgacaacctgacagctcagtatgctttccatccggct
gccatgcagtttatatcaaactatcatccggaggacatcattgtggcaaagatcaaaagc
catgccagcctgctctggaacatcagccccgccaaccgagcagccatgatcactgagctg
tccacggccacagcgatttatgtgactttgatgtggactattcagagggcgctgcctcct
caaatgcattcatcacaccctaactttcatgatttaaacactattgtgtctgagaacttg
gactgtcacgtgaccccattaccatttggtaaggaaagaccccaggacattgacaagttg
gctttctacagaaacatcaccatccagctgcagcaagtagcagccaatgcgtcgtcctca
ggctctgggactacagagtggtgggttatacaggagtggaaacccagctgtgcaaagaac
caaggctgcagtcaggacctcgaaattatcatctacaatgacaaagtcagcccccagagc
ctgggcttccttgcgggatatggtattgtcgggttgtatgtgtctgtggtcatggttatt
gctaagttcatccgggaacacttcaatggcatctcccgttccatcatgtatgaggagctc
cccaatgtggaccgcatcctcaagctttgcaccgacatcttcctggtcagggaaatgggg
gactttgagctggaagaacagctcttctccaagctcatctttctgtatcgctccccagag
accatgatcaaatggactcgagaggcccaatccccttcccagcagccggtggatcagtga
DBGET
integrated database retrieval system
