Sarcophilus harrisii (Tasmanian devil): 100932146
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Entry
100932146 CDS
T02286
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X4
KO
K15194
AF4/FMR2 family member 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100932146 (AFF2)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100932146 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
100932146
NCBI-ProteinID:
XP_023362742
Ensembl:
ENSSHAG00000009556
LinkDB
All DBs
Position
X:49556044..50115139
Genome browser
AA seq
1294 aa
AA seq
DB search
MSADCSEEGRQFPFLHLLHYSFGGDLLVDLAKISQDLEGLPGCSTAYPGHLNFPKMFELL
NTANEMDDSHYEQDRNALKRKEWERRTQEVQQDEDLFASGFSLFGEPYKTNKGDALASRV
QNTLGNYDEMKDLLTNHSNQSQLVGIPKNSVPQTPTEKNESSFFPEQRNRMIVPHQSCSN
STASVPPPTSVTPSSSVLHSHQTIKKARGDWQRAGHSSTITQANQSTGQPSRMKNGSSHD
QPQGRYEDLFNCPTEQSKNGGMEDTSMVPVSHARRLSHSKSNGGEASYKESIQCPSPIDF
EFLANGPISPLPSTSLLSAASSLAIQNFPQGLYCKTSVVQQKPTAYVRPMDGQEQLSDFS
PTMKPLLEIENGFSSQTFGTVLEGKPSAATSKTKLTKLTIPQPSEINLSNDPSCVEDILR
DLQLSTSGYSAQKWSDQDIKAPTKLPISQKSMLEDDLKISSDEDENEQDVEKAKATDIPS
NPTLPPVPEPPVIASSGGSGSSSESDSSSESDSDSESSSSDSEGNEESRSNTPQPDPPST
NKWQLDKWLNKVNPHNKTIISNQNETSSENNTLLSITPQTEAQNKGKVNPGLFQIEPKER
PLLSPLREKARQRLLQKPPPPLEAKNSKQKSPAPNEAAPQKIMGKKQPQKVERTPSTEEY
PWPRPNIHPSNTPKDKDTPEHGEQAKARNRAAVGKLAPRKEPKLTAAFIAEKKKLRGPGK
IVPKSREFVETDSSTSDSNTDQEEALQVKSGPPCPTPISAPKPKETPGNGIVSVSTLSGS
SSNSSICTDVAAAEVEEQLFSPLPIVQTELLSPIRDNDDANSLWVKIDLGLLSRVPSREP
AETTSTKTDARENNAKQPQPQPAQPPQSRESPGPSFAEKVPAKNKRKYKSADHLDPFTDN
KKQRLDDIPPSCLLPPCISPIPNSNRFPSTKENNPAKKVTKKRDDKLFPPPLSPLSDEPL
QRRASSDSNNSSSQEVPMPTAFPAASCSFSRPRKNETKTNLNFRICGEDNYSRGPSVGLL
DSNQLEMATWSSMSSLTNGSSESRRPRIHFDDMPHNADYYMQEAKKLKHKADALAEKFGK
AVYYTDAALSFIECGNAMERDPLEAKSPYTMYSETVELIRYALRLKNFTCSSATEWDKRL
AILCYRCLSLLYLRMFKLKRDHAMKYSRSLMEYFKTSSKAAQIPSPWGSCGKSTDAPSPL
SLSPSSSSALPSLGPIVIPHRIHHMAASHVNITNNVLRGYEHWDMADRLTRENREFFADL
DSLMGPLTQHSTMTNLVRYIRQGLYWLRLEASLS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagactgctcagaggaaggaaggcagtttcctttcctccatctactccactat
agctttggaggagatctcttagtagacctggctaaaatctctcaggatttggaaggtttg
cctggctgttccacagcctacccaggacacttgaattttccgaagatgtttgagttgctg
aacacagctaatgagatggatgacagccactatgaacaggatcggaatgcacttaaaaga
aaagaatgggaacggagaactcaagaagtccagcaagatgaagatctctttgcatcaggt
ttcagtctttttggggaaccctacaagacaaacaaaggtgatgcacttgccagccgcgtc
cagaacacactgggaaactatgatgaaatgaaggacttattaaccaatcattccaatcag
agccaactagtgggaatccccaagaattctgtaccccagactcccactgaaaaaaatgaa
tcaagtttttttcctgaacaaaggaaccggatgatcgtacctcatcagagctgtagcaat
tcaacagcatcagtgcctcccccgacttcagtgactccgagttcaagtgtattacacagt
catcagaccatcaaaaaagcaagaggtgattggcaacgagctggtcacagctccaccatt
actcaggcaaaccagtccactgggcagcctagtcggatgaaaaatggctcttcccatgat
cagcctcaaggcagatatgaagacctgttcaactgtccaacggaacagtccaaaaatgga
ggaatggaggataccagcatggtaccagtatctcatgcaagaagacttagccattcaaag
tccaatggtggagaggcttcttataaagagagcattcaatgcccatccccaatagatttt
gaatttttagcaaatgggcctatttctccgctcccttccacatctttactctctgcagcc
agtagtcttgcgattcaaaatttcccacaaggcctttactgcaaaacgagtgtggttcag
cagaagcctaccgcgtatgtgaggcccatggatggtcaggagcaactatcagacttctcc
ccaacaatgaagccgttgctcgaaattgagaatggattttcaagtcaaacatttgggaca
gtgctggagggaaaacctagtgcagccacttcaaagactaaactcacaaagctcaccatc
cctcagccaagtgaaatcaatctttctaatgatcccagctgtgtggaagacattttaagg
gatctacaactttcgacctcaggatacagtgcacaaaagtggagtgaccaagacatcaaa
gcaccaaccaaactacctatatcacaaaaatcaatgcttgaagacgatctgaaaatcagc
agtgatgaggatgaaaatgaacaggacgtggaaaaggcaaaagccacggacattccttca
aatccaacgctgccgcctgtcccggagcccccggtcatcgcctccagcgggggttctgga
agctccagtgaatcggacagcagttcggagtctgattctgacagcgagagctcctcaagt
gacagcgagggcaacgaggagtcccgcagcaatactcctcagccagatccaccttcgacc
aacaaatggcagctggacaaatggctcaacaaagtgaacccgcataacaaaacaattata
agcaaccaaaatgagacatccagtgagaataatactctactttccatcaccccacaaacc
gaagcacagaataaaggaaaagtcaatcctggcctgtttcagatcgaacccaaagagagg
cctctgctgagccctctcagagagaaagcacgtcaacggctcctccagaaaccaccacct
cctctagaggccaaaaactccaagcagaagtcacccgctccaaatgaagcagcccctcag
aagatcatgggcaaaaagcaaccccaaaaggtcgaaaggacacccagcaccgaagagtac
ccctggcctagaccaaatattcatcccagcaacactcccaaagacaaagacacgccggaa
cacggagagcaggccaaagcacgcaacagagcagcagttggaaaactggccccaaggaaa
gaacccaaacttacggcagcgtttattgccgaaaaaaagaagttgagaggccctggaaaa
atcgttcccaagtctcgagaatttgttgaaaccgattcctcaacttcagactccaacacg
gaccaagaagaagccttacaggttaaatcggggcctccctgtcccactccgatcagcgcc
cccaaaccgaaggagactccgggcaacggcattgtcagcgtcagcactttaagcggaagc
agcagtaacagcagcatctgcacggatgtcgctgccgctgaagtggaggagcagcttttt
tcacctctgcccattgtgcaaactgaacttttgtccccaatacgcgataatgacgatgct
aattcactttgggtcaaaatagatcttggcttactgtctcgagtacctagccgagagcca
gctgaaaccacttccaccaagaccgatgccagagaaaataatgcaaaacagccacagcca
cagccggcacagcccccacagtcccgagagtcacctggtccttcatttgctgaaaaggtg
ccggccaagaacaagaggaagtacaagtcagctgatcatctggacccgttcactgacaac
aagaagcagcgactagatgatatcccaccatcctgtctgcttccaccttgcatttcacca
atacccaatagtaacagattccccagcactaaagaaaacaatccagccaaaaaagtgacc
aagaagagagatgacaagctattcccacctccactgtcccccttgtcggatgaaccctta
cagcgacgtgccagttctgacagcaacaattcctccagtcaggaagttcccatgcctact
gcttttccggccgccagctgttctttttccagacccagaaagaatgagaccaagaccaat
ttaaacttcagaatttgtggtgaagacaactacagtcggggtcccagcgtcgggcttctg
gatagtaatcaattggagatggctacttggtcttcgatgtcctccctcaccaatgggagc
tcagagtccagaagacctcggattcattttgatgacatgcctcacaatgccgactattac
atgcaggaggccaagaagctgaagcacaaagccgatgcactggcagagaagtttggcaaa
gccgtatattataccgatgcggccctttccttcatcgagtgcggcaatgcaatggagcgg
gacccattggaagcgaaatctccatacaccatgtactctgaaactgtggagctcatcagg
tacgctctgagactcaagaacttcacgtgctcttctgccacagaatgggacaagagactt
gcaattttatgttaccgatgcctatcactcctgtacttgagaatgtttaaactaaagagg
gaccatgctatgaagtattccagatctctgatggaatattttaagacttcttccaaggct
gcccagataccatctccatggggaagctgtggaaagagcacagacgcaccatcccctttg
tctctcagcccttcatcatcaagtgctttaccatccctgggacctattgtcattcctcat
cgaatccaccacatggcagccagccacgtcaacatcactaacaacgtgcttcgtggctac
gaacactgggacatggctgacagactgaccagagagaacagagaattctttgcagattta
gattcactgatggggcctttgactcaacacagcacaatgaccaacctggttcgttacatc
cgccaaggactgtactggcttcgcctagaggccagcctgtcctaa
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