Sarcophilus harrisii (Tasmanian devil): 100933281
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Entry
100933281 CDS
T02286
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100933281 (COL14A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shr00535
]
100933281 (COL14A1)
Proteoglycans [BR:
shr00535
]
Extracellular matrix (ECM) proteoglycans
Others
100933281 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
Motif
Other DBs
NCBI-GeneID:
100933281
NCBI-ProteinID:
XP_031803005
Ensembl:
ENSSHAG00000018289
LinkDB
All DBs
Position
1:606459880..606709632
Genome browser
AA seq
1795 aa
AA seq
DB search
MKTFQCKIWFCLLPALGVLVDFSSYVEGQVAPPTRLRYSILSHDSIQISWKAPKGKFSGY
KLLVTPNSGEKTNQLTLQNSANKAIIQGLLPDEEYIVQLIAFDKDKESKPAQGQFRIKDL
EKRKEPKPKVKVVDKGNGSKPSPPAEENKFICKTPAIADIVILVDGSWSIGRFNFRLVRL
FLENLVTAFDVGENKTRIGVAQYSGDPRIEWHLNTFSTKDAVIDAVRNLPYKGGNTLTGL
ALNYIFENSFKPEAGARIGVSKIGILITDGKSQDDIIPPSRTLRDSGVELFAIGVKNADV
AELQEIASEPDSTHVYNVAEFDLMHTVVEGLTKTVCARVEEQEKEIKGSLVTDIGAPTDL
ITSEVTARSFRVTWTPAPGKVEKYRVVYYPTRGGKPEEVVVDGTESTAVLKGLMSLTEYQ
IAVFAIYSTTASEGLRGTEMTLALPMVSDLELYDVTENSLRARWNAVPGASGYLILYAPL
TEGLAGDEKEMKIGETLTDIQLKGLLPNTEYTVTVYAMFGEEASDPVTGQEMTLFLSPPK
NLRISNVGANTARITWDPASKNVNSYLISYAKTSGTETNEVEVDRVSTYSLKGLTALTDY
TVAISSIYEEGQSEPLTGSFTTKQIPAQQYLEVDEESQDSFRVSWKPLSADVARQKLMWI
PVYGGKVEEVVLNEDEDTYIIEGLQPGTEYEVSLLAILSDESETEVLTAVGTTLDAPSTV
STVTTVSPTGPVTSVFRTGIRNLVVDDESTSSLRVKWDISDNRVEHFRVTYLTAKGDHAE
EVIGTVMVPGKQNQLLLKPLLSDTEYKVTVTPIYSDGEGVSVSAPGKTLPLSGPQNLRVS
DEWYNRLRITWDPPSSPPKGYRIVYKPISVPGQALETFVGNDINTILIRNLASGTEYNVK
VFASYPSGFSDALTSEVKTLFLGVTDLEAERIQTNSLCLKWKLHNHATAYRVAIENLKDG
KKQETTMGGGTSSHCFYGLMPDSEHKISVYTQLQEITGPSVSIMEKTRPIPTPPPATTTP
LPTIPPAKEVCKAAKADLVFMVDGSWSIGDDNFNKIIKFLYNTVGALDKIGADGTQVSIV
QFTDDPRTEFKLNTYKTKDTLLDGIKNLSYKGGNTKTGKALKHVRDALFTAEGGTRRGIP
KVIVVITDGRSQDDVNKISKELQLEGISIFAIGVADADYGELLSIGSQPSARHVFFVDDF
DAFKKIEDELITFVCETASATCPLLNKDGNNLAGFKMMELFGLVEKDFSAVDGVSMGPGT
FNVYPCYQLHKDALVSQPTKYLHPEGLPSDYTISFLFRILPDTPQEPFALWEILNKDSDP
LVGVILDNGGKTITYFNYDYQGDFQTVTFEGPEIKKIFYGSFHKLHIVISKTLAKVFIDC
KQVGEKAVNASGNITANGMEVLGRMVRSRGPKENSAPFQLQMFDIVCSTSWANRDKCCEL
PGLRDEENCPALPHSCSCSEISKGASGPAGPPGGPGLRGPKGQRGDQGPKGPDGPRGETG
SPGPQGPPGPQGPSGLSIQGMPGAPGEKGEKGDLGFPGPQGIPGNTGSPGRDGSQGHRGL
PGKDGPTGPPGPPGPIGIPGAPGVPGVTGSTGPQGDLGPPGLPGAKGERGERGDLQSHAM
VRSVARQVCEQLIQSHMARYTSILNQIPSHSSSIRTIPGPPGEPGRQGSPGTPGEPGPPG
RPGFPGNPGQPGTPGERGLSGVKGEKGNPGTGTQGPRGPPGPAGPVGEGRTGSPGPQGSP
GPRGPPGHLGVPGPQGPSGQPGYCDPSSCSSYGVGAPDPDQPEFTPVREDLEDLI
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttttcaatgcaagatctggttttgtttgcttccagctttgggggtacttgtt
gatttttccagctatgttgaaggtcaagtggctccaccaacaagattaagatattccata
ttgtctcatgacagtatacagatctcatggaaagctcccaaaggaaaatttagtggatac
aaacttcttgtaactccaaattcaggtgaaaaaaccaaccaactgactcttcagaacagt
gcaaataaagccatcattcaaggccttttgccagatgaggaatatatagtacaacttatt
gcatttgataaagacaaagaaagtaaacctgctcaaggccaattcagaattaaagatttg
gagaaaagaaaagagcctaaaccaaaggtcaaagttgtagacaagggaaatggaagtaag
ccatctccaccagcagaagaaaacaaatttatatgcaaaacaccagccattgctgatatt
gtgatcctggtagatggttcatggagcattgggagattcaacttcagactggttcgcctt
ttcttggaaaatttggtgacagcttttgacgtgggagaaaataaaactcggataggagtt
gcacaatacagcggtgaccctcggatagaatggcatctgaatacctttagcaccaaggat
gcagtgattgatgctgtccggaatctaccatataagggaggaaacaccttaacaggtctt
gctttaaattacatttttgaaaatagttttaaaccagaagcaggagcaagaattggagta
tccaaaattggcatcttaatcacggatggaaagtctcaagatgatattatccccccatca
agaactctacgtgattctggagttgaactctttgcaattggtgtgaaaaatgcagatgta
gctgaactccaggagattgcttcagaacctgatagtactcatgtctataatgtagcagag
tttgacctgatgcacacagttgtggaaggcctgacaaagacagtttgcgccagagttgaa
gaacaagaaaaggaaatcaaaggctcacttgtgactgacattggagctcctacagattta
atcacttctgaagtcactgccagaagctttagggttacctggactcctgccccaggaaaa
gtggaaaaatatagagttgtttattatcctacaagaggtggaaaaccagaggaggtggta
gttgatggaactgaatcaaccgcagtgctgaagggcttgatgtctttaacggagtatcag
atagcagtttttgcaatatatagtaccactgcaagcgaaggacttcggggaactgagatg
acacttgccctgcccatggtatcggatcttgaactttatgacgtgactgagaacagtcta
agagccagatggaatgcagtgcctggtgcatcaggatacttgatcctctatgctcctctc
actgaaggcctggctggggatgagaaagagatgaaaattggggagaccctcacagatatt
caactaaaaggattgttgccaaatactgaatacacggtgactgtatatgccatgtttgga
gaggaagcaagtgatcctgttacagggcaggagatgacattgtttctaagtccaccaaaa
aacctgagaatttctaatgttggagcaaacactgctagaataacatgggatcctgcttca
aaaaatgtcaacagttacctcatttcatatgccaaaactagtggaactgaaaccaatgag
gttgaagttgatcgtgtttccacatactcactgaaaggcttgacagccctcacagattat
actgttgccatttcctccatctatgaagaagggcagtctgagcctctaacggggagtttt
actacaaagcaaattccagcccaacagtatctggaggttgatgaagaatcacaagacagt
tttagagtgagttggaagcccttgtctgctgatgttgcccggcaaaaattgatgtggatt
cctgtatatggtggaaaagttgaagaggttgtcttaaatgaggatgaagacacatatatt
attgaaggtctacaacctggcacagagtacgaagtttccttgttggctatactcagtgat
gaaagtgagacagaggtgttgactgctgttggaactacacttgatgctccttcaacagta
tctactgttaccactgtatctcccactggcccagtaacttcagttttccgaacaggaatc
agaaacctggttgtagatgatgaatctacttctagccttcgggtaaaatgggacatttca
gacaacagagtggagcatttcagggtgacctatcttactgctaaaggagaccatgctgaa
gaagtgataggaacggttatggtgccaggaaaacagaaccaacttcttctcaagcctctg
ctttcagatactgaatacaaagtcactgtgactcccatctattctgatggagaaggggtc
agtgtatcagcccctggaaaaaccttgccactctctggtccccaaaatttacgtgtctca
gatgaatggtataacagattgcgaattacttgggatcccccatcttcaccaccaaaaggc
tacaggattgtctataaacccattagtgttcccggtcaagcattagagacttttgtgggg
aatgatattaataccattctgattcgaaacctcgccagtggaacagaatacaacgtgaaa
gtgtttgcctcttatccttctggctttagtgatgcactgacaagcgaagtgaagactttg
ttcctgggagtgactgatcttgaagcagaaagaattcaaacaaatagcttgtgcctcaaa
tggaaactgcacaatcatgctactgcttaccgggttgccatagagaatctcaaagatggg
aagaagcaagaaactaccatgggtggaggaacatctagccattgtttctatggacttatg
cctgattcagagcataaaatcagtgtttatacacagctccaagagataacaggacccagt
gtaagcataatggaaaaaacacggccaattccaactcctccaccagcaacaaccacacct
cttccaaccattcctccagcaaaggaagtttgtaaggctgccaaggcagacctagtgttc
atggtagatggatcctggagcattggagatgacaatttcaataagatcattaaatttcta
tataatactgttggtgccctggacaagattggagcggatggaactcaagtatccattgtt
caattcactgatgaccccagaacagaatttaaactaaatacatataaaaccaaagacact
ctccttgatggaattaagaatctttcatacaaaggaggaaatacaaaaacaggaaaagca
cttaagcatgttcgagatgccttgtttactgcggaaggaggaacaagaagaggcataccc
aaggttatagtggtcattactgatgggcgttcacaggatgatgtaaataaaatttccaag
gagttgcagctagaaggcatcagcatttttgcaattggtgtggctgacgcagattatgga
gagctgcttagcattggcagccagcccagcgcaagacatgtcttctttgttgatgatttt
gatgcctttaagaaaattgaagatgagctgattacttttgtctgtgaaaccgcatctgca
acttgccctctgctcaataaggatggcaacaatcttgcaggatttaaaatgatggaattg
tttggtttggttgaaaaggatttttcagcagtggatggggtttctatgggacctggcact
ttcaatgtgtatccatgttaccagctacataaagatgctctggtttcccagcctaccaaa
tatttgcatccagaaggattaccttcagactacaccatctcttttcttttccggatcttg
cctgatactcctcaagaaccatttgctctctgggagattttaaataaggactctgatcca
cttgttggagtcattttagataatggaggcaaaacaattacctacttcaattatgactac
cagggagactttcagactgtaacctttgaagggcctgaaatcaagaaaatattctatggg
agttttcacaagctgcatattgttattagcaagaccttagctaaagtgtttattgactgc
aaacaagtgggtgaaaaagccgtaaatgcatctggcaacattactgccaatggcatggaa
gtcttgggaagaatggtcagatcaagaggaccaaaggaaaactctgctccattccagcta
cagatgtttgacattgtttgttctacttcatgggccaacagagacaaatgctgcgaactc
ccaggactgagggatgaagaaaattgcccagctcttccacattcctgttcctgttctgaa
atcagcaaaggagcttcaggacctgctggcccacctggtggtccaggactccggggacca
aagggtcagagaggtgatcagggtccaaagggaccagatggtcctcgtggtgaaacaggt
tccccaggaccccagggtcctcctggcccacaaggtccaagtggactttccattcaaggc
atgccgggagcaccaggtgaaaaaggagagaagggagatcttggttttccaggcccacag
ggtattccagggaacactggatcaccaggacgtgatggttcacaaggccataggggcctg
cctggtaaagatggacccactggccccccaggaccccctggaccaattggtatccctgga
gccccaggtgttccaggtgtcacaggaagcactggaccacaaggtgacctaggacctcct
ggtcttccaggagcaaagggagaaagaggggaacggggtgatttgcagtctcacgccatg
gttcgttcagtggctcgccaagtgtgtgagcaactcatccagagtcacatggctaggtac
acttcaatcctcaatcagattccgagtcattcctcatccatccggactattccagggcct
cctggtgagccaggaagacaaggttctcctggtacgcctggtgaaccaggaccaccaggc
cggccaggcttcccaggcaacccagggcagccagggaccccaggagaaagaggtttatca
ggtgtcaagggagaaaaaggaaatccaggcactgggactcaaggacccagaggtcctcct
ggacctgcaggacctgtaggtgaaggtcgaactggtagccctgggccacaaggttcacct
ggtcctagaggtccaccgggtcacttaggtgtacctgggccacaggggccttcaggtcaa
cctggctactgtgacccttcttcctgttccagttatggtgttggagcacctgaccctgat
cagccggagttcacacctgttcgagaagatttggaagatctgatctga
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integrated database retrieval system
