Sarcophilus harrisii (Tasmanian devil): 100932281
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Entry
100932281 CDS
T02286
Symbol
COL21A1
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100932281 (COL21A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
VWA_3
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
100932281
NCBI-ProteinID:
XP_031820564
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Position
4:252726178..252970895
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AA seq
957 aa
AA seq
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MAYHTKYLQVILILLLQDFVSAEDGEIRSSCRTAPTDLVFILDGSYSVGPENFEIVKKWL
VNISNNFDIGPKFIQVGVVQYSDYPVLEIPLGSHHSGENLMEAMESLHYLGGNTRTGKAI
QFALDHLFAKSPRFITKIAVVLTDGKSQDEVKDAAEAARDNRITLFAIGVGSETEDAELR
AIANKPSSTYVFYVEDYIAISKIREVIKQKLCEESVCPTRIPVAARDEKGFDILLGLGVK
KKVKKRIPLSPTKTKAYEITSQVDLSEVTSNVFPEGLPPSYVYVSTQRFKVKKRWDLWRI
VTSDGRPQIAVTLNGAEKTLSFTTTSIMNGTQVVVFADPDVKILFDEGWHQIRLLVTEQD
VTLYIDDQQIKSKPLHPVLGIYVSGQTQIGKYSGKEETVQFDVQKLRIYCDPEQNNRETA
CEIPGFNGECLNGPSDVGSTPAPCVCPPGKPGLQGPKGEPGQPGNHGYPGQPGQDGKPGY
QGISGNPGIPGSPGIQGARGLPGYKGEPGRGGNKGDRGLPGFPGQHGMPGSKGDMGPKGE
KGSPGFYGKKGAKGEKGNTGFPGLPGRSGEPGRDGKDGLMGSQGFKGETGQQGAPGPEGQ
RGEPGIPGFPGSQGLMGQKGETGPPGPQGKKGAPGLNGLMGQDGSPGQPGTPGLKGNRGE
PGVQGISGSPGIKGEQGLSGPPGEPGYPGLPGTPGKKGDNGNPGEKGPQGQKGENGRSGD
PGPQGIPGHLGAKGEKGEKGDSGSRGVSGPKGESGMDGLMGPIGPRGQHGETGPRGPPGL
DGKPGREFSEQFIRQVCTDVLRAQLPVLLHSGRLQNCDHCQSQKGSPGLPGPPGPMGPEG
PRGFPGLPGRDGVPGLMGTPGHPGARGLKGQPGRNGAKGNQGFGHPGEQGPPGPPGPEGP
PGISKEGHPGEPGPPGKDGDRGNPGIQGPTGPPGICDPSLCFSVIVGRDPFRKGPNY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccacacaaaatatcttcaagtaattctcattcttttgcttcaggattttgta
tcagctgaagatggtgaaataagatcaagttgcagaacagctccaacagacttggtgttc
atcttagatggttcctatagtgttggcccagaaaactttgaaatagttaaaaaatggctt
gtaaatatatcaaataattttgatataggaccaaaatttattcaagttggtgtggttcag
tatagtgattatcctgtacttgagattcccctgggaagccaccactctggagagaactta
atggaagcaatggaatctcttcattacttgggtgggaatacaaggacaggaaaagctatt
cagtttgcgcttgatcatctttttgctaaatcaccaagatttataactaaaatagcggtt
gttcttactgatggcaaatcccaagatgaagtgaaagatgcagcagaagctgcaagagac
aatcgaataactttgtttgccattggtgttggttcagaaactgaagatgctgaacttaga
gcaattgccaataagccttcatcaacctatgttttttatgtagaagattacattgcaatt
tccaaaataagagaagtaataaaacaaaaactttgtgaagaatctgtttgtccaacacga
attccagtggcagcccgggatgagaagggatttgacattcttttagggttgggtgtaaag
aagaaagtaaagaaaaggattccactttcaccaactaagacaaaagcatatgaaataaca
tcacaagttgatttatcagaagtcacaagcaatgttttcccagaaggtcttcctccttca
tatgtatatgtctccactcagaggtttaaagtaaagaaaaggtgggacttatggagaatc
gttaccagtgatggaagaccccaaattgctgttaccttaaatggagctgaaaaaactcta
tcatttactaccaccagcataatgaatggcactcaagtggttgtttttgcagatcctgat
gttaagattctgtttgatgaaggctggcatcaaatccgtctcttagtaactgaacaggat
gtaactttgtatattgatgatcagcaaataaaaagcaagccattacatccagttttaggt
atttatgtcagtggccaaacccaaattgggaagtactctgggaaagaagaaactgttcag
tttgatgttcaaaaactaagaatctactgtgatccagaacaaaataaccgtgaaacagct
tgtgaaatccctggatttaatggagagtgcttgaatggtcccagtgatgtaggctctact
ccagctccttgtgtatgtccaccaggaaaaccaggactacaaggccccaaaggagaacct
gggcaacctgggaatcatggctatccaggacagcctggtcaagatggtaagcctggatat
caaggaatttcaggaaatccaggtattccaggatcaccagggattcaaggagcacgtgga
ttaccaggttacaaaggagaaccaggaagaggtggtaataagggtgatcgtggacttcca
ggttttcctggtcagcatgggatgccaggatcgaagggtgacatgggacccaaaggagaa
aaaggatcacctggattttatgggaaaaagggtgcaaaaggtgaaaaaggaaatactggt
tttccaggtcttcctggacgttctggagagcctggaagagatggaaaggatggcttaatg
ggcagccaaggattcaagggagaaacaggacaacaaggtgctccaggaccagaaggccaa
cgaggagaacctggaatacctggatttcctgggagtcaaggtttaatgggacaaaaagga
gaaactgggcctcctggaccacaaggaaagaaaggagcacctgggttaaatggtttaatg
ggacaagatgggtcacctggtcagcctggaacacctggattgaagggaaatagaggtgaa
cctggagttcaaggaatatctggatctcctgggatcaagggagaacaaggattatcaggt
ccaccaggagaaccaggatacccaggcttaccggggacaccaggaaaaaagggtgacaat
ggaaacccaggtgaaaaaggtcctcagggtcaaaagggagaaaatggaagatcaggggat
ccaggaccacagggaataccaggtcatcttggagcaaaaggagagaagggtgaaaaggga
gactctggcagtagaggtgtcagtgggcctaaaggagaatcagggatggatggcttaatg
ggccctattggtccaagaggacaacatggagaaacaggccctcgaggacctcctggatta
gatggaaaaccagggagagaattttcagagcaattcatacggcaagtttgcacagatgtt
ttgagagcccagctaccagtcttacttcatagtggaagattacaaaactgcgaccactgt
caatctcaaaagggttcccctggccttcctgggccacctggtccaatgggaccagaaggt
ccaagaggatttcctggtttgccaggaagagatggtgttcctggactaatgggaactcct
ggacatccaggggctcgagggctaaaaggacaaccaggaagaaatggggcaaaaggtaac
caaggctttgggcatcctggagaacaaggccccccaggccctccaggtcctgagggtcct
cctggaattagcaaagaagggcatcctggagaaccaggtccacctggcaaagatggtgac
cgtggaaatcctggaatacaagggccaactggacctcctggaatctgtgatccatcttta
tgtttcagtgtgattgttggaagagatccatttagaaaagggccgaactattaa
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