Sarcophilus harrisii (Tasmanian devil): 100933441
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Entry
100933441 CDS
T02286
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04140
Autophagy - animal
shr04148
Efferocytosis
shr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100933441 (VPS18)
04148 Efferocytosis
100933441 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100933441 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100933441 (VPS18)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100933441 (VPS18)
Hops complex
100933441 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-RING_16
zf-C3HC4_2
Vps39_2
KNOX2
zf-C3H2C3
zf-RING_2
zf-ANAPC11
zf-rbx1
Peptidase_M7
Motif
Other DBs
NCBI-GeneID:
100933441
NCBI-ProteinID:
XP_023356317
LinkDB
All DBs
Position
2:262068839..262074652
Genome browser
AA seq
972 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCASVGIPHSGFVNVPLEKEAPIFTKQRIDFTPSDRITNL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDEAKVHKMFLDHTGSHLLIALSSTE
VLYINRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLMEEGGPAPVCSIEPERGPDGRYFVIATTRQRLFQFTGRVAEGAE
VQGFSGLFATYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWDYPPGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAHTERAVFRYHVQRESRDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYVESARCYALTQSYFEEIALKFLEVRQEEALAEFLQRKLAGL
KPSERTQATLLTAWLTELYLSRLGALQGDADSLPLYRETRERFRDFLSSPRNKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLSRHHDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQAASLLAYLEQAGTSPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
EFYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVKTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLQAYNRHIDELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCSACDFPLLNRPFYVFLCSHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPTKGPPRTKEGEGGTAGAPSREQLKADLDELVAAECVYCGELMIRSIDRPFID
PQRYEEEHQSWL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactcgctctcgcgctcggcggtcctgcagccg
ggctgcgccagcgtgggcatcccccactcggggtttgtgaatgtccccctggagaaggaa
gcacccatctttaccaagcagcgaattgactttactccctctgaccgtatcactaacctt
gtagtctcctgcaatcaactctgcatgagtctggggaaggacaccctactccgcattgat
ctgggaaaggcaaatgaacccaatcacgtggagttgggacgcaaagatgaagctaaagtt
cataagatgtttctggatcacactggttcacacctcttgattgccctgagcagtactgag
gtcctctacataaaccgcaacggacaaaaggttcggccactggcacgatggaaggggcaa
ctggtggaaagtgtgggctggaacaaggccctgggtacagagagcagcactggacccatc
ctagtgggtacagcccagggccagatctttgaagctgaactgtcagccagtgaaggtggc
ctttttggtcctgcacctgatctgtattttcgcccactttatgtactgatggaggaggga
ggcccagcacctgtgtgctctatagagccagaacgtggtcctgatggacgctattttgtc
attgccactactcgccagcgcctcttccagttcacaggccgtgtggcagagggggctgag
gtgcagggtttttcagggctgtttgctacctatactgaccacccaccacctttccgagaa
ttccccagcagtttgggttatagtgagttggctttctatactcccaagttgcgttctgca
ccccgtgcttttgcctggatgatgggggatggtgtgctgtatggagcactggactgcggg
cgtcctgattctttgctgagtgaggaacgtgtatgggattatccacctggtgtgggccca
ggagccagcccacccctggctatcgtcttgacccagttccacttcttattgctcctagca
gaccgagtagaagcagtgtgcacactaacagggcaggtggtattacgagatcactttcta
gaaaaatttgggccactacgacatatggtgaaagactcctccacaggccacttgtgggct
cacactgagcgggctgtgttccgttatcacgtgcagcgggagtctcgggatgtttggcgc
acctatctggatatgaaccgttttgacctggctaaggagtattgccgtgagcgccctgac
tgcctagacacagttctggcccgggaggctgacttttgtttccgccagcgccgctatgta
gagagtgctcgatgctatgccctgacccaaagctactttgaagagattgccctcaagttc
ctggaagttcgacaggaggaggctttggcagaattcttgcagcggaaattggcagggcta
aagccaagtgagcgcactcaggccacactgctcactgcctggctgacagaactctacttg
agccggcttggagcacttcagggtgatgcagattctttgcctctttatcgggaaacacga
gagcgattcagagactttctcagtagcccacgcaacaaagaatggctctttgccagccga
gcctcaatccatgagttgctggccagccacggggacacagaacacatggtgtattttgct
gtgatcatgcaggactatgagcgggtagtagcatatcactgtcagcacgaagcctatgag
gaggctttggctgtgctctcccggcaccatgatccccagctcttttataagttttcaccc
attctcattcgtcatattcctcgacagctggtggatgcttggattgaactgggcagccgc
ctggatgcccggcagctcatcccagccttggtgaactacagccaaggtggggaagcccaa
caagtgagccaggccatccgttacatggaattctgtgtgaatgtgctaggagagactgag
caagcaattcacaactacctgctctcgttgtatgcaagaggtcaagctgcctcattgctt
gcttacctggagcaggcagggaccagtccccaccgggtgcactatgacctcaaatatgcc
ctgcgactctgtgctgagcacggccatcaccgagcctgtgttcacgtctacaaggtgttg
gagttttatgaagaggccgttgacttggctctccaggtggatgtagacctggctaaacag
tgtgcagatctgccagaagaagatgaggagttacgtaagaaactctggctgaagatcgcc
cggcatgtggtacaagaggaagaagatgtaaagactgccatggcctgtctggccagttgt
cctcttctcaaaatagaggatgtgctgcctttctttcctgactttgtcactattgaccac
tttaaggaggccatctgcagctccctgcaggcctacaaccggcacattgatgagctccag
cgggagatggaggaagctacagctagtgcccagcggatccggcgagacctgcaggagctt
cgtgggcgctatggcacggtggagcctcaagacaagtgctctgcctgcgacttccccctg
ctcaatcgtcctttctatgtgtttctttgcagtcacatgttccatgctgactgccttctg
caggccgtgaggcctggtctccctgcctacaagcaagctcgcctcgaggagctgcagcga
aagctaggggctgcaccacctcccaccaaaggcccaccccgcacaaaagagggagaagga
gggactgcaggggcacccagccgggaacagctgaaagccgacctggatgagctagtggca
gccgaatgtgtctactgcggggagctgatgatccgttccattgaccggcctttcattgac
ccccagcgatatgaagaagaacaccaaagctggctttag
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