Sarcophilus harrisii (Tasmanian devil): 100931725
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Entry
100931725 CDS
T02286
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100931725
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Perilipin
DMTF1_N
Motif
Other DBs
NCBI-GeneID:
100931725
NCBI-ProteinID:
XP_031803289
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Position
1:complement(630743601..630890585)
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AA seq
729 aa
AA seq
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MTARYSMRETDLLMNSSSGSLNKEDATNNAVTTKSMSEEEKILSKIQEENQKLEKLKASR
EEYLPISLAVFHIQGSSKEDKDYFREKTEKDKDCFTSLCSLISNLQXXVYKNAMDNIRSA
KKTLVPALXLTKASSEHQKNYHKAPFELWIKWSRSQSENEDDDIQLLEIQMLGMSCNIVL
KLKSAFMDLMPKVQGLPTNLQXKIQQACYDMQELHNTFSLSNKFEDLDKYHLTQSQLRFT
QAQGSIEELFYFXENGIPSGWRLGPLSLNISYQGSQGSPGVPGPPGPVGPPGLPGEIGFS
GKPGQPGQPGSPGKDGTNGLPGLQGPKGEPGERGEYGLPGNPGPRGEVGEQGLVGMPGEK
GEMGLPGSPGLQGLRGEKGDEGEKGGLGLPGLKGDRGNKGEAGPPGPPGPPGFPGTISHF
TPHPHMPGEAGQKGEKGDPGINGEPGPRGFPGEVGPKGPPGPPGAQGPEGARGGPGAAGN
TGAPGPIGPPGARGLPGNVGIPGVMGPPGKTGERGEKGEPGEEGKTGPLGPRGDPGPPGE
PGPPGKGKEGEPGRPGVPGLPGPQGHKGDRGAPGLPGQPGSRGGPGIGIAGPPGSTGPPG
EKGPPGSRGLPGFPGPQGPAGQDGLPGNPGERGAPGKPGPSPLLSPEDLNLLVKDVCNDC
PPGPPGLPGLPGLKGDKGLQGKPGRDGADGKKGDAGLKGLPGPPGLTGPKGTKGEPGADG
EIGQKGEQE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaggtattctatgagagaaactgatttgttaatgaattccagtagtggttcc
ttgaacaaggaagatgccacaaacaatgctgttaccacaaaatccatgtctgaagaagag
aaaatcttgtcaaaaatccaagaggaaaaccaaaaactagaaaaattaaaagcgtctagg
gaagaatacctcccaatatcactagccgtatttcatatccaaggatcttcaaaggaagac
aaagattattttagagaaaagactgaaaaagacaaagactgtttcacatcactatgttca
ctgataagcaacctccaatgataggtatataagaatgctatggacaatatcagaagtgcc
aagaaaactcttgtaccagctctgtgacttaccaaagcaagttctgagcatcagaagaat
tatcataaggcaccatttgagctgtggattaagtggagtagaagccagtctgaaaatgaa
gatgatgatattcagctcctggaaatccagatgctgggcatgtcctgtaacatcgtcttg
aaattaaaatcagccttcatggacctgatgcctaaagtccaaggtctcccaaccaactta
caangtaagatccaacaggcttgttatgatatgcaggaacttcataacaccttttcctta
agtaataagtttgaagatctagacaagtatcatctgacccagagccaactgaggtttact
caagcccagggaagtatagaagaattgttttatttctgagaaaatggtattccttctggt
tggcgcttaggaccactatctctcaatatctcttaccagggctctcaaggatctcctggt
gtcccaggaccacctgggccagttggccccccaggcctccctggagagattggcttctct
ggaaaacctggtcaacctggccaaccaggttcccctggtaaagatgggacaaatggactt
cctggattgcaaggacctaagggagagccaggagaaagaggagaatatggtttacctgga
aatcctggacctaggggtgaagttggggagcaaggtctagtgggcatgcctggtgagaag
ggagaaatggggcttccaggatccccaggacttcaaggactaagaggagaaaagggagat
gagggtgaaaaaggtggcctgggactccctggactgaaaggtgatagaggtaacaagggt
gaagctggtcctcctgggccccctggtcctcctggctttcctggaacaatttcacatttc
actccgcatcctcacatgcctggggaagctgggcagaaaggcgagaaaggagatccaggc
atcaatggggaacctggaccacgtggttttccaggtgaagtaggaccaaagggacctcca
ggacccccgggtgctcaaggcccagaaggagcccgagggggacctggagcagctggaaac
actggagctcctggaccaatcggtccccctggtgcccgtggtctcccaggaaatgtggga
atccctggagtcatgggaccaccaggaaaaactggtgagagaggagaaaagggagaacct
ggtgaggaaggaaaaacaggaccacttggtcccagaggtgatcctggccctcctggagaa
cctgggccacctgggaaagggaaggaaggagagccaggacgtcctggtgtgcctggatta
ccggggcctcaaggacacaagggggaccgaggtgctccaggcttgcctggccaacctgga
agtagaggaggcccaggaattggaatagcaggtcctccaggttccactggaccaccagga
gaaaaaggaccaccaggttctcgagggttacccggattcccaggtccacaaggtccagct
ggacaagatggtctacccggaaatccaggagaaagaggtgcaccaggaaaaccaggtccc
tctcctcttctgtctccagaggatctaaatctcttagtgaaggatgtttgcaatgactgt
ccacctggtcctccaggacttcctgggcttccaggattgaagggagataagggccttcag
ggaaaaccaggaagagatggtgcagacgggaaaaagggagatgctggactcaaaggcctc
ccaggacctcctggattaactggaccaaagggcactaaaggagaaccaggagcagatggt
gagattggacaaaaaggtgaacaggaataa
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