Sarcophilus harrisii (Tasmanian devil): 100931372
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Entry
100931372 CDS
T02286
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
shr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100931372 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100931372 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100931372 (SS18)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100931372 (SS18)
GBAF(ncBAF) complex
100931372 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100931372
NCBI-ProteinID:
XP_031802357
UniProt:
G3WXK2
LinkDB
All DBs
Position
1:488485383..488581357
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTTECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMSSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSNHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQPYPG
QQQGYGPSQSGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcattcgcagctccgaggcagcggggcaagggagaaatcacccccgcggct
attcagaagatgttggatgaaaataaccatcttattcaatgtataatggattatcagaat
aaaggaaagactacagaatgctctcagtatcaacagatgttgcacacaaatttggtttat
cttgctacgatagcagactccaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtccaggagggatgaatcagagtggccctcccccacctccacgt
tctcacaacatgtcttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggccaaaccatatgcctatgcagggacctggaccc
aatcagcttaatatgacaaacagttctatgaacatgccttcaagtaatcatggttccatg
ggaggttacaaccattcggtgccatcctcacaaagtatgccagtacagaatcagatgaca
atgagtcaaggacagcctatgggaaactatggccctagaccaaatatgaacatgcaacca
aaccaaggtccaatgatgcaccagcagcctccttcacagcagtataatatgccacaggga
ggtggtcagcattatcaaggacagcagcctccaatgggaatgatgggtcaagttaatcaa
ggaaatcatatgatgggtcaaagacagattcctccttataggccacctcaacaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggagggaattcacagtatggtcagcagcaagatgcatatcaaggaccacct
ccacaacaaggttatccaccacaacagcagcagtatccaggtcagcagccttatccagga
cagcaacagggttatggtccatcacagagtggtccaggaccacaatatcccaactatcca
caaggacaaggtcagcaatatggggggtacagacctacacagcctggaccaccacaacca
ccccaacagaggccttatggatatgaccagggtcaatatggaaattaccagcagtga
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