Sarcophilus harrisii (Tasmanian devil): 100932155
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Entry
100932155 CDS
T02286
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X12
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100932155 (CHD9)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100932155 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100932155
NCBI-ProteinID:
XP_012409274
Ensembl:
ENSSHAG00000002719
LinkDB
All DBs
Position
2:469862726..470112952
Genome browser
AA seq
2373 aa
AA seq
DB search
MSPENFPSVSAEGKEEKKGRRMKSKPKDKESKKTKTCSSTKLKEKTKIGKLIITLGKKQK
RKNVSSDEMSDAEQIPQRPFKDADSQLLIQWRVVAQGSWAAARVEKRRSNRQVKRKKYAE
DAEGKQSEEEAKVSVKIRKSSASLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISS
GMMIDAEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEP
FNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL
QASRPDSRHLDRPLPNTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEM
GLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSLVSRQM
IQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNC
KLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTFMQEFGDLKTEEQV
QKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQ
ANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPDFHLQAMIQSAGKLVLI
DKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP
DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLI
TRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDE
EDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWA
KKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRS
NGYGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRALLAYCLVHYRGDE
KIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSTFDIHKAEWLRKYNP
EHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGVEASDIDVWVPEPDH
SEVPAAWWDLDADKSLLIGVFKHGYEKYNTIRADPALCFLDRVGKPDEKAVAAEQRANDY
MDGDVEDPEYKPAPALFKDDLEDDISSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRR
LITAYQRTSKNRQAQQIQPAFSVQANVMQPLYEETALNPKIAAKIEKQQRWTRREEADFY
RVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELV
DPSIFIQPITEERASRTLYRIELLRKVREQALRHPQLFDRLKLCQPNPDLPVWWECGTHD
RDLLIGAAKHGVSRTDYHILRDPELSFMAAQRSYSQNKGTHSRTSAPLIQQYQMALSTSP
LASQPRLLDTKGNALEDTKVKNESLKEEPQSSEEESISSDEIRTGIKSEPLSPKNGVLPQ
TTGEQKPTGKTETDRRMVAARTEPLTPNPASKKQRMPKRGSESSSDSDSDSDRSSCSSRS
SSSSSSSSSSCSHSRSGSSSSSSSSCSSATSSSSSSSSSSSSSSSSSEESDSEEEAQKRA
EGTTHMKSYDEESVASLSTIQDETQDSFQMNNGTPNSAYILQGGYMLAASYWPKDRVMIN
RLDSICQTVLKGKWPSVRRGYEGSAVASFYTTKLLDSPGAAADAGEPHVTTPPSVGAREE
HDQSTQMSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFESEDGSLGQQQYLARL
RELQNASETSLVNFPKSMPVSDTSSQPAVGANGVILDNQPIVKKRRGRRKNVEDVDILLL
NRNKPPNHVTVGITTSQITPGINPALSYTQSQGLLDIENPVPVINLKDGTRLAGDDAPKR
KDLEKWLTEHPGYVEDLGAFIPRMQLHEGGRPKQKRHRCRNPNKLDINSLTGEERVQLIN
RRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMHDRILTGPVVRE
EVSRRGRRPKSEIAKATAAAAAATAANVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSL
QVTAGLMGMPASLSGGEVNKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPTESVAEEKKGN
DSKEPDGRKERTESQNSDNVGENSVSSSPSTSSSAALNTAAATNPLALNPLLLSNILYPG
MLLTPGLNLHIPALSQSNIFDVQNNKNNDLDSTKPVEEKEEDSRVRDQEEKGETEPSSLN
ENSTDEGSEKADASSGSESTSSSSEESDSSNED
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgaaaactttcccagtgtttcagctgaaggaaaggaggaaaaaaaaggtaga
agaatgaaatctaagccaaaagataaggaaagcaagaaaacaaaaacttgttcctcaacc
aagttaaaggagaagacaaaaattgggaagctcattattacattgggtaagaagcaaaaa
agaaagaatgtgtcttcagatgaaatgtctgatgctgagcagattccacagcgtccattc
aaagatgcggattctcaacttcttatccaatggagagtagtggctcaaggctcctgggct
gctgcaagagttgagaagagaagatcgaatcgtcaagttaaaaggaaaaagtatgctgaa
gatgcagaaggaaaacagtcagaagaagaagcaaaagtttctgtgaaaatcagaaaaagt
tcagcctctttacccgctgaacaacctttgcagttatttgtggagaatccaagcgaagaa
gatgctgcaattgtggacaaaatactgtcttctagaatagtaaagaaagaaatatcatct
ggaatgatgattgatgcagaagaattttttgtaaaatacaagaattactcctatcttcac
tgtgaatgggccacagaacaacaacttttaaaagataaaagaatacagcagaaaatcaaa
agattcaaattgagacaagcacaacgagcccatttttttgcagatatggaagaagaacct
tttaaccctgactatgttgaagttgatagagtattagaagtttctttttgtgaagataag
gacactggtgagcctgtaatttactatttggtaaaatggtgctcattgccatatgaagat
agtacatgggaactaaaggaggatgtagatcaagcaaaaatagaagaatttgaacaattg
caagcctcaaggcctgactctaggcatttggaccgccctcttcctaatacatggaaaaag
atagaacagtccagagaatacaaaaatggcaaccagctcagggaatatcaactagaagga
ctcaactggctcttgtttaattggtacaatagacgaaactgcattttagctgatgaaatg
ggtcttggcaaaacaattcaatcaattacattcctctacgaaatacttctgactggtata
cgggggccttttctgatcattgcaccgctttcgacaattacaaactgggagagagaattt
cgcacatggactgatcttaatgttgtggtatatcatgggagcctggttagcaggcagatg
atacagcagtatgagatgtacttcagggactcacaggggcgtattattagaggagcatac
aggttccaggccataatcaccacttttgaaatgattctgggaggctgtggagagctcaat
gcaattgaatggcgatgtgtgattattgatgaagcacataggttaaagaataaaaattgc
aagcttctagaaggtctaaaactcatgaatctggaacacaaggtgcttttgactggtacg
ccacttcagaatacagttgaagaactattcagtcttcttcatttccttgaacccttacga
tttccctctgaaactacttttatgcaagaatttggggatcttaaaacagaagaacaggtg
caaaagcttcaagccattttaaaaccaatgatgttgagaagattaaaagaagatgtagaa
aagaagttggcccctaaagaggaaaccataattgaagtagaacttactaacattcagaag
aaatattaccgggctattttagaaaaaaattttgcatttttatccaaaggagctggacaa
gctaatgtacctaatttagttaacactatgatggaactcagaaaatgctgtaatcatccc
tatcttatcaaaggtgctgaggaaaaaatacttggagaatttaaagaaacacataaccca
gctgctcctgactttcatcttcaagcaatgatccagtctgctggcaaattggtcctcatt
gataagcttcttccaaaaatgaaagcaggtgggcataaagtgctcatcttctctcagatg
gtgcgctgcctagacattttagaggactatcttatacataagaggtatctatatgagcga
attgatggaagagtccgaggaaatcttcgacaggctgccatagaccggtttagtaaacct
gattcagacagatttgtatttcttttgtgcactcgagctggtgggctgggcattaattta
actgcagctgatacatgcatcatttttgattctgactggaatcctcaaaatgacctccag
gctcaagctcgatgtcacaggattggtcaaaacaaagcagtcaaagtctacagattaata
actcgtaactcatatgagagagagatgtttgaccgagcaagcctaaaattgggtctagat
aaggctgtgttacagagcatgagtggaagagaaaatagtgttggcggtattcagcaactg
tccaaaaaggaaatagaagatctacttcgaaggggtgcatatggtgccattatggatgaa
gaagatgagggttctaaattctgtgaagaggatattgatcagattttacagcgtcgcaca
aaaacaatcacaattgaatcagaaggaagaggttcaacatttgctaaggcgagttttgta
gcttctggaaaccggactgatatttccttagatgatcccaacttttggcagaaatgggca
aagaaagcagaaattgatatagatgccatcagtggcagaaacagcttagttattgatact
ccaaggattagaaaacaaacaagaccctttagtgccacgaaagatgaattggctgaattg
tctgaagttgaaagtgagggagatgataagcccaaactccggagaccatgtgaccgttcc
aatggctatggaaggacagaatgctttcgagtggagaaaaatctactagtttatgggtgg
ggtcgatggagagagattctagctcatggtcggtttaaaagacaactaaatgaacaagat
gtggagatcatttgccgagcccttttagcatattgccttgttcactacagaggagatgag
aagattaagggtttcatatgggatctcattactcctacggaggatgggcaaacaagagaa
ttgcaaaatcatctgggtctgtcagctcctgtccccaggggcagaaaagggaagaaagtg
aaaactcaaacaagcacatttgatatccataaagcagaatggcttcgaaagtataatcct
gagcatctactacaagatgaaggctataaaaaacacataaaacatcattgtaataaggtt
ttgcttcgagtgaggatgctgtattatttgaaacaagaagtcattggtaatgaattccag
aaagtgtttgatggagttgaagcaagtgacattgatgtttgggtccctgagccagaccat
tctgaagtccctgctgcgtggtgggatcttgatgcagataaatctcttcttattggagtt
tttaaacatggttatgaaaagtacaacacaatcagagcagacccagcattgtgtttcttg
gatcgagtaggaaaacctgatgagaaagcagttgctgctgagcaaagagcaaatgattac
atggatggggatgtggaagacccagaatataaaccagctccagctttattcaaagatgac
ttggaggatgatatttcatcaccaggagaccttgtaatagcagatggagatggccaaatg
atggaaggagacaagatttattggcctactcagtctgctttaaccacacgcttgcgccgc
ctcataactgcatatcaacggactagtaaaaatagacaagcccaacaaatccagccagca
ttctcagtacaggccaacgtgatgcagcctctttatgaagaaactgctcttaaccctaaa
atagcagccaaaattgaaaaacagcagagatggacaagaagagaggaagctgacttttat
agagttgtgtctacttttggagtggtatttgatcctgacagaggacaatttgactggaca
aaatttagagccatggctaggctgcacaagaaaactgatgatagtttggaaaagtactta
tatgcttttatgtccatgtgcaggagagtttgccgccttccttccaaagaagaattggtg
gacccaagtatttttatccaacccatcacagaggaacgtgcttctaggactttgtatcga
attgagcttttgaggaaagtacgagaacaggctcttcgacatccacaattatttgatcgt
ttaaaactttgccagccaaatccagatttgccagtttggtgggagtgtggcactcatgac
agagatttgcttattggagctgctaagcatggggttagcaggacagactatcacattctt
cgggatcctgaactttcatttatggcagctcagagaagctatagtcaaaataaagggact
cattcaaggacttctgccccacttatacaacagtatcaaatggcactgtctacttcccct
ctggcttctcaaccaaggttactggatactaaagggaatgctcttgaagacacaaaagtt
aaaaatgaaagccttaaagaggagcctcagtcttctgaagaggaatctatatcttctgac
gaaatcagaacaggaataaaatctgaacctttaagtccaaagaatggtgttttgccacag
acaactggagagcagaagcctactgggaagactgaaacagatagacgcatggttgcagcc
aggacagaacccctaaccccaaacccagcttccaagaaacagcgaatgcccaaaagggga
tctgagtccagctctgattcagattctgattctgatagatcatcttgttcttctagatcg
tcatcttcctcctcctcctcttcttcctcttgttcccactctcgatcaggatctagttct
tcatcatcttcatcttgttcttcagcaacttcttcatcctcttcttcctcttcctcttcc
tcctcttcttcatcctcatcagaagaaagtgatagtgaagaagaagcacaaaagcgagca
gaaggcaccactcacatgaaatcatatgatgaagaaagtgttgcatcactaagcactata
caagatgagacccaagatagttttcagatgaacaatggaacaccaaattctgcttacatc
ttacaaggtggatacatgctcgctgcttcttattggccaaaggatcgggtaatgatcaat
cggttagacagcatttgtcaaacggtcctgaaaggaaaatggccatcagtccggagaggt
tacgagggcagtgcagtggcatctttctacacaaccaagcttctggacagccccggtgct
gctgcagatgctggcgagccccatgtgacgactcccccaagtgtaggggcaagagaagag
catgaccagtccacacagatgtcaaaggtgaagaagcatgtacgagaaaaggagtttaca
gtgaaaatcaatgacgaaggaggtttgaagttgacttttcaaaagcaaggactttctcag
aaaaggccatttgaaagtgaagatggttcacttggacagcagcagtacctggcacggctt
cgggaacttcagaatgcttcagagaccagcctagtcaattttccaaagtccatgccagta
tcagatacgtctagtcagccagcagttggtgccaatggagtcatattagataaccagcct
atagtcaaaaaaagaagaggaagaaggaagaatgtggaagatgttgacattctcctatta
aatagaaataaacctcctaatcatgttacagtaggcattaccacctcacaaattactcca
gggataaatccagcactgtcttatactcaatctcaaggattacttgatatagaaaatcca
gttccagttattaatctgaaagatggaacaagacttgcaggtgatgatgcaccaaaacga
aaggatttagaaaaatggcttacggagcacccaggttatgtggaagatttaggagccttt
attcctagaatgcaacttcatgaaggggggagacctaagcaaaaaagacatcgttgcaga
aaccccaacaaattagatattaatagtctcactggagaagaacgtgttcagttgatcaac
agaagaaatgccagaaaggtaggaggagcatttgctcctcctttgaaagatttatgtaga
ttcttgaaagaaaattctgaatacggagtcgctcctgaatggggagatgttgttaaacag
tctggatttcttcctgaaagcatgcatgaccgtattcttactgggcctgttgtaagagaa
gaagtaagcaggcgtggaagacggcctaaaagtgagattgccaaggcaacggcggcggca
gctgctgcaacagcagcaaatgtgtctggcaatcctttgctagccaatggattgctccca
ggtgtggatctgacaactcttcaggccttacaacaaaacctgcaaaaccttcagtctcta
caagtaactgcaggattgatggggatgcctgccagcctatctggtggagaagtgaataaa
aacatggctgctatgttcccaatgcttttgtcagggatgacaggattaccaaatttacta
ggcatgggaggactcctaacaaaacctacagaatctgtggcagaagagaaaaagggcaat
gactccaaggagccagatggaagaaaagaaaggacagaaagccaaaactctgacaatgtt
ggggaaaactctgtttcgagttctccttcaacatcctcttctgctgcattaaatactgct
gcagctaccaaccccttagctcttaacccattactattgtccaatatactatatccaggg
atgcttctcactccaggccttaatcttcatatcccagctttgtcccagtccaatattttt
gatgtacagaacaacaaaaacaatgatctagactcaaccaagcctgtagaggaaaaagag
gaagattccagggttagagatcaggaagaaaaaggggaaactgaaccaagttctctcaat
gaaaacagcacagatgagggttcagaaaaagcagatgcttcatctggatctgagagtaca
tcatcatcatctgaggagtcagattctagtaatgaagactga
DBGET
integrated database retrieval system
