Sarcophilus harrisii (Tasmanian devil): 100932132
Help
Entry
100932132 CDS
T02286
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X2
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100932132 (VPS52)
Membrane trafficking [BR:
shr04131
]
Protein recycling
Others
EARP complex
100932132 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
100932132 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Dor1
Sec3_C-term
Rubis-subs-bind
COG6_N
CoV_NSP7
ATG16
Motif
Other DBs
NCBI-GeneID:
100932132
NCBI-ProteinID:
XP_012407454
Ensembl:
ENSSHAG00000008320
LinkDB
All DBs
Position
6:complement(129583748..129592156)
Genome browser
AA seq
715 aa
AA seq
DB search
MAAPQLILPVGASDADEDENALGGGPGLQEPLQLGELDITSDEFILDEVDVHIQANLEDD
LVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACDAVLERMEQ
MLGAFQSDLSSISSEIRTLQEQSGAMNVRLRNRQAVRGRLGELVDGLVVPSVLVTAILEA
PVTDPRFLEQLQELDAKAAAVREQEARGTAACADVKGVLDRLRVKAVAKIREFVLQKIYS
FRKPMTNYQIPQTALLKYRFFYQFLLGNERATAREIRDEYVETLGKVYLSYSRSYLGRLM
KVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPVELEAPILVPHT
AQRGEQRYPFEALFRSQHYALLDNSCREYLFICDFFAVSGPAAHDLFHAVMGRTLNMTLK
HLESYLADCYDAIAVFLCIHIILRFRNIAAKRDVPALDRYWEQVLALLWPRFELILEMNV
QSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVL
RVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEFIEELLSPP
FGGLVAFVKEAESLIERGQAEKLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFR
NGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccgcagctgattctgcccgtgggtgcttctgacgcggacgaagatgagaac
gccctgggaggcggccccgggctccaggagcccctgcagctgggagagctggatatcacg
tctgatgaattcatcctcgatgaagtggatgttcacattcaggcaaatctagaagatgat
ttggtaaaggaagctctcaaaacgggtgtcgatctccgtcattattcaaaacaggtggaa
ctggagctccagcagatagagcagaaatctatccgagattatatccaggaaagtgagaac
attgcatcactgcacaaccagattacagcctgtgatgcggtcctggagcgtatggaacag
atgctaggtgctttccagagtgacctcagctccattagctctgagatccggacactacag
gaacaatctggagccatgaatgttcggctccgtaaccgccaggctgtgcgtgggagactt
ggggagcttgtggatggtttggttgtaccctctgtcctggtcacggcaatcttggaggca
ccagtgacagatcctcggttcctggaacagctacaagagcttgatgccaaggcagctgct
gtcagggagcaggaagctcgtgggacagcagcttgtgcagatgtcaagggtgtcctggat
cggcttagggtcaaggctgtggccaagatccgagagttcgtcctgcagaagatttattca
tttagaaaaccgatgactaattatcagatcccacagactgcattgctcaaatacaggttt
ttctatcagtttttgctgggaaatgaacgagcaacagcaagagagatcagggacgaatac
gtggaaacgctgggcaaggtttatctgtcctactcacgctcctatctggggaggcttatg
aaggttcagtatgaggaggtggctgagaaagatgatctgatgggtgtagaagatacagcg
aaaaaaggatttttctcaaagccatctctccgaagtagaaatacaatcttcactttgggg
acccggggctccgtcatctctcctgttgagcttgaggctcccatcctggtaccccataca
gctcaacggggggagcaaaggtatccctttgaagcgctcttccggagccagcactatgcc
cttttagacaattcttgtcgtgagtacctcttcatctgtgatttctttgctgtctctggc
cctgcagctcatgatcttttccatgctgtgatggggcgtactctcaacatgactctgaaa
cacctggaatcttatttggctgattgctatgatgccattgctgtttttctatgtatccat
atcattctccgatttcgcaacattgctgctaagagggatgtccctgcactggacaggtat
tgggaacaggtcctggctctactgtggcctcgatttgagctgattctggaaatgaatgta
caaagtgttcgaagcactgacccccagcgactcggagggctggacacacggcctcattat
atcacccgtcgttatgcagagttctcttcagctcttgtcagcatcaaccagacaattccc
aatgaacgcaccatgcagctattaggacaactacaggttgaggtggagaactttgtgctc
cgagtggcagctgagttttcctcacggaaggagcaacttgtgtttttgattaacaactat
gacatgatgctaggcgtgctcatggaacgtgcagcagatgacagcaaagaagttgagagt
ttccagcagctgcttaatgcccgaacacaggaattcatcgaagagcttctgtccccacct
tttggaggcctagtagcgtttgtgaaggaggccgaaagtctaattgagcgagggcaggca
gagaagcttcgaggtgaagaagctcgggtgactcaattgatccgtggctttggcagttct
tggaaatcttcagttgagtcactaagtcaggatgtcatgagaagcttcactaacttccga
aatgggaccagcatcatccagggagcattgacccagctgatccagctttatcaccgcttc
catcgagtcttatcccaaccccaactccgagccctcccagcccgtgcagagctcatcaat
attcaccaccttatggttgagcttaagaagcataaacccaacttttga
DBGET
integrated database retrieval system
