Sarcophilus harrisii (Tasmanian devil): 100932185
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Entry
100932185 CDS
T02286
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04726
Serotonergic synapse
shr05010
Alzheimer disease
shr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100932185 (APP)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100932185 (APP)
05022 Pathways of neurodegeneration - multiple diseases
100932185 (APP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shr01002
]
100932185 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shr00535
]
100932185 (APP)
00536 Glycosaminoglycan binding proteins [BR:
shr00536
]
100932185 (APP)
Peptidases and inhibitors [BR:
shr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
100932185 (APP)
Proteoglycans [BR:
shr00535
]
Cell surface proteoglycans
Others
100932185 (APP)
Glycosaminoglycan binding proteins [BR:
shr00536
]
Heparan sulfate / Heparin
Others
100932185 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Kunitz_BPTI
Beta-APP
Insulin_TMD
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
100932185
NCBI-ProteinID:
XP_012402203
Ensembl:
ENSSHAG00000002134
LinkDB
All DBs
Position
3:complement(237492328..237666342)
Genome browser
AA seq
750 aa
AA seq
DB search
MLPPLVPLVLFSWTVGALEVSTDGNAGLLAEPQIAMICGKLNMHMNVQNGKWETDPSGTK
TCIGAKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKSSPHIVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDICETHLHWHTVAKETCSEKSMNLHNYGMLLPCGIDKFR
GVEFVCCPLADENDNVDSADAEDDDSEVWWGGADADYADGSDDKVIEVAEEEEVVDVEDE
DNNDDDGDGDEVEETEEQYEEATERTTSVASTTTTTTTTESVEEVVREVCSEQAETGPCQ
AMISRWYFDVTERKCAPFFYGGCGGNRNNFGTEEYCMAVCGNIIPTTAASTPDAVDKYLE
TPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAEHQAKNLPKADKKAVIQHFQEKVE
SLEQEAANERQQLVETHMARVEAMLNDRRRMALENYITALQAVPPRPRHVFNMLKKYVRA
EQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQD
EVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLSETKTTVELLPVDGEFSLDDLQP
WHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSG
YEVHHQKLVFFAEDMSSNKGAIIGLMVGGIVIATVIVFTLVMLRKKQYTSIHHGVVEIDA
AVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctcctttggtgccgttggtgctgttctcctggactgttggagccctggaggtg
tctactgatggaaatgctggactcttggctgaaccccagattgccatgatctgtggcaaa
ctcaatatgcatatgaatgtgcagaatgggaaatgggagactgacccatcgggaacaaaa
acttgcattggagcaaaagaggggattttgcagtactgccaggaggtctatccggaacta
cagattaccaatgttgtggaagctaaccaaccagtgacaattcagaactggtgtaagaga
ggccgaaagcagtgcaagagttctccccatattgtcattccttatcgatgcttagttggt
gaatttgtgagtgatgctcttttagtgccagacaagtgcaaattcttgcaccaagaaagg
atggatatatgtgaaactcatctccactggcatactgttgcaaaagagacttgtagtgaa
aagagcatgaatctgcataactatggtatgttgctgccttgtggaattgacaagttccgt
ggtgtagagtttgtttgttgcccactagctgatgaaaatgacaacgtggattctgcagat
gcagaagatgatgattcagaagtctggtggggaggtgcagatgcagattatgcagatgga
agtgatgacaaagtaatagaagttgcagaagaggaggaagtagttgatgtagaagatgaa
gataacaatgatgatgatggtgatggagatgaagtagaagagactgaggaacaatatgaa
gaggctacagaaagaaccactagtgttgccagtaccaccactaccactaccactactgaa
tctgtagaagaggttgttagagaggtgtgctctgaacaagctgagactggtccttgtcaa
gcaatgatctcccgttggtactttgatgtgactgaaaggaagtgcgcaccgtttttttac
ggcggatgtggtggaaaccgaaacaactttggcactgaggaatactgcatggcagtctgt
ggcaacatcatccccactacagcagccagcacccctgatgctgttgacaaatatctagag
acacctggtgatgagaatgaacacgcccatttccagaaagccaaggagagacttgaagcc
aagcaccgtgaaagaatgtctcaggttatgagagaatgggaagaggcagaacatcaagca
aagaacttgcccaaagctgataagaaagcggttattcagcatttccaggaaaaagtggaa
tcattagaacaagaagctgcgaacgagaggcaacaattggtagagacacacatggccaga
gtcgaagctatgcttaatgaccgccgtcgtatggctctggagaactacatcacagccctc
caggcggttcctccacggccacgtcatgtattcaacatgctgaagaaatatgtacgtgct
gaacagaaagataggcaacataccttaaagcattttgaacatgttcgtatggtggatcca
aagaaagctgcccaaatcagatctcaggtcatgacacacttgcgtgtgatttatgagagg
atgaaccagtctctctctctgctctacaatgtgccagcagtagctgaagaaattcaggat
gaagttgatgagctgcttcagaaagagcaaaactactcagatgatgttttggccaacatg
atcagtgaacccaggatcagttatggaaatgatgccctcatgccatcgctgagtgaaact
aaaaccacagtagaactccttccagttgatggagaattcagcctagatgacctgcagcca
tggcatccttttggtgttgattctgttccagctaacacagaaaatgaagttgaacctgtt
gatgcccgccctgctgctgatcgaggactaacaactcgaccaggttctggactaacaaac
ataaaaacagaggaaatctcagaagtgaagatggatgcagagttccgacatgattcagga
tatgaagtgcatcatcaaaaattggtattctttgctgaagatatgagttcaaacaaaggt
gcaatcattggactcatggtgggtggcattgtcatagcaacggttattgtcttcaccttg
gtaatgctgaggaagaaacagtacacatctatccaccatggtgtagtagagattgatgct
gcagttacccccgaggagcgtcacctttccaagatgcagcaaaatggctacgaaaatcca
acttacaagttctttgaacagatgcagaactag
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