Sarcophilus harrisii (Tasmanian devil): 100931108
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Entry
100931108 CDS
T02286
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X2
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03022
Basal transcription factors
shr05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100931108 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100931108 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100931108 (TAF4B)
03036 Chromosome and associated proteins [BR:
shr03036
]
100931108 (TAF4B)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100931108 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
100931108 (TAF4B)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100931108 (TAF4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
100931108
NCBI-ProteinID:
XP_023351956
Ensembl:
ENSSHAG00000016570
LinkDB
All DBs
Position
1:complement(488219769..488382731)
Genome browser
AA seq
854 aa
AA seq
DB search
MSSSPAAAAAAAAASVRGMPAGLSEQGAAAAAAASSPTGLGVPGTVTMAPALLTNGSVQS
HLPPAASSALPSSLRSTPAPLNTKAPVNLNLVTAASQPLVKTAPLGALVTKLATVNTVPK
ANPGPRLPAPQVVTAKAPNTTTIQLPANFQLSPGTVLIRSNSGQLMLVSQQALAQAETPS
PMNVRTAVPSSTHAVKICTVPNSGTQLIKKVAVAPVKTVTPVRAVTSVKAVAPVKAVTPV
KAVAAPVKTVAQLGNTVVTSLPKPSIVQTVTTPASVVTVTPVKPLNTITPLKPSVIATPA
TPSQESTQKVETPAAVQTSISVEMLENVTKCKNFLAMLIKLACGGSQSPEMGQNVKKLVE
NLLDAKIEPEEFTKKLYIELKSSPQPHLVPFLKKSVTALRQLMPSSQSFIEQCVQQTPSQ
VVIPTCATVTPPPPVVTTAVSSIHTEKPIHVSTAPTVGTVSIQTASPVAGTGGIGVVALR
SGSPVIGAGGPTVGAVAVHPINPASVPGGVTSKAVTLHSVVQQPSGGIVKQVTALPHSSA
LTTQKSGQKRMPLNTLIQTNQFPTASILKQITLPGNKILSLQAPAVQKNKIKENGTTSFR
DEDDINDVTSMAGVNLSEENACILAANSELVGTLTRSHKEEPFLFAGALQKRILDIGKRH
DIMELNSDVVNLISHATQERLRGLIEKLTIIAQHRMTTCKESENYVMSSDTRSQLRFLEK
LDHIEKQRKDEEEREMLLRAAKSRSNKEDPEQLRLKQKAKEMQQLELAQMQQRDANITAL
AAIGPRKKRPLDSVGSGVEGINGNAFAPGSSSLTVTRQLFRPRITRVCLRDLIFYMEQEK
GMKYSRALYHALLK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagccctgcggctgccgctgcagctgcagctgcctcggtcagggggatgccc
gccggcctttctgaacaaggtgccgccgccgccgccgccgcttcctccccgacggggctc
ggcgtccccgggacggtgaccatggccccggctcttttgaccaatgggagtgtccaaagc
cacctccctccggccgccagcagcgcgctcccgtcatcgctgaggagcaccccagcgccc
ctgaacaccaaggcccccgtaaatctcaacctggtgaccgcagcatcccaaccgctggtg
aagacggcccctctgggggccctagtgaccaaactggccactgtcaatactgttcccaaa
gccaaccccggtcccaggctgcccgctccccaagttgtgaccgcgaaagcccccaacacc
acgacgatccaattgcctgccaatttccagctctcacctggaactgttttaataagaagt
aacagtggtcagctgatgttggtgtctcaacaagctttagctcaagctgaaacgccaagc
cctatgaatgtaagaacagcagtaccatcaagtactcatgcagtcaaaatttgcactgtg
ccgaactctggtacacagttaattaagaaagtagcagttgctccagtcaaaacagtgact
ccagtaagggcagtgacctctgtcaaggcagtggctccagtaaaggcagtgacacccgtt
aaagcagttgctgcccctgtgaaaactgtggcgcagttaggaaatactgtggtaacttcc
ctcccgaaaccttccatagtacagactgtgactacaccggccagtgttgtcacagttacc
ccagtaaaaccattgaatactataactcccctgaagccttcagtcatcgcaacaccagca
accccctcacaagagagcacccagaaagttgagactccagcagctgtacaaactagtatc
tctgtggaaatgctagagaatgtgacaaaatgcaaaaactttcttgcaatgttgataaaa
ctagcatgtggtgggtctcagtccccagaaatgggacagaatgtgaagaagcttgtggaa
aatctcttggatgcaaaaattgaaccagaggaatttaccaaaaagttgtacattgaactc
aagtcctcacctcaaccgcatcttgtcccttttctaaagaaaagtgtgactgccttacga
cagctaatgcccagctcccagagcttcattgagcaatgtgtccagcaaactccttcacag
gtcgtcattcctacatgtgctacagtcactcctcctcctcctgtagtgacaacagctgtt
tcttccatccacacggaaaagcccatccatgtttcaacagcaccaacagtgggcactgtt
tccattcagactgcgagtcctgtggctggtactggaggcattggagttgtcgcccttcgc
tctggaagtcctgttattggagcgggaggacccacagtcggagctgttgctgtccacccc
ataaatccagcttctgtcccaggaggtgtgactagcaaggctgtcacactccattctgta
gtacagcagccttctggaggcattgtcaaacaagtgactgccctaccacattcttcagcc
ctgactactcagaaatctggacaaaagaggatgcccttgaatacactaatacaaacaaat
cagtttcctacagcttccatactaaagcaaattactctgccaggaaataaaattttgtcg
cttcaagcacctgctgttcagaaaaacaaaataaaagagaatggaacaacatccttcaga
gatgaagatgacatcaatgacgtcacttccatggcaggagtcaacctcagtgaagaaaac
gcctgcatcttagcagcaaattctgaattagtcggcacactgacccgttctcataaagaa
gaaccattcctttttgcaggagctctccaaaagagaattttagacattggtaaaaggcat
gacattatggaacttaactctgatgttgtgaacttgatctcccatgctacacaggagcga
ttacgaggccttatagaaaaactgactataattgctcaacatagaatgacaacctgcaag
gaaagtgaaaattatgtcatgtctagtgataccagatcacaacttagatttcttgagaag
ctggatcacatcgaaaagcaacgaaaggatgaagaagaacgagagatgttactcagagca
gctaagagtcgttctaataaagaagatccagagcagctgcgattaaagcagaaagccaaa
gagatgcagcagttagaattggcacagatgcagcaaagagatgccaatatcacagccctt
gcagccattggaccaaggaagaagagaccactggactctgttggatctggagttgagggt
ataaatggcaatgcctttgccccagggtcatccagcctgactgtcaccaggcaattattt
cgcccaagaataactcgagtttgcctcagggatttgatattctacatggaacaagaaaaa
gggatgaaatattcgcgagccctctaccatgctcttttgaagtga
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integrated database retrieval system
