Sarcophilus harrisii (Tasmanian devil): 100931597
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Entry
100931597 CDS
T02286
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shr03037
]
100931597 (CFAP54)
Cilium and associated proteins [BR:
shr03037
]
Motile cilia and associated proteins
Sperm associated proteins
100931597 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
100931597
NCBI-ProteinID:
XP_031795651
LinkDB
All DBs
Position
5:complement(28919226..29218734)
Genome browser
AA seq
3231 aa
AA seq
DB search
MDTLKVPEELTPTSTSSSASPSSSSGGSGSESSPTRSTSPVLKVSMPAVYPNLQSENLSV
YRSPPPESDQAEAPAPPEPALPALPAPKHRKAATETPTLLSITRPLPIRALLKRYLERRE
YLEYEGGIPQPSPLRASYITELPAASFYGPLDAKNPLLVNFEKEVQGVLGFLRRKQGQDS
TLQDRQNFQHRGANTLFKIWNKYESRLPSDYYYKQLLKVGDSLVKIQEYKLALSQCYRRY
LCQFDCPIEEDMEVSQFKRIFFPNDLEDQNSKLTFRALEGKCLCLYHVICADDPHFGNEL
SVHQCFDILSTWRLIMQVALSFEKLCWIVYNGTIHIYRICRKLMVIGLSAKALEYLLWAS
ISMESSTTLLGVRYLTWRATLYTAVSQCYYDCQIGTQGEIFARRGLGKIDELLHLQVISL
TPPRQESKKCFREATIKMAVMIFKRAVFEPRRKTKFFIRTKPRINLREIQNMQWPRTTTE
KLLTEMFDSTSAQFLAVLEAITEPRRRVLQTGPPISEELEVREVYAELFMAGGELFSDIS
GGPIVCGKFDFFRTVYSNSTQLKLVIDGKDGVSIAAAGKMIKLSFTYEEWNLFNCTAVQF
IKFLQSRKDPASKKMEMELRLLAAMEPLINVKRNKGLAFGGEGGSSATEGVRGGTKKIAF
QESHLLSGSYSDDIFHLGSMLYSFTCSSTEKVQPDNEIIVDLIMFLWQKCKMGIQRIYSL
KMDYFKFVQKVKASKWVHLLWQINEMIHTCQLEYLSPVIVAEVALRLSEILESLGNPAKK
FKKCSGFGNKNYFDQNFFQKGCSDILQILKKSPEEQLLLAYEVLGQAITMIGMSRTRTTL
PNGTSVYDHCYTKVIPPTEEKVDKPFTANSFIMDLQLEIIMTQHQIAVALLDQLKAWDTP
LQKTPKEAPSTQASTTTSYFTESYVLGKINKNRLSKASYLMQKALLLFEKDPHQDPKLLE
EALSLIKKTESEQSALHSYQKDAEDAKIPIGKVPSPPILLSRTHCSVIFKPAPFISEKKV
SWYTIFGCPVGTCIGKVRLNNCFLANSGQPVPANEKTLLKIVGLEPNEKYIFAVAAYDSK
GELLGKAIGETSKPILIYMPLSTVTTRLYLTEVAYQIGKYSLAKKTFAPVWDYFVYTSPT
NLSIISLNSALTIIPYRLRADALSESSSVLLYHFLRCIFVTSNINIVEQKLFCDTIKGND
VFTCQQASRIAECQRMLVAIELSTYLNDLSYSLQAIVQCYGLLAPLIFHNIVLVPVIQIL
IKCLIVLQEIPNTSFHKKQMGNFDSIQHMIACSVYYTTKVLRSWKEFDLAVIIINFGKKL
LDTTQGLFSNVTKTSFSDDEQEELLDEGISVKKVKKSRAHIVMLDKISEQLNLMEVQLLK
LTKQYPFVELTGTEDPLFLYPIILTWTLRGAMREVMKFKNKPRFLEFFVQVMTKCLHEEK
FHYVVEMAYTVQNYLKRRNENFLGFKKAAATESTTTHEDHKKYKAAAMEIQKSTELQLVK
PKNKKDVLREYFAKHHSLLGMPDLEKFKRGDVRKLALKILLEFLSPKAVCYIKRKRLHQL
FIEELPWRAQMNLHLAHAHFSLFKIKLMERKKIKVYNSQNTMSFRTLDPDTFLLYNSGAL
LAEENVNTENYKAMLEFLLSSKIRKTNMSDIDEFSYSSSKMSEGESPKVVVSTELETNLK
DRTGNLGILDNFIRTFMHCKRAVVLAHRGGYWTLLQNASRILWNYTLEVQMLFQQTHAFS
RSFPVSKDALLCTFVLPYYLTSEALLDMLVELQHSKSLKILDDNKDFGVPSAYGSIEDDN
GGFNLTFEDPFDDMNLVDMKYISDFIFKTLEILYRVGKWESLAHIALHFNEITHERYTEQ
VTPLLVYAQRNLLERIKKFSGQNTIKIENEIEDKINLRHIIGKQPHPAFQPNEAGWREGF
IDFDQARVHSEMYQANRLMSVPLNVKETLRYFRETLGKSKHCNRSLRYSRKLLALFLAHT
QENSGGINNPKFFSGKVEFDVGVEEIYLPTPPDLSTEKFAVSTSVESKKLSPSQFQLVIS
SYEKTIDILEISNQIDLKIQALHELGNLHIYAENRRAAYKCWSQALDAILKKPDVLHTWK
ELANPPKTPLDMVMDANFIGYSEEFLLKAGVWGCLLGGIIAAKMAQYILISNVSERTECC
IFSSFFFKGLLKTSLIYPKYDHEYAQYEISQLTPGLDLFCDQHRVNVNMVLSSLTYLSYE
LHSVNQNLIVLPLLSLYQYFVSEVCQDVCKCMDIKLLKIEVLIDLGLLSEAYNEIYNLCP
GKGSFCTTLTGSKNWGKTKPVTQPFETGKFYMSKGNIQALEDLLNRGHPGCATTLCHPAL
NYKFTLVKMRFFISLAATINCLPESDVKSFFQDGSERSKIQIVLNKENAKDEPISFITLT
KAKEDLTPSKLKGILLTEAEEKLLMLIENAESAIHKRIIQFNPVELEIMIEVKLQLAAIA
LQRQQAPFSISIAFTAIKVLQNAEIFRKTKEEVFKCQDELDALEPLGMTAREHLNIRMWL
KCRLALLRASVAHIRGMGVMKENDVTDCRILINEVLTETQDWNDTEMQAEVLVQAIKLGL
QERHSAAEIIKYLQDIIHLLQGKPFVSPRGIIILIKSLVLMDDLMKIEEPQKYLSPGNEN
FTLLNQAHELIIEQVLSLGEMIKLASSDAEYPSIVYPLKNIFLPHIHLMAKVKMRIAHML
AKQAASSQERNPSQWLPIIHLFEIALLHCRTAAIEGELEAEILFEKGKLERQIFMADETR
NISYDLFDAIKISLKNDQNSGLIRKSYLEIALLYFHLGSLKQSSLKNKVSVQSQIPIKEA
ILEKNDVYLILSWMAIRAASQVSEATIAAQKLIGQKSIMLEKIKMIFYQNIPEFAVVDLT
STYIDYLTASFKAVFKSPFPSPNQSDDILDTSVLGQEFETTESEEIEEQMPDISWVHLVR
YYTHLLRINNMNTLLASPKPVFLADEIFYTSIFNEDLVLRQKEMHSFLKKFLSLFITACI
EPFPKDLASVERALNIEKSQYRQSLKVGQEISVLVEKFATSKTATPTESLVDFSVYTVSK
DLCFQWYLPPLEKAPKETEPMIMLLYAFNTKPVKISDVFEFNSSFLYSGFFWVPLNKVME
LHDKLSDLRQKAEILLYTYPLSPDGPLTSAQITPDIPENILLTKEMKDLFFECCTEIEFL
LLRREGLSLQEELPSEATLSTVMKLEMLFDPSNGCVLKSEDIFKWITALLK
NT seq
9696 nt
NT seq
+upstream
nt +downstream
nt
atggatactctaaaagtcccggaggagttgaccccgacctcaacctcgagcagtgcctcc
ccaagctcgtcttccggcggctcggggtccgagtcgtccccgacccgcagcacgtcgccg
gtgttaaaagtgagcatgcccgccgtgtaccctaacttacagtcggagaacctctccgtc
tacaggagcccgcccccggagagcgatcaggcggaggccccggccccgcccgagcccgcc
ttgccggccctgccggcccccaagcatcgcaaggccgccaccgagactcccacgctgctg
tccatcacgcggccgctgccgatccgggcgctgctcaagcgctacctggaacgccgcgag
tacttggagtacgaagggggcatcccgcagccctcgccgctcagggccagctacattacc
gaactgcccgcggcctccttctacgggcccctggacgccaaaaaccctctgctcgtcaac
ttcgagaaggaggtgcaaggcgtgctgggtttcctgcgcaggaagcagggccaggactcc
accctccaggaccggcagaactttcagcaccgcggtgccaacaccctgttcaaaatctgg
aacaagtatgagtcccgcctgccgtctgactattactacaagcaacttttgaaggttgga
gacagcctcgttaaaatacaggaatacaaactggccttgtcacagtgctatagaaggtat
ctttgccagttcgactgccctattgaagaagacatggaagttagtcaattcaaaaggatc
tttttccccaacgacctggaagaccagaattccaaactaacatttcgtgctttagaaggg
aaatgcttgtgcctttaccatgtgatctgtgccgacgatccccattttgggaatgagctg
agtgtgcatcagtgctttgacatattgtcgacttggcgactcatcatgcaagtggccctc
tccttcgagaaactctgctggatcgtctacaatggtacaattcacatatataggatttgc
aggaagctgatggttattggactgtctgcgaaggccttggaatacttgctctgggcaagt
atctctatggaatcctccacaaccctcttaggggttagatatctgacttggagagctacc
ctttacactgctgtttcccagtgctactatgactgccaaattggaactcagggagagata
tttgctcggcgaggcttgggaaaaattgatgaattattgcacttacaagtaataagcctt
acaccaccacggcaagaatcaaaaaagtgctttagagaagccaccataaagatggcagtg
atgatcttcaagagagcagtatttgaacctcgaagaaagaccaagttcttcataaggacg
aaaccaagaattaatttacgggaaatacagaatatgcaatggccacgcactaccacagaa
aagttgttgactgagatgtttgacagcacctctgcccaatttctggctgtcttggaagct
attacagaaccgagaaggcgagtgctgcaaaccgggccgcccatctcagaggagctggag
gtccgtgaagtctatgctgagctcttcatggcaggaggcgagctcttctcagatataagt
ggtggtcccatagtctgtgggaagtttgactttttcagaacagtctattcaaattctact
caactgaaactagtcattgatgggaaagatggagtttctatagctgctgcagggaagatg
ataaaattatctttcacctatgaggaatggaatttatttaattgcaccgctgttcagttt
atcaaattcctccagagtcgaaaggaccctgcttcgaagaaaatggagatggagttaagg
cttctggctgcgatggagcccttgatcaacgtaaagagaaataaaggcttggccttcggt
ggggaaggaggcagcagcgccacggaaggtgttcgaggtgggacaaaaaagatcgccttt
caggagtctcacttgttgtctggaagctattctgatgatattttccacttgggatcaatg
ctatattccttcacttgttcatctactgagaaagttcaacctgataatgagatcattgtt
gatctgattatgttcctgtggcagaaatgcaaaatgggaatccagcgaatctattcgttg
aaaatggactatttcaagtttgtccagaaagtcaaagctagcaagtgggttcatctgctt
tggcagataaatgaaatgattcatacttgtcagttggaatacctcagccctgtgattgtg
gctgaagttgcattaagactaagtgaaatattggagtctttaggaaacccagcaaaaaaa
tttaaaaaatgttcaggctttggaaacaaaaattattttgaccaaaacttcttccaaaaa
ggttgttctgatattcttcaaatattaaagaaatcacctgaagagcaattacttttggct
tatgaggttctcggccaagccattacgatgatagggatgtctcgtacaagaactacattg
cccaatggaacatcagtatatgatcattgttataccaaggttatccctccaacagaagaa
aaagttgacaagccatttacagccaatagtttcatcatggacttgcaattggagatcatt
atgactcagcatcagatcgctgttgcgcttcttgaccaactcaaagcttgggacactcct
ctccagaaaactcccaaagaagctccaagtacacaagcgtctaccaccactagttatttc
acagaatcatatgtactgggaaaaatcaacaagaatcggctatctaaagcaagttacttg
atgcagaaagctctgctattatttgagaaagatccccaccaggatcccaaattactagag
gaagcattgtccttaattaagaaaactgaatcagagcaaagtgccctgcactcatatcag
aaagatgcagaggatgctaaaatacccattggcaaagttccttctcctcctatactgcta
tctagaactcattgttcagtgatatttaaacctgctccatttatttccgaaaaaaaggtt
tcttggtataccatttttggatgtccagtgggaacgtgtattggaaaagtaagactgaac
aactgttttcttgcaaactctggacaaccagtaccagctaatgaaaaaacccttttaaaa
attgttggtttagagcctaatgaaaaatacatatttgcagttgctgcttatgactctaag
ggagaactgttagggaaagcaattggagagacgtctaagccaattctgatttacatgcca
ctttctactgttactactcgcttatatttgactgaggttgcctatcaaattggtaaatat
tcattggccaagaaaacctttgcaccagtttgggattattttgtctatacttctccaaca
aatttatccattatttctttaaacagcgcattaactattataccatacaggttacgtgca
gatgccttgtcagagtcttcatcagttcttttataccatttcctgagatgtatttttgta
acaagtaacattaatattgtggagcaaaagcttttctgtgatactattaagggaaatgat
gttttcacctgtcaacaagcttccagaatagctgaatgtcagagaatgctagtggcaatt
gaacttagtacctatttaaatgatctgagttattccctacaagccattgttcagtgctat
ggtctcctggcccctctaatctttcacaacattgttctggtaccagtaatccagattcta
attaagtgtttgatagttttgcaagaaatcccgaatactagctttcacaagaaacaaatg
ggaaattttgatagtatccagcatatgatcgcatgttctgtttattacacaacgaaggtg
ctgcgttcgtggaaggaatttgaccttgcagtgataattataaattttgggaaaaagctg
ctagacaccacacaagggttattttcaaatgtcactaaaacttcctttagtgatgatgag
caagaagaactgttagatgagggtatctctgtcaagaaagtgaagaaatccagggcacac
attgtcatgctggacaaaatcagtgagcaactcaatctcatggaagtgcagctactcaaa
ttgacaaaacaatatccctttgttgaactcacaggaacagaagatcccctttttctctac
cctataattttaacttggacactcagaggtgccatgagagaagtaatgaaattcaagaat
aaacctcgttttctggaattctttgttcaagtcatgacaaaatgtcttcatgaagagaaa
tttcactatgtggtggagatggcatatactgttcaaaactatctaaaaaggagaaacgag
aactttcttggatttaagaaagctgcagctacagaaagtactacaactcatgaagaccat
aaaaagtacaaggcagctgccatggaaattcaaaaatccacagaattacaacttgtgaag
ccaaaaaataaaaaagatgttctacgagagtattttgccaagcaccactcattgttagga
atgccagatttggaaaaatttaagagaggtgacgttagaaaattggctttaaaaatcctg
ttggagttcttgtccccaaaagcggtttgctatataaaaagaaaaagattgcatcaatta
tttattgaggagttaccctggagagctcagatgaatttacatttggcacatgctcatttc
agcttgttcaaaatcaaactcatggagcgtaagaagattaaagtttacaattcacaaaat
acaatgagctttcgaactttagaccctgatacattcttactctacaattctggagcactg
ttggcggaggaaaatgttaatacagaaaattacaaagcaatgcttgaattcctgctttca
agcaaaataaggaagactaacatgtcagatattgatgaattttcttatagcagctccaaa
atgagtgaaggagaaagccccaaagtagtggtttcaacggaattagaaactaatcttaaa
gatcgaacaggaaatcttggaatcttggacaattttatcagaacctttatgcattgcaaa
agagcagtggttctcgctcatcgtggtggttattggaccttacttcagaatgcctcccgg
attctttggaactacaccttggaagtacagatgctctttcaacagacacatgctttttcg
agatcatttcctgtcagcaaggatgctctcttatgcacatttgtgttgccatattatttg
acatcagaagccctccttgacatgctggtagaactgcagcatagcaaatctcttaagatt
ttggatgacaataaagatttcggtgttcccagtgcttatggaagcattgaagatgataat
gggggctttaatctgacttttgaagatccttttgatgatatgaatttggttgatatgaag
tatatttctgacttcatctttaaaactttggaaattttgtacagagtgggaaaatgggaa
tcactagcacatattgccctccatttcaacgaaattacacatgagaggtataccgagcag
gtgacaccattgttagtctatgctcagagaaaccttttggagagaatcaagaaattcagt
ggccaaaatacgatcaagatagaaaatgagattgaggacaagataaacctccgccatatc
attggcaaacagccccatcctgcttttcagcctaatgaagcaggatggcgtgaaggcttt
attgattttgaccaagctagagttcattcagagatgtatcaagcaaacagactaatgtcg
gtacccttgaatgtgaaagaaacgttgaggtactttagagaaactttggggaaatctaag
cactgcaacaggtctctgagatatagcagaaaactgcttgctttgttcctggctcacaca
caagaaaacagtggaggaataaacaatcccaagttcttttctggaaaagtggaatttgat
gttggagttgaagagatatatttaccgacaccccctgatctttccactgaaaagtttgct
gtttctactagcgtggagagcaagaagctttctccttcacaatttcaacttgttatatct
tcttatgagaaaactattgatattcttgaaatcagcaatcaaatagatctcaagatacag
gcattacatgagcttggaaatcttcacatctatgcagaaaacagaagggcagcttataaa
tgctggagccaagcccttgatgccatcctcaaaaaaccagatgttctccatacatggaaa
gagttggccaacccccctaaaacccctcttgatatggtcatggatgcaaacttcatcggt
tacagtgaggaatttctgttgaaagctggtgtttggggatgcttgctgggaggcattata
gcagcaaaaatggcacaatacattttgatatcaaatgtgagtgagaggactgaatgctgc
attttctcttcctttttttttaagggcctgcttaaaacctctctaatctatcccaagtat
gaccatgagtatgcccagtatgaaattagccagctcactccgggcctggatcttttttgt
gaccaacacagagtaaatgtgaacatggtcctcagcagtctaacttatctcagttatgag
ctccattctgttaaccagaaccttattgttctaccgctcctttcattataccaatatttt
gtctcagaagtttgccaagatgtatgtaaatgcatggatataaagcttcttaagattgaa
gtccttattgacttaggattactttctgaagcttataatgaaatatataatctttgtcct
ggaaaaggcagcttctgtaccacccttacaggttccaaaaattgggggaaaactaagcca
gtcacacagccatttgaaacaggaaaattttatatgtccaaaggaaatatacaggccctg
gaagacttattgaatcgaggccaccccggatgtgcgactacactctgccatccagcctta
aactataagtttactttggtcaaaatgcgctttttcatcagtctggcagcaacaataaat
tgcctgccagaaagtgatgtgaaatcattcttccaagatggttccgaaagaagcaaaatc
cagatcgtgttaaacaaagaaaatgcaaaagatgaacctatatcattcattactctgacc
aaggccaaagaggatttgactccaagtaaactaaagggaattttacttacagaagctgaa
gaaaagcttctcatgctgatagaaaatgcagagtcagccatccacaagaggataattcag
tttaacccagtagagttagagatcatgattgaggtcaagctacaactagccgctattgca
ttgcagagacaacaagcgccattcagcatttcaatagcttttactgcaattaaagttctt
cagaatgcagaaatttttcgaaagacaaaagaagaagtttttaagtgccaggatgagctt
gatgccctggagcctcttgggatgacggcccgagaacatctgaacattcgcatgtggctg
aagtgccgcttggccttgctgagggcctctgtggcacatatccgcggcatgggggtcatg
aaagaaaatgatgtgactgactgtagaattctgataaatgaagtgctcacagagacacag
gattggaacgacactgagatgcaggcagaggttctggtgcaggccatcaaacttggtcta
caagaaagacactctgcagctgagatcataaagtatctgcaggacataatacatttactt
caaggaaaaccttttgtttctcctcgaggcataataatacttataaagagcctggtcttg
atggatgatttaatgaaaattgaggagcctcagaaatatctctctcctggaaatgaaaat
tttactttgttaaatcaggctcatgaacttattattgaacaggttctatctttgggtgag
atgattaaattggcttcttcagacgctgaatatccaagtatcgtttatcctttgaaaaac
atttttcttccacatatccacttaatggcaaaagtaaagatgagaattgctcatatgtta
gccaagcaagcagcttcctcccaggaaagaaatccttctcaatggctacctatcattcat
ctttttgagatagcattgcttcattgtaggacagctgcaatagaaggtgaattggaagct
gaaattctttttgaaaaaggcaaattagaacgtcagatatttatggcagatgaaacaagg
aatatatcctatgacctctttgatgctataaaaataagtctgaaaaatgatcaaaattca
gggttgataaggaaatcctacctggaaatagccctgttatattttcatttggggagtctt
aagcaatcctctttaaaaaataaggtttctgttcaaagccaaattccaataaaggaagca
atattagagaaaaatgatgtgtacctgatattgtcctggatggcaatccgagctgcttcc
caggtcagtgaagctacaatagctgctcagaagctaattggacagaagagtattatgttg
gagaaaattaaaatgatcttctaccagaatatcccagaatttgctgttgtggacctcact
tctacatatatagattatttgactgctagttttaaagctgtcttcaagtcccccttcccc
tctccgaaccagtctgacgacattctggacacatcagttttgggacaagaatttgaaacc
actgagagtgaagaaattgaagaacagatgccagacatctcctgggtccacctggtccgt
tactacactcacctgctaagaattaacaatatgaatacccttcttgcttctccaaagcca
gttttcttagcggatgaaatattctacacttccattttcaatgaagatctggttttacgt
cagaaagaaatgcacagtttcctcaaaaaattcttaagtctttttattacagcctgtatt
gagccatttccaaaagatcttgcctccgtagaaagagcattaaatatcgaaaaatctcaa
tataggcaatcgcttaaggtgggtcaagaaatatctgtgctagtagaaaaatttgcaacc
tctaagacggcaactcctacagagtctctagtggatttttctgtatatactgtaagcaaa
gacctttgctttcagtggtacctgccccctctagaaaaagctccaaaagaaacagaacct
atgataatgttactatatgcttttaacaccaaaccagtcaagatttctgatgtctttgag
ttcaattccagctttctatattctggatttttctgggttcctctgaacaaagttatggaa
ttacatgacaaactctctgaccttaggcaaaaagctgaaatattgttatatacgtaccca
ttgtctccagatggacccctcacttcggcacaaatcactccagatatcccggaaaatatc
ttactcactaaagaaatgaaggatctattttttgagtgttgcactgaaatagaattccta
cttttgagacgtgaaggtttatccctacaagaggagctaccatctgaggcaactttgtcc
acagtaatgaagctggagatgctttttgatccctctaacggctgtgtcttaaagtcagaa
gacattttcaagtggattacagctcttctgaaataa
DBGET
integrated database retrieval system
