Sarcophilus harrisii (Tasmanian devil): 100931855
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Entry
100931855 CDS
T02286
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100931855 (PTBP2)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100931855 (PTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100931855
NCBI-ProteinID:
XP_031822979
Ensembl:
ENSSHAG00000016208
LinkDB
All DBs
Position
4:396653294..396762286
Genome browser
AA seq
537 aa
AA seq
DB search
MDGIVTDVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDSKKFKGEDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcactgatgttgcagttggagtgaagagaggatctgacgaacttctt
tcaggcagtgtactcagtagcccaaactctaatatgagcagcatggtagttactgccaat
ggtaatgacagcaagaaattcaaaggagaagataaaatggatggggccccttcccgtgta
cttcacattcgaaaattacctggtgaagtgacagaaacagaagtcattgcattgggttta
ccttttggtaaggtaaccaacatcctaatgctgaaaggaaaaaatcaggcatttttggaa
ctagctacagaagaagcagctattactatggttaattactattctgctgtgacacctcat
cttcgaaaccaacccatatatatccagtactccaatcataaagaattaaagacagataac
acattaaatcagcgtgctcaggcagttcttcaggctgtgacagctgtacagacagcaaat
acccctcttagtggcactacagttagtgagagtgcagtaactccagcccagagtccagta
cttagaataattattgacaatatgtactatcctgtaactcttgatgttcttcatcagata
ttttccaagtttggtgctgtattgaagataatcacatttactaaaaataatcagttccaa
gctttgctgcaatatggtgatccagtaaatgcacaacaagcaaaattagctttggatggt
cagaatatttataatgcatgctgtactctaaggattgatttttccaaactggtaaatttg
aatgtaaaatacaacaatgataaaagtagagactatactcgacctgatcttccttctggt
gatgggcaaccagctttggacccagctattgctgcagcatttgctaaggagacatctctt
ctagggcttcctgttgcagctgttccaggagctctgagtcctttggctattccaaatgct
gctgcagcagctgctgcagctgctgctggccgagtgggtatgcctggagtctcagctggt
ggcaacacagtcctgttggttagcaatttaaatgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggggatgtgcaacgtgtgaagattttatacaataagaaa
gacagtgcacttatacagatggctgatggaaaccaatcacaacttgcaatgaatcatctg
aatggacaaaaaatgtatggaaagattattcgggttaccctctccaagcatcagactgta
caactacctcgagagggacttgatgaccaaggcctaactaaagattttggtaattcccca
ttacatcgctttaagaagcctggctctaaaaattttcagaatatttttcctccatcagcc
actctccacctttcgaatattcctccatcagtagcagaagaagatctacgtacacttttt
gctaacactgggggcactgtgaaagcatttaaattttttcaaagagatcacaagatggcg
cttcttcaaatggcaacagtggaggaggctatccaggcactgattgaccttcataattat
aaccttggagaaaatcaccatctgagagtttctttctccaaatcaacaatttag
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