Sarcophilus harrisii (Tasmanian devil): 100932580
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Entry
100932580 CDS
T02286
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100932580 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100932580 (NIPBL)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
100932580 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
HEAT_GCN1_C
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
100932580
NCBI-ProteinID:
XP_031820063
LinkDB
All DBs
Position
1:127972563..128222769
Genome browser
AA seq
2919 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHTLNQVSTDHIELKDNLGSDDPEGDIPVLLQSVLARNPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRYMAQPNSPVPSPYAP
QSPAGYMPYSHPPSYTPHPQMQQASVSSPIVPSGLRNMHDNKVSGQLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGIENSNVSESDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVTAKQPQTSVVQSQQQAPQQGTLYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSAGNGSRPALM
VSIDLHQAGRVESQASVTQDSDTIKKPEESKQCNDGAVSVHQEDIGVLKQKPENHPETPR
KKSDSENVKTEMKQNENKLMESKPNENRLLETKLNENRPIAETKQNENRPAAETKQKESK
LVAETKQTESRPVPEVKQTESRSLIEAKHNESKPEAKPNENRPATVEVKQNESKSTEAKQ
TESRPVTEVKQPESKPTADAKQNESKVAEIKQNENRIETKQNESKTAESKQNENKTTDTK
SNENKQNNGKQETTKLRPETPKQKAEGRPETPKQKAEGRPETPKQKSDGRPETPKQKGDG
RPETPKQKGDGRPETPRHRHERRDSGKASAEKKPETRHKQDAKSDSPRLKSERSETLKQR
PDGRSVSESLRRDHDNKQKSEDRSESERHRGDQSRIRRPDTLRSSNRNEHDPKHGVKSDG
SKTDKLERKHRHESGESRERLSSGEQKSRPDSPRVKESRGDTSKTRSDRSGFKSPNSKDD
RRTDGNKSKVDSNKAHPENKADFPSYLLGGRSGALKNFVIPKIKRDKDGNVTQETRKMEL
KGEQRDKIEKLGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREDRSRSLKASKNKPSKSN
KGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEDA
FESSRKRHKKDKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRSSGGGRYRNRSPSDSDME
DYSPPPSLSEVARKMKKREKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMD
FTAFGDDEEIPQELLLGKHQLSELGSESAKIKAMGIMDKLATDKTVKVLNILEKNIQDGS
KLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVI
QYTKFHLQNTLYPQYDPVYRVDPHGGGVLTSKAKRAKCSTHKQRVIVMLYNKVCDIVSSL
AELLEIQLLTDTTILQISSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIF
TSLARLPTSKRSLRNFRSLLTVTLTVLCILNSSDMDGEPMYIQMVTALVLQLIQCVVHLP
SAEKDSNSEEESNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENF
VQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAV
TSKMDQGSIARILKQVTGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTT
LETEKAMKSQKDEDSSEGTHHAKEVETTGQIMHRAESRKKFLRSIIKTTPSQFSTLKMNS
DTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPS
ILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVR
KRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEA
MTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKY
EESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVIC
NVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKF
VWACFNRYYGALSKLKIQHQEDSNSTILTTNKPALLRSLFTVGALCRHFDFDQEDFKGSS
KVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILADKNS
SVNLKIQVLKNLQTYLQEEDTRMQQADKDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQ
VLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEI
DKKYAGFIHMKAVAGMKMSYQVQQAINTSPKDAVRGFRQDESSSALCSHLYSMIRGNRQH
RRAFLIALLNLFDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLL
QSFKESMVKDKRKEKKPSPNRESASGSDSEEEVSKPRKSRKRVDSDSDSDEEDDINAVMK
CLPDNSSPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKT
GIHFHPKQTLDFLRSDMSNSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVSASTN
ARNKAITSLLGGGSPKNNAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESV
DVMDVIAICCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDT
IKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8760 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcggggattgctagtctcaca
gacctcttgaatcagttgcctcttccatctccgttacctgctacaactacaaagagcctt
ctgtttaatggacgaatagcagaagaggtaaactgtcttttggcctgtagggatgaaaat
ttggtttcacagcttgttcacaccctcaaccaggtgtcaacagatcacatagagttgaaa
gataatcttggtagtgatgatccagaaggagacataccagtcttgctgcagtctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcagaacagatacgtacagagtgga
atgatgatgtcccagtataaactttctcaaaattccatgcacagtagtcctgcatcttcc
aattatcaacaaaccactatctcacatagcccttccagccgatttgtgcccccacagaca
agctctgggaacagatatatggcacaaccaaacagcccagtgcctagtccatatgcccca
cagagccctgcaggatacatgccatactcacatcctccaagttacacaccacatccacag
atgcagcaagcatcagtatcaagtcccattgtcccaagtgggctgagaaacatgcatgat
aataaagtttctggtcagttgtctggcaattcagctaatcatcatgctgataatcctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgatgatggagat
tcttctacaatgaggaatgctgcatcatttcctttgaggtctccacagccagtgtgctcc
ccagctggaagtgatggaactcccaaaggatcaagaccaccgttaatcctacagtctcaa
cctccaccctattcatcacctagagatgttccacccgacatattattagattcaccagaa
agaaaacagaagaaacaaaagaaaatgaagttaggaaaagatgaaaaagatcagagtgaa
aaggctgcaatgtatgatatcattagttctccatctaaggactctactaaacttacatta
agactttctcgcgtaagatcttcagatatggaccagcaggaagatatgctttctggtata
gaaaatagcaatgtatcagagagtgatattccttttaatgtgcagtacccaggacaaact
tcaaaaacacccattacaccacaggatgttaaccgcccgctaaatgctgctcagtgtttg
ccgcagcatgaacagacagcattccttcaggcacaacaagtgcctgttttacaacagaat
acttcagtgactgcaaaacaacctcagacttctgtggtacaatctcaacaacaagcacca
caacaaggaacgctatatgatgaagtagaattggatgcattggctgaaatcgagaggata
gaacgggaatcggctattgaaagagaacgtttttcaaaggaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctactggaggt
aatagaccagcttctcaggagacaggttctgcaggcaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggacgagtagagtctcaggcatctgtaactcaggat
tcagacaccattaaaaagcctgaagaaagcaaacaatgtaatgatggggctgtttctgtt
catcaagaagatattggagttcttaaacaaaaacctgaaaaccatcctgagacccctagg
aaaaagtctgattctgaaaatgtaaagactgaaatgaagcaaaatgaaaacaaactgatg
gaatctaaaccaaatgaaaaccgattattggagacaaaattgaatgagaacagaccaata
gcagaaactaaacagaatgagaatagaccagcagcagaaactaaacagaaagaaagcaaa
ttggtggcagaaacaaagcagactgagagcagaccagtgccagaagttaagcagactgag
agcagatctctcatagaagccaagcataatgaaagtaaaccagaagctaaacccaatgag
aacagaccagcaacagtggaagtgaagcagaatgagagcaagtcaacagaagcaaagcag
actgaaagtagaccagtgacagaagttaaacagcctgagagcaaaccaacagcagatgct
aaacaaaatgagagtaaagttgcagaaattaaacagaatgaaaatagaatagaaactaaa
caaaatgagagcaaaacggcagaatcaaaacaaaacgaaaacaaaaccacagacacaaaa
tcaaatgagaataaacaaaataatggtaaacaagaaacaaccaagctgagacctgaaact
cccaagcaaaaagctgagggccgacctgaaactcccaagcaaaaagctgagggccgacct
gaaactcccaaacagaaaagtgatggtcgccctgaaacccccaagcagaagggtgatggc
cgccctgaaacccccaagcagaagggtgatggccgccctgaaactccaagacatagacat
gagaggagagattctggaaaggcatctgcagaaaagaaacctgaaacaagacataaacag
gatgctaaatctgattctcctcgattaaaatctgagagatcagaaaccttaaagcaaagg
ccagatggacgatctgtttctgagtcactaaggcgtgaccatgataataaacagaaatcg
gaggataggtctgaatcagagagacatcgaggagatcaatccagaattcgaagaccagat
acattaagatcctctaacagaaatgaacacgatcccaaacatggcgttaaatctgacggt
tcaaaaacagataaactagaaagaaaacacagacatgaatctggggaatccagggaaaga
ctgtcttctggggaacagaaatcaagacctgatagtcctcgtgttaaagagagtagaggt
gatactagtaaaacaagatctgatagatctggttttaaatcaccaaatagtaaagatgac
cggaggacagatggtaataaaagtaaagtagatagtaataaagcacaccctgaaaataaa
gccgattttcccagttatttgttggggggcagatctggtgcattgaaaaattttgtcatt
ccaaaaatcaagagagataaagatggcaatgttactcaggagacaaggaaaatggaactt
aagggggaacagagagacaaaattgaaaaattgggactagtagaagatttaaataaagga
gctaaacctgtagttgtcctgcagaagctgtctttggatgatgttcagaaattaattaag
gatagagaggacagatcaagatctcttaaagctagcaagaataagccatccaaatcaaat
aaaggtagtatagatcagtcagtgttaaaagaattaccccctgagctcctggcagaaatt
gaatctaccatgccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcacagtt
aatgaaaagccaaaatatgctgaaatcagttcggatgaagacaatgacagtgaagatgct
tttgaatcttctcggaaacgacataagaaggacaaagatgatgataaagcttgggaatat
gaagagcgtgacagacgaagctctggggatcataggagaagtggccattctcatgaaggc
aggaggagttccggtggtggccgttatcgaaatcgaagcccatcagattcagacatggaa
gattattctcctcctcccagccttagtgaggttgctagaaaaatgaagaaaagagaaaag
caaaagaagcggaaagcttatgaaccaaaactaacacctgaagaaatgatggattcttct
acttttaaaagatttactgcttcaatagaaaatatcttagaaaatcttgaagacatggat
tttacagcatttggtgatgatgaagaaattcctcaggaactgctattgggaaaacatcag
cttagtgaactgggcagtgaatctgctaaaattaaagcaatgggaataatggataagctt
gctacagataagacagtaaaagttctaaacattttggagaagaatattcaggatgggtcc
aaactttctacattgctaaatcataataatgacactgaagaagaagaacgtctgtggaga
gacctaattatggaaagagttacaaaatcggcagatgcttgtcttacagccatcaacatt
atgacatcacctaacatgccaaaagctgtatatattgaggatgtaatagaaagagttata
caatacactaaatttcacttacaaaatactctttatcctcagtatgatcctgtttacaga
gtggatcctcatggcggaggagtattaacctcaaaggcaaaacgtgccaagtgttccact
cacaagcagagagtaatcgtaatgctttataacaaagtttgtgatatcgttagcagcttg
gcagagcttttggagatacaactgctgactgatacaacaattcttcagatatcatcaatg
ggaataacaccattttttgtagaaaatgtcagtgaactccagttatgtgccatcaaatta
gtcactgcagtattctcaaggtatgaaaaacataggcagttgattttggaagaaattttc
acttcacttgcaagattaccaaccagcaagaggagtctaaggaatttcagatctttattg
accgtgactttaacagtgctatgtatattgaatagtagtgatatggatggcgagcctatg
tatattcagatggtgactgctctggttttacaacttattcaatgtgtagtacatctacca
tcagcagagaaagattctaattcagaagaggaatcaaacaaaaaagtggatcaggatgtt
gtcattactaattcttatgagacagctatgcgaacagcacagaatttcctctccatcttc
cttaaaaaatgtgggagtaagcaaggggaagaagattacagaccactctttgaaaatttt
gttcaagatcttctttctacagtcaataagccagaatggccagctgctgaattattactt
agtttgttagggagacttttggttcatcagttcagcaataagtcaacagagatggcttta
agagtggcatctcttgattatcttggaacagtagctgcacgactgagaaaagatgctgtg
acaagcaaaatggatcaaggatctattgcccgaattttaaaacaggttacaggaggggaa
gatgaaattcagcaattgcaaaaggcattgctagattacttggatgaaaataccgagact
gatccttcattagtgttttctcgtaagttttacatagctcaatggtttcgggatacaact
ttggagacagaaaaagcaatgaaatcacagaaagatgaggattcatcagaggggacacat
catgcaaaagaagtcgaaacaactggtcaaattatgcatcgagctgaaagtcggaaaaaa
tttcttcgaagcattattaaaaccacaccttctcagttcagtacattaaaaatgaattct
gataccgtggattatgaagatgcttgcttgattgtgagatacttggcctctatgaggccg
tttgcccagagctttgatatttatttgacacagatactacgagtacttggtgaaaatgca
atagctgttcgaacaaaagccatgaagtgtttatctgaggttgttgctgtagatcccagc
attttagcaaggttggatatgcagcgaggtgtccatggaagattaatggataattccact
agtgtccgtgaggcagcagtagaattattaggtcggtttgtcctctgtcgacctcagctt
gctgaacagtattatgacatgctgattgaaagaatattggatactggtatcagtgtcagg
aaaagagtaataaagattctgagagatatatgtattgaacaaccaacatttcccaaaatc
acagagatgtgtgtgaaaatgatccgcagagtaaatgatgaagagggcattaagaaatta
gtaaatgaaacattccagaaactctggtttactccaactcctcatcatgacaaagaagca
atgaccagaaagattttaaatatcaccgatgtggttgcagcctgtagagatactggatat
gactggtttgaacaacttcttcaaaatcttttgaagtcagaagaagatgcttcatataaa
cctgtgaaaaaagcttgtactcagcttgttgataacttagttgagcatatccttaaatat
gaggaatctctagctgattctgacaataagggagtgaattctggtcgattggtagcttgc
ataaccactttgttcttattcagcaaaatcagaccccagctaatggtcaaacatgccatg
accatgcaaccataccttaccactaaatgtagcacacaaaatgatttcatggtcatttgc
aatgttgcaaaaatcttagaattagtagtgccattgatggagcatccaagtgaaactttc
cttgctaccattgaggaagatttaatgaaacttatcatcaaatatggcatgacagtagtg
caacattgtgtgagctgtcttggggctgttgtaaataaagtcacacaaaattataaattt
gtgtgggcatgtttcaatagatactatggtgcactttcaaaattaaaaattcagcatcaa
gaagactcaaacagcaccatacttacaacaaataaaccagcactgcttagatcccttttt
actgttggagcactgtgtcgccattttgattttgatcaagaagattttaaaggcagcagt
aaggttaacataaaggataaagtacttgaactcctgatgtattttacaaaacattcagat
gaggaagtacaaaccaaagccattattggtctaggatttgcatttattcagcatccaagt
ttaatgtttgagcaagaggtaaagaatctgtataacagcattctagctgataagaacagc
tcagtaaatttaaaaatccaagtgttaaaaaatctccaaacctacctgcaagaagaagat
acacgtatgcaacaggcagataaagactggaagaaagtagcaaaacaggaagatctaaaa
gaaatgggtgatgtgtcctcagggatgagtagttccatcatgcagctttacctcaaacaa
gttcttgaggctttctttcacacccaatcaagtgtgcgtcactttgccctaaatgtgatc
gcattaaccctcaaccagggtctcattcatccagttcagtgtgtgccatatttaattgcc
atgggcacagatcctgagcctgctatgcggaataaagctgaccagcagcttgtggaaata
gacaaaaaatatgctggattcattcatatgaaagctgtggctggtatgaagatgtcttac
caagttcaacaagcaatcaatacatccccaaaagatgccgttaggggtttcagacaagat
gaatcttctagtgctttgtgttcgcatctttactccatgatccgaggaaatcgccaacac
agacgagcctttctaattgctttactcaatctctttgatgacacagcaaaaacagaagtg
aatatgctcttgtatatagcagacaatctagcctgtttcccttaccagacacaggaagaa
ccattgtttataatgcatcatatagatattacactctcagtttctggcagtaacctcctg
cagtcatttaaggagtctatggtgaaagacaagaggaaagagaaaaaaccttcgccaaac
cgggaaagtgcatctggaagtgatagtgaagaagaagtttccaaacctagaaagtcacgt
aaacgagtcgattctgattcagattcagatgaagaagatgacataaatgctgtgatgaaa
tgtttaccagacaattcaagtcctttaattgagtttgcaaatgtttcccagggtatttta
ttacttctgatgttaaaacaacatttaaagaacctttgtggattctctgatagtaaaatt
cagaagtattctccatctgaatctgcaaaagtatatgataaagcgataaaccggaaaaca
ggcatccattttcatcctaaacaaaccttagacttcctgcggagtgatatgtctaattcc
aaaattacagaagatgtgaagaggagtatagttaaacaatatctagatttcaaactcctc
atggaacatttggatcctgatgaagaagaagaagaaggggaggtgtcagctagcacaaat
gcccggaacaaagcaattacctcactgcttggaggaggcagccctaaaaataatgcagct
gagacagaagatgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattg
agaaggtcaaaacgaaattcagactctacagagttggcagcacagatgaatgaaagtgtt
gatgtcatggatgtcatcgctatttgctgtccaaagtacaaagatcgaccacaaattgca
agagtagtacagaaaaccagcaatggcttcagtgttcagtggatggcaggttcctacagt
ggctcctggactgaggctaaacgccgtgatggtcgcaaactggtgccttgggtagacact
attaaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgact
aataaagttgttcagactttacgatcgctgtatgccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system
