Sarcophilus harrisii (Tasmanian devil): 100932044
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Entry
100932044 CDS
T02286
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100932044 (SORCS1)
Membrane trafficking [BR:
shr04131
]
Protein recycling
Others
Others
100932044 (SORCS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100932044
NCBI-ProteinID:
XP_031811670
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Position
2:complement(563441606..564145678)
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AA seq
1214 aa
AA seq
DB search
MGKVGGGGGGGSPARLGALLARTGILLLCARGAWGGGGSCCPPASPGSAQRWTPARAGTP
LPGPQEKPEPAAVPGEQRHFGAPAKPSRAPTAPMPFPRRPVFTVAPGDRALSLQRGPEGK
SGAGRPRSIRRRRSGVEQEKQDRDNGEGRRPRGHPGDGGHREPGKATRFRLEELRLTSTT
FALTGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKV
GLKSILSYLYVCPTNKRKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQE
DWILAYSQDQKLYSSAEFGRRWQLLQEGVVPNRFYWSVMRSNREPDLVHLEARTVDGHSQ
YLTCRMHNCTESNRNKPFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNAFAQMKL
PKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGN
IMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDTDLRGDPVHCLLPYCS
LHLHLKVSDNPYTSGNIASRDTAPSIIVASGNIGSELSENDISMFVSSDAGNTWRQIFEE
EHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETL
IMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSE
KKCMQGKYAGAMASEPCVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSLGQSYL
NSTGYRKVVSNNCTDGVREQYTAKPQQCPGKAPRGLRIITSDGKLTAEQGHNVTLMVQLE
EGDLQRTLIQVDFGDGIAVSYVNLSSTEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYL
HVTCPLEHVHLSLPFVTTKNKEVNATAVLWPSQVGTLTYVWWHGNNTEPLITLEGSKSFK
FTSEGMNTITVQVSAGSAILQDTKTIAVYEEFQSLRLSFSPNLDDYNPDIPEWRRDISRV
IKRALIEATGVSSQHILVAVLPGLPTAAELFVLPYQDATGENKRSSEDLEQISELMIHKL
NQNSIHFELKPGIRVLVHAAHLTAAPLVDLTPSHSGSAMLMLLSVVFVGLAVFVIYKFKR
KIPGLNVYAQMQNEKEQELISPVSHNENRPNITQAELRSPDQFVDEKLDPQPIGSISIVA
ENQSTKEIPTYVNV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggcggcggcggcggcggcggctccccagcccggctcggagcgcttctc
gcccgtaccgggatcttgcttctctgcgcccggggcgcctggggtgggggcggctcctgt
tgccccccagcatctcctggatcggcccagcgctggacaccagcccgagccgggacaccc
ctgccggggccccaagagaagccggagccggcggctgttcctggggagcagcggcacttc
ggggctcctgccaagccgagtagagcgcccacggctcccatgccattcccccgccgcccg
gtgtttacagtggcccccggggacagggctctttccctccagaggggcccagaaggcaag
agtggagccggaagacctcgctccatccggaggagacggagtggggtggaacaagagaag
caagatcgggacaacggcgagggcaggcgcccacggggacacccgggagacggagggcac
cgggagcctggcaaagccacccggttccggctggaggagctgagactgacgagtaccacg
ttcgcactgaccggggactcggcacacaaccaagccatggtccactggtcaggtcacaac
agcagtgtgattctaattttgacgaagctgtatgactataacctagggagcatcacagag
agctcactttggaggtcaacagattatgggacaacctatgagaagctgaatgataaagtt
ggtctgaagtcaattttgagctatctctatgtctgccctaccaataagcgcaagatcatg
ttacttacagacccggagattgaaagcagtttattgatcagttctgatgaaggggcaacc
tatcaaaagtatcggctgaatttttatatccaaagcctacttttccatcccaagcaagag
gattggatcctggcatatagtcaagaccaaaagttatatagttctgcggaatttgggagg
agatggcaacttctccaggaaggagtcgtcccaaacagattctactggtcagtgatgagg
tcaaacagggagccagaccttgtgcatctggaggccaggactgtggatggtcattcacag
tacttaacctgccggatgcacaactgcactgaaagcaacagaaataaacctttccctggc
tacattgaccccgattctctgattgttcaggatgattatgtttttgttcagttgacttca
ggaggaagaccacattactacgtatcttaccgtaggaatgcttttgcacagatgaagctc
cccaaatatgccctgcctaaggatatgcatgtcatcagcacagatgagaatcaagtattt
gcagcagtccaggagtggaaccaaaatgacacctacaacctctacatctcagacacacgt
ggtgtctacttcactttagctttggagaatgtccagagtagccgagggcctgagggtaac
atcatgattgacctctatgaggtagcagggataaagggaatgttcttggctaacaagaag
attgacaaccaagtgaagactttcatcacatacaacaaaggtagagactggcggttgcta
caggctcctgacactgatctaagaggggaccctgtacattgcctgctgccatattgttcc
ctgcatcttcacttaaaagtctcagacaacccatatacttctggaaatattgccagccgt
gacacagctccaagtatcatagtggcttctggtaacattggatctgaactgtctgagaat
gatatcagtatgtttgtgtcttcagatgctgggaacacatggagacagatctttgaagaa
gagcatagtgttctgtacctggatcaaggtggggttttggttgctatgaaacacacatct
ctgccgatccgacatctctggctaagttttgatgaaggtagatcatggagtaaatacagt
ttcacttccatccctctttttgtggatggagttctgggtgagcctggggaagagaccctg
attatgacagtgtttggacacttcagtcatcgttctgaatggcagctggtcaaagtagac
tacaagtctatatttgatagacggtgtgctgaggaagactacagaccatggcaacttcac
agccagggagaagcatgcattatgggagctaagaggatatataaaaagcgtaaatcagag
aagaaatgcatgcagggaaaatatgcgggagcaatggcttctgaaccatgtgtctgtaca
gaggctgattttgactgtgactacggttatgagcgacacagcaatggtcagtgcctgcca
gcattttggttcaatccttcctccctctccaaggattgcagcctgggacagagttacctc
aacagtacagggtaccgaaaggtggtttccaacaactgtacagatggagtgagggagcaa
tatactgccaaacctcagcaatgtcctggcaaggctccccgaggcctccgtattatcact
tctgatgggaaattgactgcagaacaaggacacaatgtcactctcatggtacaactggaa
gagggtgacctacaaaggacactcatccaggtggattttggtgatggcattgcagtgtct
tatgtcaacctcagctccaccgaggatgggatcaaacatgtctaccagaatgtgggcatt
tttcgagtgactgtgcaggtggacaacagtctggggtctgacagcgccgtcctgtactta
catgtaacttgtcccttggaacatgtgcatttatcacttccctttgtcaccaccaagaac
aaagaggtcaatgcaacagctgtgctgtggcccagccaagtggggaccctgacttacgtg
tggtggcacgggaacaacacagagccactgatcaccctggagggaagcaaatcatttaag
tttacttcagaaggaatgaacaccataacagtacaggtttcagctgggagtgctattctt
caggatacaaaaaccattgcagtatatgaggaattccagtctcttcgcttgtccttttct
ccaaacttggacgactataatccagacattccagagtggaggcgtgatatcagccgggtc
atcaaaagagccctaattgaagccacaggtgtttcaagccaacacatattggtggcagtg
cttccaggcttacccacagctgctgaactctttgtcttgccttatcaggatgctacagga
gaaaacaaaagatcatccgaagacctggaacagatatcagaactgatgattcacaaactg
aaccaaaactccatccactttgagctaaaacctggaatacgtgttcttgttcatgctgcc
catttaacagcagcccccctcgtggacctcaccccaagtcacagtggatcagcaatgctg
atgctactctctgtggtatttgttggactggccgtgtttgttatttacaagtttaaaagg
aagatcccgggccttaatgtttatgcccagatgcagaatgagaaagagcaagagctgatc
agcccagtcagtcacaatgaaaacaggcccaatatcactcaggctgagctgaggagccct
gaccaatttgtagatgagaagttggacccacagcccataggaagtatttccatagttgct
gagaatcaaagcacaaaagaaatccctacctatgtaaatgtttga
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