Sarcophilus harrisii (Tasmanian devil): 100931532
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Entry
100931532 CDS
T02286
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X3
KO
K13091
RNA-binding protein 23/39
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100931532 (RBM39)
Spliceosome [BR:
shr03041
]
Common components
Common spliceosomal components
General mRNP proteins
100931532 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
100931532
NCBI-ProteinID:
XP_012408603
Ensembl:
ENSSHAG00000018608
LinkDB
All DBs
Position
2:complement(422642451..422667902)
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AA seq
524 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQSEVTALAAAASVQPLATQCF
QLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA
AVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPVRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatatagaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagagcgtagcaagaagagaaaaaaaagcaagagt
agaagtcgaagtcatgaccggaagaggagcaaaagtaaggaaaggaaacgaagcagagac
cgggagaggaaaaagagcaaaagccgtgaacggaaacgtagccgaagtaaagaacgaaga
cgaagtcgttctagaagtagagaacgccgattcagaggccgctatcgaagtccctactcc
ggaccaaaatttaacagtgccatccgtggaaagattgggttgcctcatagcatcaaatta
agcagacgccgctcaagaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctatcgacaaccttactccagaggaaagagatgctaggacggtgttctgtatgcaactg
gcagcaagaattagaccaagagatttggaggagtttttttctactgtaggaaaggtccgt
gatgtaagaatgatttctgatagaaattccagaagatctaaaggaattgcttatgtagag
tttgttgatgttagctcagtgcctctagcaataggattaactggccagcgggtcttagga
gtgcctatcattgtacaggcctcacaggcagaaaagaatagagcagcagcaatggcaaat
aacctacagaaaggaagtgctggacctatgaggctttatgtaggatcattacattttaac
ataactgaagatatgcttcgtggaatctttgagccttttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggtcgatctaagggatatggatttattacgttttcagat
tcagaatgtgccaaaaaggcattggaacaactgaatggatttgaattagcaggcaggcct
atgaaagttggtcatgttactgaacgtactgatgcttccagtgccagttcatttttggat
agtgatgagctggaacgaactggaattgacttgggaacaactggtcgtcttcaattaatg
gcaagacttgcagaaggtactggtttacagattcctccagcagcacaacaggctttgcaa
atgagtggatctttagcatttggagctgtagcagatttacaaaccagactttcccaacag
agtgaggttacagctctagctgcagccgcttctgtgcagcctcttgcaacacagtgtttc
cagctttccaatatgtttaatcctcaaacggaagatgaacttggctgggatacagagatt
aaagatgatgtaattgaagaatgtaacaaacatggaggagtaatccatatttatgttgac
aaaaattcagctcagggcaacgtttatgtgaagtgcccctcgattgctgcagccattgct
gcagtaaatgcattgcatggaagatggtttgctggtaaaatgattacagctgcatatgta
cctcttccaacttatcacaacctcttccctgattccatgacagcaacacaactactggtt
cctgttcgacgatga
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integrated database retrieval system
