Sarcophilus harrisii (Tasmanian devil): 100932130
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Entry
100932130 CDS
T02286
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100932130 (CAPRIN2)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100932130 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
100932130
NCBI-ProteinID:
XP_031793976
Ensembl:
ENSSHAG00000004287
LinkDB
All DBs
Position
5:complement(98638950..98748145)
Genome browser
AA seq
1042 aa
AA seq
DB search
MVLLSSFSLCSHLPSGHSEESKVGNMKSAKQQINHSQCGESLTPLSPLRSALNSVVTSSQ
AYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEPLNSDQLEAVEKYEEVLHNLEF
AKELQKTFSGLSHDLLKAQKKAQRREHMIKLEAEKKKLRTIFQVQYVLQNFTQEHVLEDF
KGGLNGAMYLPSRELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGT
TYKHMKDLLSKLLTSGYFESIPVPRNIIKQKKELNEEIRGKSEKKQLSQTESAKESEPLM
EHTQPEIQPQEFLNRHYLSEVEYSSKKPEGQLSWEEDYTRKPNLTKCWEGQKKLESLVSW
DSVKQQETVKPILTPEEDNQESPKSTTVDLEQKKQEISKSNIVRGTWEQDIPKSNLVCGQ
EEQKKQESLKPWVAPPQKELEPKKQTTKSWTPPAQEIGSWPTSINEEQDKKSSEIPEPWE
DNVESQKQTLLQKLQSPSKSWGPPATNTAANGQLMTRKYDSESKDVPKLLNPSKDTPFAP
PNDSILRKEKLQDLMTQIQGTYNFMQESVLDFDKPSSALPSPQLPSVIPDSPEASIEQKL
SNQNDFLQEPLQAATSFVKNNTNSLVIADQASSGSEMELETHQAAIPLSKPQTSITSTDP
PVSQASQDQVFQSPPASSSTVFDVNAPLPPRKEQEIKDSPYSSRYNQSYTTASTQTAPQC
QLPSTHVEQTTLSQDQTANNQPDGSIQVSSGSLAFYPAQTNVFPRSTQPYLSNRSSIRGC
ARSGRSLTNSFRSPGGYKGFDTYRGSPIIANGSYSQLQFQAREYPGTPYSQKDTNFQSCY
KRGGLSGGSCTSSRGWSDSSQVNSPERENETFNSVDSGQGDSRSMTPVDVPVTSPAATIL
PVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTY
VFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLH
RGAIYGSSWKYSTFSGYLLYQD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctttcttcgttctctttatgtagccacttaccttcaggccattcagaggag
agcaaagtggggaatatgaaatcagccaagcagcaaataaatcacagccaatgtggggag
agcctgactcccctaagtcccctgcggtctgctctgaattcagtggtaacttcttcccag
gcctatgagacctacattgataatggactcatatgtctcaaacacaagattaggaatatt
gaaaaaaagaagctcaaattagaagattataaggatcgcttgaaaaatggagagccactc
aattcagatcagttggaagcagtagaaaagtatgaagaagtattacataacttggaattt
gccaaggagcttcaaaaaactttttctggactcagccatgatctcctgaaagcccagaag
aaggctcagagaagagagcacatgataaaacttgaggctgagaaaaagaagctccggact
atatttcaagttcagtatgtcttgcagaactttacacaagaacatgtactagaggacttc
aaaggtggcttgaatggtgcaatgtatttgccttcaagagaactagactacctcattaag
ttttcaaagctcacatgccctgagagaaacgagagtctgagtgttgaagaccaaatggaa
cagtcatcactctacttctgggacctcttagaaggtagtgagaaagcagtagtaggaaca
acatacaaacatatgaaggatctgttgtctaaactgctgacctctggctattttgaaagt
attccagttccccgaaatattataaaacaaaaaaaagaattgaatgaagaaatccgagga
aaatcagagaagaaacagttatcacagacagaatctgctaaagaatcagaacctcttatg
gaacatacacagcccgagatacagccacaagagtttctcaacagacactatctgtctgaa
gttgagtattcaagcaagaaaccagaaggtcagctgtcttgggaagaagattatactagg
aaaccaaatcttacaaaatgttgggaaggccagaagaagctagagtctctggtgtcttgg
gattctgttaagcaacaggagactgtaaaacctattttaactccagaagaagataatcaa
gagagcccaaaatccactactgttgatcttgaacagaagaagcaagaaatttctaaatcc
aacatagttcgtgggacatgggagcaagacatacccaaatctaatttagtctgtggtcag
gaggaacagaagaaacaagagtccctaaagccttgggttgctcctccgcaaaaagaattg
gagccaaagaaacagactaccaaatcttggactcctcctgcccaggagattgggtcttgg
ccaacttcgattaatgaagaacaagataaaaagtcatctgaaattccagagccctgggaa
gacaatgttgagagtcagaaacagactttgctgcaaaagttacaatctccttctaagtcc
tggggacctccagcaacaaatactgcagcaaatgggcagttgatgaccaggaagtatgat
tcagaatccaaagatgtgcctaagcttttgaatccctccaaagataccccttttgcccct
ccaaatgattcaattctaaggaaagaaaagcttcaggatctgatgactcagattcaggga
acttataattttatgcaggaatcagttttggattttgacaagccttcaagtgcacttcct
tcaccacaactgccttcagttattccagatagtcctgaagcttctatagaacagaaacta
tccaatcaaaatgactttcttcaagagccattacaagctgctacttcttttgttaagaat
aataccaattctttagtgattgctgatcaagcttcttctggatctgaaatggagctagag
actcatcaggcagcaattcctctaagtaaaccgcaaacttcaataacttctacagatcct
cctgtgtcacaagcttcccaggatcaggtcttccagtcacctccagcaagcagcagtacg
gtattcgatgtgaatgcacctttgcctccacggaaagaacaagagataaaagactctcct
tattcaagtagatataatcagagttatactacagcaagtacacagacagcaccccagtgc
caattgccatctacacatgtggaacaaactactctctctcaagatcagactgcaaacaat
caacctgatggatcaattcaagtaagcagtggtagccttgccttttatcctgcacagact
aatgtgttccccagatccacccaaccatatcttagtaaccgaagttccattagaggatgt
gctcgtagtgggagatcactgacaaattcctttcgctcccctggtgggtataaaggtttt
gatacttacagaggatcccctatcattgccaatggcagttatagtcagctgcagttccaa
gctagagaatatcctggaacaccatattcccaaaaggatactaattttcagtcatgttat
aaacgaggaggactctctggtggttcttgtacaagttcgagagggtggagtgattcttct
caggtgaacagtccagaacgagaaaatgaaaccttcaacagtgttgactctggacaagga
gactctcggagtatgacccctgtggatgtgccagtgacaagtccagcagccaccatattg
ccagtacacgtatatcctctcccccagcagatgagagttgccttttcagcagccagaacc
tctaatttggctcctggaactttggaccagcctattgtgtttgatcttcttctgaacaac
ttgggagaaacttttgaccttcagcttggtagatttaattgtccagtgaatggtacttac
gtttttatctttcacatgttaaagctggcagtgaatgttccactatatgtcaatctgatg
aagaatgaagaagttttagtatcagcttatgctaacgatggtgctccagatcacgaaact
gctagtaatcatgcaattcttcaactatttcagggagaccagatatggttacgtttgcat
aggggagcaatttatggaagcagttggaagtattctactttttcaggatatctcctttat
caggactga
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integrated database retrieval system