Sarcophilus harrisii (Tasmanian devil): 100933709
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Entry
100933709 CDS
T02286
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04140
Autophagy - animal
shr04211
Longevity regulating pathway
shr05010
Alzheimer disease
shr05014
Amyotrophic lateral sclerosis
shr05016
Huntington disease
shr05017
Spinocerebellar ataxia
shr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100933709 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100933709 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100933709 (RB1CC1)
05014 Amyotrophic lateral sclerosis
100933709 (RB1CC1)
05016 Huntington disease
100933709 (RB1CC1)
05017 Spinocerebellar ataxia
100933709 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
100933709 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shr01009
]
100933709 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100933709 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
shr03029
]
100933709 (RB1CC1)
Protein phosphatases and associated proteins [BR:
shr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100933709 (RB1CC1)
Membrane trafficking [BR:
shr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100933709 (RB1CC1)
Mitochondrial biogenesis [BR:
shr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100933709 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Jag_N
Motif
Other DBs
NCBI-GeneID:
100933709
NCBI-ProteinID:
XP_031802262
Ensembl:
ENSSHAG00000008684
UniProt:
G3W3N6
LinkDB
All DBs
Position
1:469873799..469939299
Genome browser
AA seq
1595 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQSKYKIAIHQQVLVVNGGECMASDRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSAENDMELKVEESLMMPAVFHTVASRTQ
LAVEMHEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTLSYQKLLSKFESAYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSSPEHEEKEMENNETEKSS
ELVLYPDMPRMTNKSLLASYCKSVEQSAPDNTDPESGKEIRESCQSTIQEEEISVEHKES
DLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPRFIQPFLVECRQTVAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQ
LMIMLNNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADKEGEKLQALLRLVTEL
LERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAEKSKRESFG
KLFRKSFLRNRLFRGLDSWPPSFCTRKPRKFDGELPDISLTDLKFLQSFCPSEVQPLLRV
PLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSVTTPRMEST
TGITTTTSPRTPPPLNIQDPPCPPVCPLEELSPDSIDAHTFDFETIPHPNIEQTLHQESL
DLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPQSPEMMVESLYSSVINAIDSRRMQD
TNICGKEDAGDHSSLNVQMEKCRAVAQESQFNLQNIKEDLCHFRTLVHKEQCDFSNSLKC
TAVEIRNIIEKVKCSLEITLNEKHQKELQSLKNEYEAKLDALISDSEENEKKIKKLKGDL
VGLEEVLQNKDNEFALVKNEKEAVLCLQNEKDQKLLEMEHAMKNQNFEIKELKQSREIVL
EDLKKLHVENEERLHLLRAELQSLEQSHLKELEDTLQDKHTQEFEKVLNDHKVSLEKLKK
ENQQRLDQIQESHAIVVQEKEQQLQDLKVKVSDLSDLRCKLEVELALKEAETDEMKILLE
ESKAQQQETLKILIEKETENLKSEISKLNQKILDNNEDYQIGLAELKTLMTVEKDQCISE
LVSRHEEESNLMRTELNKVTSLHQQGFEIETKLKEQVMELQSKLELQSSILEKQNNERMT
QQQEKYEAIIHKLEEDKEKIIMSQGEDREQLIQKLNCEKEEAVQVALKEFELQRDTVEKE
LLQKIKHLESQITKSPPIEYTSEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQN
VRTSLIAEQQTNFNTVLTREKMKKENIINDLSDKLKNTMQQQERDKDLIESLSEDRARLL
EEKKKLEEEVNKLRSSSFVPPPYLATAPELCGACAPELPGETDRLASEMADEGRTDSAME
TSMMSVHENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIR
DFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLTALDLKPGECASGTSRRPWVLGKV
MEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttttggtcaacactggaactactctaacatttgatactgaactt
gcagtgcaaactgtggcagaccttaaacatgcaattcaaagcaaatataagattgcaatt
caccagcaggtactggtagtaaatggaggagaatgtatggcctcagatcgaagagtatgc
acttacagtgctggaacagacacaaatccaatttttctgtttaataaagaaatgatctta
tgtgatcgtcctcctgctattcccaaaacaacattttcagcagaaaatgacatggaatta
aaagttgaagagtctcttatgatgcctgcagttttccatacggtagcttcaagaacacag
cttgctgtggaaatgcatgaggttgccaagaaactttgttccttttgtgaaggtctagtc
catgatgaacacctgcaacatcaaggctgggctgcaataatggccaatttagaggattgt
acattatcctaccaaaaactgctttccaagtttgaaagtgcttattcaaattatctacag
tccgtagaagatatcaagttgaagcttacacatttaggaactgcggtttcagtaatggcc
aagattccacttttggagtgcctaacaagacatagctacagggaatgtttgggaagactt
gattcttctcctgaacatgaagaaaaagaaatggagaacaatgaaactgaaaaatcatca
gaattggtgctttatcctgatatgcctcggatgactaacaaatcattgttagcctcatat
tgcaagtcagtggaacagtcagccccggacaacacagatcctgaaagtggcaaagaaatt
agggaatcttgtcagagcactatccaggaggaagaaatttcagtagaacataaagagagt
gatttgccttctttcaatgtttccttattagactggataaatgttcaagatagacctaat
gatgtggaatctttggttaggaagtgctttgattctatgaacaggcttgatccaagattc
attcagccctttttggtagagtgtcgacaaactgttgccaaactggataatcagaacatg
aaagccattaaaggacttgaagacaggctttatgcactggaccagatgatagctagctgc
agccgattggtaaatgaacaaaaagaacttgctcagggatttttagctaatcagaagaga
gctgaaaacttgaaagatacttctgtgctacctgatttgtgcctgagtcatgcaaatcag
ttgatgattatgttgaataatcatagaaaactgttggatattaaacagaaatgtaccact
gccaaacaagaacttgcaaataatctacaagtcagattgaagtggtgttgctttgttatg
cttcatgctgacaaagaaggagagaagctacaagctttgctccgccttgtaacagagctg
ctagaacgggtcaagattgtagaagctcttagtacagtaccacagatgtactgcttagct
gttgttgaagttgtaagaagaaaaatgttcataaaacactacagggagtgggctggtgct
ttaatcaatgatggaaagcatttatatgaagctgaaaagtcaaaaagggaatcttttgga
aaattgtttaggaaatcttttttaagaaatcgtctgtttaggggacttgactcctggcct
ccttctttttgtactcgaaagcctcgtaagtttgatggtgaacttccagacatttcttta
actgatttgaagtttctgcagtctttctgtccttcagaagtacaaccattactcagggtt
ccattactttgtgattttgaacctctacaccagcatgtactcgcgctacataatttagtg
aaagcagcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaa
aaggcttccatgagtcagacatccccacaatcagttactaccccaaggatggaaagtaca
acaggaattacaactactacctcacctagaactcctcctccacttaatattcaggatccc
ccatgtcctccagtgtgtccattagaagaattgtctccagatagcattgacgctcataca
tttgattttgagacaattcctcacccaaatattgaacaaacccttcatcaagaatcttta
gatttagactctttagctgaaagccctgaatctgattttatgtcagcagtgaatgaattt
gtaatagaagaaaatcttacatctcctaatcccataagtgatccacaaagtccagaaatg
atggtagaatcactctattcttcagtcatcaatgcaatagacagcagacgcatgcaggat
acaaacatatgtggtaaagaagatgcaggagaccattcttctctaaatgttcaaatggaa
aaatgtagagctgttgcccaagaatcacagtttaatttacaaaacataaaagaagatctc
tgtcacttcagaacacttgtgcataaagaacagtgtgatttctctaattctttaaaatgt
acagctgtagaaatacgaaatatcattgaaaaagtaaaatgttctctggaaataacacta
aatgaaaaacatcagaaagaactgcagtctttaaaaaatgaatatgaagctaaactcgat
gcattaataagtgatagtgaagaaaatgaaaaaaagattaaaaaattaaaaggagattta
gtaggtcttgaagaggttttacaaaataaagataatgagtttgctttggttaagaatgaa
aaagaagctgttctttgcctgcagaatgaaaaagatcagaaactgttagagatggaacat
gcaatgaagaaccaaaattttgaaattaaagaactgaagcagtcacgagaaattgtgttg
gaagacttaaaaaagctccatgttgagaatgaagaaagattacatctccttagggcagaa
cttcagagtttggaacagagtcacctgaaagaattagaagatactcttcaagacaagcac
acacaggaatttgaaaaagttttgaatgaccacaaggtttctttagagaaattaaaaaag
gaaaatcaacaaaggcttgatcagatacaagaatcccatgcaatagttgtccaagaaaag
gaacaacagttgcaggatttaaaagttaaagtttctgatttgtctgacctgaggtgcaag
ttagaagttgagcttgctttgaaagaagcagaaactgatgaaatgaaaatattattagaa
gaaagcaaagcccaacagcaagaaactttaaaaatcctcattgaaaaagaaacagaaaat
ttgaaatcagagataagtaagttaaaccagaagattctagataataatgaggactaccaa
ataggtttagcagagctgaaaactctaatgactgttgaaaaagatcagtgcatttcagag
ttagtcagtagacatgaagaggaatcaaatttaatgagaactgaactaaataaggtaaca
tctttacatcagcaaggttttgaaattgaaactaaattgaaagaacaagtaatggaattg
cagagtaagttggagttgcaatcgagtattcttgaaaagcaaaacaatgaaagaatgacc
caacaacaagaaaaatatgaagctatcatccacaaacttgaagaagacaaagaaaaaata
attatgagtcaaggagaagacagagaacaactcattcagaagcttaattgtgaaaaagag
gaagctgttcaagttgcccttaaagaatttgaattgcagagagatactgttgaaaaagaa
ctattgcaaaaaattaaacatcttgagagtcaaataaccaaaagtcctcccattgagtat
accagtgaagattcatcaagtttagttgctgaacttcaagaaaaacttcaggaagaaaag
gccaagtttttagaacaacttgaagaacaagaaaaaagaaagaatgaagaaatgcaaaat
gttagaacatctttgattgcagaacaacagacaaattttaacactgttctaacaagagaa
aaaatgaagaaagaaaatataataaatgatcttagtgacaaattgaaaaatacaatgcaa
caacaagaacgagataaagatttaattgaatccctttctgaagatcgagctcgtttgctt
gaggagaagaaaaaacttgaagaagaagtaaataaattgcgtagtagcagttttgttcct
ccaccatatttagcaacagcccctgaactttgtggtgcttgtgcacctgaactccctggt
gaaacagacagattagcctcagaaatggcagatgaaggaagaactgattcagcaatggaa
acaagcatgatgtctgtacatgaaaatattcacatgttgtctgaagaaaaacaaaggata
atgctgttagaaagaactttgcagttaaaagaagaagaaaacaagcggttaaatcagaga
ctaatgtctcaaagcatgtcttcagtttcttcaaggcattctgaaaaaatagctattaga
gattttcaggttggagatttggttctcattatcttggatgaacgtcatgacaattatgta
ttatttactgttagcccaactttatacttcctgcattcagagtctcttactgcattggac
ctcaaaccaggtgagtgtgcttcaggtacatctagaagaccgtgggtacttggaaaagta
atggaaaaggaatattgtcaagccaaaaaggcacaaaacagatttaaagttcctttgggt
accaaattttacagagttaaagctgtgccgtggaacaagaaagtttaa
DBGET
integrated database retrieval system
