KEGG   Sarcophilus harrisii (Tasmanian devil): 100932538
Entry
100932538         CDS       T02286                                 
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013  Nucleocytoplasmic transport
shr03015  mRNA surveillance pathway
shr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100932538 (EIF4A3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100932538 (EIF4A3)
   03015 mRNA surveillance pathway
    100932538 (EIF4A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100932538 (EIF4A3)
   03041 Spliceosome [BR:shr03041]
    100932538 (EIF4A3)
   03009 Ribosome biogenesis [BR:shr03009]
    100932538 (EIF4A3)
   03012 Translation factors [BR:shr03012]
    100932538 (EIF4A3)
Enzymes [BR:shr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100932538 (EIF4A3)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100932538 (EIF4A3)
   mRNA cycle factors
    Stress granule specific factors
     100932538 (EIF4A3)
Spliceosome [BR:shr03041]
 Complex C
  Other components
   EJC/TREX
    100932538 (EIF4A3)
Ribosome biogenesis [BR:shr03009]
 Eukaryotic type
  90S particles
   Helicases
    100932538 (EIF4A3)
Translation factors [BR:shr03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100932538 (EIF4A3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 AAA_30 AAA_22
Other DBs
NCBI-GeneID: 100932538
NCBI-ProteinID: XP_031821448
Ensembl: ENSSHAG00000005751
UniProt: A0A7N4P6M1
LinkDB
Position
4:complement(304721935..304742445)
AA seq 411 aa
MAAAATMAASGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHGCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggctgccgcggccacgatggctgcttcgggttccgcgcgaaagcggctgctgaaggag
gaggatatgaccaaagtggagttcgagaccagcgaagaggtggacgtgacgcccaccttc
gacacgatggggttgcgggaggatctgctgcgtggcatatacgcctacggttttgagaaa
ccatcagctatccaacaacgggctatcaaacaaattattaaaggaagagatgtcattgca
cagtctcagtctggtacgggtaaaacagcaacatttagcatttcagttctccagtgtttg
gatattcaggtgcgagaaacccaggctttaatattagccccaaccagggaattagctgtc
caaattcaaaagggtctccttgctcttggtgattacatgaatgttcaatgtcatggctgt
attggggggacaaatgttggtgaagatatcaggaaattggattatgggcagcatgttgtt
gctggtacaccaggtcgtgtatttgatatgattcgtcgcagaagtttaagaacccgtgct
atcaagatgttggttttggatgaagctgatgaaatgcttaataaagggttcaaggaacaa
atttatgatgtgtacagatacctgcctccagctactcaggtggttttaatcagtgctaca
ttgccacatgaaatcttagaaatgaccaacaaattcatgactgatccaattcgcatctta
gtaaaacgtgatgaattgactctcgaaggaatcaaacaattttttgtggcggtggaaagg
gaagaatggaaatttgatactttgtgtgatctttatgataccttgaccatcactcaagca
gtcatcttttgtaataccaagaggaaggtagactggttgactgaaaagatgagagaagcc
aatttcaccgtttcatcaatgcatggagacatgccccagaaagagagagagtccatcatg
aaagagtttagatctggtgcaagccgagtactcatttctacagatgtctgggccagagga
ttagatgttcctcaagtctctctaatcattaattatgacttacccaataatagagaatta
tacatacacagaattgggagatcaggtcgatatggccgaaagggtgttgcaattaatttt
gtcaagaatgatgacatccgtattctcagagatattgaacagtactactcaacacaaatt
gatgaaatgcccatgaatgttgctgatcttatctga

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