Sarcophilus harrisii (Tasmanian devil): 100931618 Help Entry 100931618         CDS       T02286                                  Symbol COL4A5 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism shr  Sarcophilus harrisii (Tasmanian devil) Pathway shr04151   PI3K-Akt signaling pathway shr04510   Focal adhesion shr04512   ECM-receptor interaction shr04820   Cytoskeleton in muscle cells shr04926   Relaxin signaling pathway shr04933   AGE-RAGE signaling pathway in diabetic complications shr04974   Protein digestion and absorption shr05146   Amoebiasis shr05165   Human papillomavirus infection shr05200   Pathways in cancer shr05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:shr00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100931618 (COL4A5)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100931618 (COL4A5)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100931618 (COL4A5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100931618 (COL4A5)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     100931618 (COL4A5)   09154 Digestive system    04974 Protein digestion and absorption     100931618 (COL4A5)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100931618 (COL4A5)   09162 Cancer: specific types    05222 Small cell lung cancer     100931618 (COL4A5)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100931618 (COL4A5)   09174 Infectious disease: parasitic    05146 Amoebiasis     100931618 (COL4A5)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100931618 (COL4A5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:shr04147]     100931618 (COL4A5)    00536 Glycosaminoglycan binding proteins [BR:shr00536]     100931618 (COL4A5) Exosome [BR:shr04147]  Exosomal proteins   Exosomal proteins of other cancer cells    100931618 (COL4A5) Glycosaminoglycan binding proteins [BR:shr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100931618 (COL4A5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 DUF7455 Motif Other DBs NCBI-GeneID:  100931618 NCBI-ProteinID:  XP_031800822 UniProt:  G3WDY8 LinkDB All DBs Position X:complement(18908356..19122550) Genome browser AA seq 1673 aa AA seqDB search MRAAAGLLCFLGLSQWGWPVDAAACHGCSSGPKCDCSSVKGEKGERGLPGLEGHPGLPGF PGAEGPPGPPGQKGDDGAPGPVGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGC NGTKGERGFPGFSGIPGLPGPPGRPGIPGVKGQPGSIILSTALGPKGDPGDPGLPGRQGP AGMTGSPGPLGSPGLPGWMGPPGPPGIQGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQI GEMKRPNETELLKGDQGAPGDQGSPGLPGLQGPPGLPGGVKGEKGWPGEPGQKGKPGRDG ASGLPGMQGLPGDPGVPGKPGRGGEKGQKGDTGPPGPPGLVLPRGGTGEKGNLGLPGLPG EKGDQGSPGAPGLPGLPGPPGPTVTGPPGPPGFPGERGEKGAKGLPGVPVPGQPGCDGQP GAPGLPGTPGKPGPHFPNGAVCEKGARGPPGSPGDRGVPGEQGVKGDKGDTCLNCIEAGL PGLPGEPGLPGPPGLTGARGFPGQKGAKGNAGAIGPVGSPGLPGVPGASGEPGSKGSPGD TISFPEMKGDKGDAGLPGASGIPGLPGSPGKDGLPGLPGIKGKPGGFALKGERGPPGKPG LPGLPGTRGPMGLPGLGLPGPMGKKGIPGMAGNPGPPGIPGAKGDPGPTISQPGPPGLPG LPGRDGDVGLPGDPGFPGVPGLPGIPGSKGEPGRPGIGLPGPPGPKGYQGMPGPPGTPGA PGRRGLQGAPGHPGLPGPKGEPGVGLPGPPGLKGLPGVKGAPGPKGSTGFPGLSGIPGLP GLDGPAGPKGDPGTIGQPGFMGPSGPPGMGRPGHPGPPGVPGSLGQPGLPGHPGGKGDPG PPGFDVSGPPGERGHPGLPGIPGVMGLQGFPGSPGRDGAPGLSGAKGEMGKLGPPGPPGP LGIPGRSGVPGLQGENGLPGQPGFPGPVGQKGGKGETGIPGPPGQVDPNYPKVKGEKGDP GLPGVPGPLGPKGSHGHPGDPGQPGLDGQPGSPGAPGPKGNQGLPGRPGPVGPPGLKGCI GEMGFPGLQGVQGSPGVPGVAGQPGSPGFPGQNGEKGAPGIGGIGRPGLPGPKGDPGLPG YPGTPGSQGALGDTGSPGAPGSPGAKGQPGLPGRPGITGLPGPRGMDGPSGSPGIPGQSG PVGSQGHPGPPGSPGEKGKPGQDGIPGPAGQKGEPGQPGFGLPGPPGISGFPGEKGDEGS PGTPGSPGPQGPKGERGFPGFPGIQGPPGPPGSPGQNREGPKGNPGPRGHPGRAGPKGPR GVAGNGRAKGKRGDPGLPGKPGLPGLKGERGPPGPQGDPGWPGFIGMKGNPGIQGIPGFQ GMKGPPGAPGSAGPAGAPGPRGPSGSPGFPGPSEKDIIIKGDIGPPGLPGLPGLKGPVGI PGPPGFPGPTGPAGDPGRNGRLGINGPVGPKGDPGPSGQPGNRGVDGSPGSEGLPGLPGP PGTLSLAHGFLITRHSQTTHIPQCPQGTVQIYTGFSLLYVQGNERAHGQDLGTSGSCLHR FSTMPFMFCNINNVCNFASRSDYSYWLSTSKPVPMNMEPLSGQSIVPFISRCSVCEAPAM VIAVHSQTTQLPYCPQDWDSLWTGYSFMMHTSAGAEGAGQTLASPGSCLEEFRPAPFIEC HGRGTCNYYANSYSFWLATVEASDMFSKPQPETLKAGDLRTRISRCQVCMKRT NT seq 5022 nt NT seq  +upstreamnt  +downstreamnt atgagggcggccgccggcttgctctgcttcctgggcctgagccagtggggttggcccgtc gatgcggccgcttgtcatgggtgttcatctggacccaaatgtgactgcagtagcgtaaaa ggagagaagggagagagaggacttccaggtttggaaggccacccaggtttacctggattt ccaggagcagaaggaccacctgggcctccaggtcaaaagggtgatgacggtgctcctggg ccagtgggcccgaagggaatcagggggccccctggacttcctggattcccagggacacca ggtcttcctggaatgccaggccatgatggagccccaggacctcagggcatcccagggtgc aatgggacaaaaggagaaaggggatttcccggcttttctggtattcccggtttaccaggt cccccgggtcgtcctgggattccaggagtgaagggacagccggggagtataattctgtcc acggcgctgggcccaaagggggacccaggcgatccggggcttccaggaagacaaggtcca gctggtatgaccggaagcccagggcctctcggttcccctggtctgccaggatggatgggg cctcctgggccgccaggaattcaaggaccaaaggggaatatgggcttgaatttccagggt cccaaaggtgaaaagggtgaacaagggctacaaggtccgcctggccccccggggcagatt ggggaaatgaagagacccaatgagacggagctgctgaaaggagatcagggtgctccgggg gaccaaggctcacctggacttcccgggctccaggggcctcctggtcttcctggtggtgtg aaaggtgaaaaaggctggccgggagaaccgggccagaaaggtaagccaggcagagatgga gccagtggcctcccgggcatgcaaggcttgcctggtgatcccggtgttcctggtaaaccc ggaaggggaggcgagaagggtcaaaaaggtgacaccggcccccccggcccgcctggactt gtacttcctcgcggtgggactggtgaaaaagggaacttgggcttgcctggcttgccggga gagaaaggagatcaaggttccccaggggcaccgggtctacccggccttcctgggcctcca gggcctactgtcacgggacctcccggaccccctggctttcctggggaaaggggcgagaag ggagctaaagggctgcccggcgtccccgtacctggccagcccggatgtgacgggcagccc ggggctcctggtctccctgggactccgggcaaaccgggacctcatttccctaatggtgcg gtgtgtgaaaagggagctcggggcccaccaggatctccgggggacagaggagtgccggga gagcaaggagtgaaaggagacaagggggacacctgcctcaactgtatcgaagctggcctc cctggccttccaggggagcctgggctgccaggacctccaggcctcacaggagctcgtggt ttccctgggcagaaaggtgccaaaggaaatgccggtgccattggtccagtaggatcacca ggccttccaggagttccgggtgcctcaggagagcctggttcaaaaggaagtccaggggac accatcagtttcccagaaatgaagggtgacaaaggtgatgcaggtctccctggagcttca gggattcctggtttgcctggcagtcccggaaaagatggattgcccggacttcccggcatc aaaggaaaacctggtggctttgctttgaaaggtgaaaggggtccccctggaaagccaggt ttgccgggtctgcccgggaccagagggcccatgggtcttcctggtttgggcctaccaggc cctatgggtaaaaaaggcatcccaggcatggcaggaaatccgggtcccccaggaatccca ggtgccaaaggtgatcctgggccaactatatcccaaccgggacctcctggcttgcccggc ctgcctggcagagatggtgatgtgggtcttccaggtgatccagggtttccaggtgtgcca ggcttgccgggaatccctggcagtaaaggggaaccaggtcgcccaggcattggtcttccc ggaccaccaggtcccaaaggttaccagggaatgccggggcctccaggaacccccggagca cctggaagacgtggtctacaaggcgctcctgggcatcctggtctcccaggtccaaagggg gagccaggggttggccttcctggaccgcctggacttaagggactcccgggcgttaaagga gcacctggtccaaaaggcagcactggtttcccggggctctcaggcatcccagggctccct ggtttggatggaccggccgggccaaaaggtgacccgggaacaatcggacagcccggattt atgggtccttctgggccaccaggaatgggccgtccaggccatccaggaccaccgggggtt cctggatctcttggtcaaccaggcttgccgggacacccgggaggaaagggagacccagga ccccctggatttgatgtctcggggcctcccggtgagagaggccatccgggcctccctgga atacctggggtcatggggcttcaaggttttccagggtccccaggtcgagatggcgccccc gggctttcaggtgccaaaggtgaaatggggaagctggggcctccaggaccaccgggacct ttaggaattcctggcaggagtggtgttcctggcttgcaaggtgagaacggtttgccgggt cagccaggatttcctggtcctgtaggacaaaaaggtggaaaaggcgagactggcattcca ggccctcctggacaagtggatcccaactatccgaaagtaaagggggagaagggagaccca ggattaccaggcgttcctggaccgttgggtcccaaaggctcccatggtcatcctggagac ccaggacaacctggactggatggacagcctggttccccaggagcaccaggccccaaggga aaccaaggccttcctgggcgaccgggacccgtaggccctcctggattaaaaggctgcata ggagaaatgggatttccaggtctccaaggtgtgcaagggtccccaggggtgcctggagtt gccggccagcctggctccccgggatttcctggacaaaacggagagaaaggagcccctggt attggaggaataggccgcccaggtctcccgggtcctaagggtgatcctggcctgcctggg tacccagggactcctggcagtcaaggtgccctgggagacaccggttcgcctggtgcccca gggagccctggggccaaaggacagccaggcttgcccggacggccaggtattacaggcctt cctggacccagaggtatggatggcccatctggcagccctggtattccaggacaatctggt cctgtaggcagtcagggccatcctggtcccccaggatctccaggagagaaagggaaaccg ggtcaagatgggattcctggaccagctggacagaagggtgaaccaggtcaaccaggattt ggattaccaggacctcccggaatctcaggatttcctggtgagaaaggtgatgaaggttcg ccaggtactccaggaagccctggacctcaaggccccaagggtgaacggggctttcctggc tttcctggtatacaaggacccccaggtcctcctggctctccgggtcaaaatcgagaaggt cccaaagggaaccctgggccccgaggtcatcctgggagagcagggcctaaaggtccccgg ggtgtcgctggaaatggccgagcgaaaggaaagagaggagatccgggcctacctgggaag cccggcttgcctggtctcaaaggagaacgaggtccacctgggccccagggcgatcctggg tggccagggttcattggaatgaaggggaatcctggtatccaaggtatcccgggattccaa gggatgaagggcccccctggtgctcctggttcagccggccctgcaggggctccaggccct agaggcccttcaggttcccctggctttcctggtccctctgagaaggatatcatcatcaaa ggagatattggacctcccggactgccaggcttgccaggattgaaaggtcctgtggggatc ccaggacccccaggcttcccaggcccaactggaccggcgggagaccctggacgtaatgga cgccttggcattaatggcccggtaggccccaaaggagacccaggcccatcaggccaacca ggtaaccgtggagtagatggttctccaggatcagagggcctgccaggtttgccgggtccc cctggaaccctctctcttgcccatggctttctcatcacacggcacagccagaccacacat atcccacaatgccctcaaggaaccgtccagatctacacggggttttctctcctttatgta caaggaaacgagagagcccatggccaagacttggggacatctggcagctgtctgcaccgc ttcagcaccatgcctttcatgttctgtaacatcaacaacgtatgtaactttgcctcaaga agtgactactcctactggctgtccacttccaaaccagtgccgatgaatatggagccactg tcgggacaaagcattgtgccatttatcagtcggtgctcagtgtgtgaagccccggcaatg gtgattgcagttcacagccagaccacccagctcccctattgcccgcaagactgggattct ctctggactggttattcctttatgatgcacacgagtgctggggcagagggcgcgggtcag accctggcctctcctggttcctgtctggaagagttccgtccggcccccttcatcgaatgc cacggacgggggacttgcaactactacgccaactcctacagcttctggctggcgaccgtg gaggcatccgacatgttcagtaagccccaaccggagacactcaaagcaggagacttgagg acacgcataagtcgatgtcaggtttgtatgaaaaggacataa

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