Sarcophilus harrisii (Tasmanian devil): 100931760
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Entry
100931760 CDS
T02286
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shr03009
]
100931760 (DDX52)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100931760 (DDX52)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
90S particles
Helicases
100931760 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-GeneID:
100931760
NCBI-ProteinID:
XP_003768044
Ensembl:
ENSSHAG00000013962
UniProt:
G3WLV5
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All DBs
Position
4:complement(354787586..354811472)
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AA seq
618 aa
AA seq
DB search
MDAHDLFRRLGAGAKFDLRRFQTDAARFQLGKRKFDFDSSEVLEELNFFGRKKPTPAENE
ASLDNSLSKEEERLQQKVEGEEDNRIERKRKRNMKKEKQTPETISVGSNKEEETILWMSS
LEAKIKNKKGKEENKLTAEKLERLRKQKINCLRNKHKIHIQGTDLPEPITSFQQLDQEYK
IHSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPT
NKGFRALIISPTRELASQTHRELVRISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVT
TPNRLIYLLKQDPPGIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHKVRRAM
FSATFAHDVEQWCKLNLDNVISISIGARNSAAETVEQELLFVGSETGKLLAMRDLIKKGF
HPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTAL
LARGIDFKGVNLVINYDFPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVI
QQAGCPVPEYIRSFHKLPSKQKKKMIKKPLERKSINTTPKFFLENDESEKKITHQNAGKK
TVPTKTRNNQISKTIPEI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgacctgtttcgtcgcctcggcgccggagccaagttcgacctgaggcgc
ttccagacggacgcggcccgattccagctaggaaaaaggaaatttgactttgattcttca
gaggtattagaggaactgaacttctttggaaggaagaaacctacccctgctgaaaatgaa
gcctcattggataatagcctctccaaggaagaggagagactgcagcaaaaagttgaaggt
gaagaggataacagaattgaaaggaagaggaaacggaacatgaaaaaggaaaaacaaact
cctgaaactatttcagttggttccaacaaggaagaagagactatactatggatgtcttca
ctggaagccaagattaaaaataaaaaaggaaaagaagaaaataaactaactgcagagaaa
ttggaacggctccgaaagcaaaagataaactgcctccgaaataaacacaaaattcacatc
caaggaactgatcttccggaacctattacttcatttcagcaacttgaccaggaatacaag
atccactctcgactactccaaaacatcttagatgcaggtttccagacccccacaccaatc
caaatgcaagcaattcctgtcatgcttcatggtcgtgaactgttggcttctgcccctact
ggatctggaaaaaccttggcttttagcattcctattttaatgcagctgaaacaaccaaca
aataaaggcttcagagcactgatcatatcgcccacacgagaacttgccagccagactcat
cgagagttagtaagaatctctgagggcaccggattcagaatacatatgatacacaaagca
gctgtggcagccaagaagtttgggcctaaatcatctaagaaatttgatattcttgtgact
actccaaatcgactaatttatttgctgaaacaagatcctccaggaatagacctaaaaaat
gtggaatggctggtggtagatgaatctgacaaattgtttgaagatggaaagactggtttc
agagaccagctggctttcattttcctggcttgcacatcccacaaggtcaggagagctatg
ttcagtgcaacgtttgcacatgatgtggaacagtggtgtaaactcaacctggacaacgtt
atttctatttccattggagcaaggaattctgcggcagagactgtggaacaagaactcctg
tttgttggatctgagacaggcaaacttctagctatgagagacctaattaagaagggtttc
cacccacctgtccttgtttttgttcagtccattgaaagagctaaagaacttttccacgaa
ctcatttatgaaggtattaatgtggatgtaattcatgcagagagaacccagcagcagaga
gataacacagtccatagtttcagagcaggaaaaatctgggtcctcatctgtacagccttg
ttagcaagaggaattgattttaaaggtgtgaacttagtaatcaactacgactttccaacc
agtgcagtggaatacatccataggataggtcgaactggaagagcaggacataaagggaag
gctgttacattctttactgaggatgataagccattattacgaagtgttgccaatgtgata
cagcaagcaggatgccctgtgccagagtacatcagaagtttccacaagcttccaagcaaa
cagaaaaagaagatgattaagaaaccattggaaagaaaaagcattaatacaacaccaaag
ttttttttagaaaatgatgaaagtgaaaaaaaaattactcatcagaatgctggaaagaag
acagtacctactaaaaccagaaataatcagatttcaaaaactattccagaaatataa
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