Sarcophilus harrisii (Tasmanian devil): 100932321
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Entry
100932321 CDS
T02286
Symbol
CDH12
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100932321 (CDH12)
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Major cadherins
100932321 (CDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Stevor
DUF443
Motif
Other DBs
NCBI-GeneID:
100932321
NCBI-ProteinID:
XP_003759689
Ensembl:
ENSSHAG00000009110
UniProt:
G3W548
LinkDB
All DBs
Position
1:complement(412486581..413376795)
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AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLQSQPQQTLATESRENVFIMPGRQSPAQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGVGSVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIHTRKPLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPESSLVGSAIGRIRAVDPDFGK
NAEIEYNIVPGDGGNLFDIMTDEDTQEGIIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SVGPFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAIRY
FIDWKSDGDNYFTIDGTEGTIATNELLDRESTPQYNFSIIASKISNPSLTSKVNVLINVL
DVNEFPPEISVPYETAVCENAKPGQVIQIISAADRDLSPAGQQFSFRLSPEAAIKPNFTV
RDYRNNTAGIETRRNGYSRRQQEFYFLPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYIALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDTLCLPRQRPPVEDNTDIRDFINQR
LQENDVDPTAPPYDSLATYAYEGNGSVAESLSSIDSRTTEADQDYDFLTDWGPRFKVLAD
MFGEEESYNSDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcttatccctgcttctctgggtcctgtttgatggaggtctccta
acaccactgcagtcacaaccacaacagactttagccacagagtcaagagaaaatgttttc
atcatgccaggaaggcaatcacctgcccagcgtgttaaacgtggctgggtttggaatcaa
ttttttgtcctggaagagtacatgggctcggaacctcagtatgtgggaaagcttcattcc
gacttagacaaaggagtgggcagtgttaaatacaccctctcaggagatggagctggcaca
gtttttaccattgatgaaaccacaggagacattcatgccataagaagccttgatcgagaa
gaaaaacctttctatactctccgtgctcaggctgtggacatacataccaggaaacccctg
gaacctgagtcagaattcatcatcaaagtgcaggacattaatgataatgagccaaagttc
ttggatggaccttatgttgctagtgtcccagaaatgtctcccgtgggtgcatatgtgctt
caggtaaaagccacagatgcagatgatccaacctatggaaatagtgccagagtggtttat
agcatccttcagggacaaccttatttctctatcgatcctaagacaggtgtaattagaaca
gccttgccaaatatggacagggaggtcaaagaacaatatcaagtactcatccaagccaag
gacatgggaggacagctgggaggactagcaggaaccaccacagtgaacatcactctcact
gatgtcaatgacaatccacctagattccccaaaagtatttttcatctaaaagtaccagag
tcttctctagttggctcagctattggaaggatcagagctgtggacccagattttgggaaa
aatgcagaaattgaatacaacattgttccaggagatgggggaaacttgtttgacatcatg
acagatgaagatacacaggaaggaattatcaaattgaaaaagccattagattttgaaaca
aaaaaggcatatactttcaaagtagaagcttccaaccttcatcttgaccaccgcttccac
tcagtgggtcctttcaaagatacagcaactgtgaagatcagtgtgttggatgtggatgaa
cctccagtctttagcaaacctctctataccatggaagtttatgaagacactcctgttggg
accataattggagctgttaccgcacaagatcttgatgttggcagcagtgctattaggtac
ttcatagattggaagagtgatggggacaattactttacaatagatggaactgaaggaacc
attgctactaatgaattattggacagagaaagcactccacagtataatttctctataatt
gcaagtaaaattagtaacccatcactaaccagcaaggtcaacgttcttattaatgtcctg
gatgtcaatgaatttcctccagaaatttctgtaccgtatgagacagcagtgtgtgaaaat
gctaaaccaggacaggtaattcagatcatcagtgctgcagaccgagatctttcacctgct
gggcaacaattctcctttagattatcacctgaggctgctatcaaacctaattttacagtc
cgtgactacagaaacaacacagctggaattgaaactagaagaaatggatacagccgcagg
cagcaagagttttattttctcccagtggtgatcgaggacagcagttacccagtccagagc
agcacaaatacaatgactattcgagtctgtaggtgtgattctgatggtaccatcctgtct
tgcaacgtggaggcaatttttctacctgtaggactcagcactggtgctttgattgcaatc
ttactttgtatagttattctcttagccattgttgtgttgtatatcgccctgcgaagacag
aagaaaaaagacaccctgatgacctctaaagaagacatcagagacaatgttatccattat
gatgatgaaggaggtggggaggaggacactcaggctttcgacattggtgccctgagaaat
ccaaaagtgattgaagataacaaaatacgcagggatataaaaccagacactctctgttta
cctcgtcagagaccaccagtggaagataacacagacataagagatttcattaatcaaagg
ctacaggaaaatgatgtggatcccacagcacctccatatgattcattggcaacatatgcc
tatgaaggcaatggatctgtagcagagtccctcagctccatagactcacgcactacagaa
gcagaccaagattatgacttcctgactgactggggaccacgctttaaagtcttggcagac
atgtttggagaggaagaaagttataactctgacaaagtcacttag
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