Sarcophilus harrisii (Tasmanian devil): 100933296
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Entry
100933296 CDS
T02286
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X3
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04622
RIG-I-like receptor signaling pathway
shr05161
Hepatitis B
shr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100933296 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
100933296 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100933296 (DDX3X)
03041 Spliceosome [BR:
shr03041
]
100933296 (DDX3X)
03036 Chromosome and associated proteins [BR:
shr03036
]
100933296 (DDX3X)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100933296 (DDX3X)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100933296 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
100933296 (DDX3X)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100933296 (DDX3X)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100933296 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100933296
NCBI-ProteinID:
XP_003763499
Ensembl:
ENSSHAG00000007623
UniProt:
G3W048
LinkDB
All DBs
Position
3:complement(251043862..251059049)
Genome browser
AA seq
664 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGGTASKGRYIPPHLRNREASKGFYDKDSSGW
NSGKDKDAYSSFGSRSDARGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRGGFGKFE
RSGNSRWSDKSDEDDWSKPLPPSDRLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYTDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPQKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEEADKRSFLLDLLNATGEDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNDRNANITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVD
WWGN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggagaatgcgctcgggctggatcagcagtttgctggcctagac
ctgaattcttcagataatcagagtggaggaggtacagcgagtaaaggacgttatattcct
cctcatttaaggaacagagaagcttctaagggtttctatgataaagatagttcagggtgg
aattctggtaaagataaggatgcatatagcagttttggctctcgtagtgatgcaagaggg
aagtccagtttcttcagtgatcgtggaagtggatcaagaggaagatttgatgatcgtgga
agaagtgactacgatggcattggcagtcgtggtgacagaggtggctttggcaaatttgaa
cggagtgggaatagtcggtggtctgataaatcagatgaagatgactggtcaaaaccactt
ccaccaagtgatcgcttggagcaggaactcttctctggaggaaacactggaattaacttt
gagaaatatgacgacattcctgttgaggcaacaggcaataattgccccccacatattgaa
agttttagcgatgttgagatgggagaaattatcatgggaaatattgaacttactcgttac
actcgtcctactccagtgcagaaacatgctattcctattatcaaagaaaagagagacttg
atggcttgtgcccaaacaggatctggaaaaactgctgcatttcttctgccaattttgagt
cagatttatacagatggcccaggagaagcattgagggctatgaaggaaaatggaaggtat
gggcgtcgcaaacaatacccaatctccctggttttagcaccaacgagagaattagcagta
cagatctatgaggaagccagaaagttttcatatcgatccagagttcgtccatgcgtagtc
tatggtggtgccgatattggtcagcagattcgagacttagaacgtggatgccacttactt
gtggcaacaccaggacgtctagtagatatgatggaaagaggaaagattggcttagatttt
tgcaagtatctagtgttggatgaagctgatcgtatgctcgatatggggtttgagcctcag
attcgtcgtattgttgagcaagatactatgccacaaaagggagttcgccacactatgatg
tttagtgctactttccccaaggaaatacagatgcttgctcgtgacttcttggatgaatat
atctttctggctgtaggcagagttggctctacttctgagaacatcacacagaaagtagtg
tgggtggaagaagcagacaaacggtcatttctgcttgacctcctaaatgccacaggcgaa
gattcactgaccttagtgtttgtggagaccaaaaagggggcagattccttagaagatttc
ttataccatgaaggatatgcttgtaccagtatccacggagaccgatctcagagagatcga
gaagaagcacttcaccagttccgctcaggaaaaagcccaattttagtagctacagcagta
gctgcaagaggactggatatttcaaatgtgaaacatgtcataaactttgatttgccgagt
gatattgaagaatatgtacatcgaattggtcgtacaggtcgtgttgggaaccttggtctt
gccacttcattcttcaatgataggaatgccaatatcaccaaggatttgctggatcttctt
gttgaagctaaacaagaagtgccatcatggctagaaaatatggcttatgaacatcactat
aagggtagcagtcgtggacgttctaagagtagtagattcagtggaggttttggtgccaga
gactatcgacaaagtagtggtgccagcagttctagctttagtagtagtcgagcaagcagc
agccgcagtggtggcggaggtggtggtcatggtagtagcagaggatttggtggaggtggc
tatggaggcttctacaacagtgatggatatggaggaaattataactcccagggggttgac
tggtggggaaattga
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