Sarcophilus harrisii (Tasmanian devil): 100933719
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Entry
100933719 CDS
T02286
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100933719 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100933719 (U2AF1)
Spliceosome [BR:
shr03041
]
Complex A
U2 snRNP components
U2 related factors
100933719 (U2AF1)
Complex B
100933719 (U2AF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
100933719
NCBI-ProteinID:
XP_003763431
Ensembl:
ENSSHAG00000017185
UniProt:
G3WXV7
LinkDB
All DBs
Position
3:234713150..234733598
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AA seq
248 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGGGGGGGGGRERDRRRSR
DRERSGRF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatttggcctccattttcggcacagaaaaagacaaagtcaactgttcattt
tacttcaaaattggagcctgtcgtcatggagacagatgttcaaggttgcataataagcca
acctttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgcagtgagtgatgtcgaaatgcaagagcactatgatgaa
ttctttgaggaggtttttacagaaatggaagaaaaatatggtgaagttgaggagatgaat
gtttgtgataaccttggggatcatcttgtaggaaatgtctatgtaaagtttcgccgtgaa
gaagatgcagaaaaggctgtcattgacttaaacaatcgctggtttaatggacagccaatt
catgcagagctttcacctgtgactgatttcagagaagcttgctgtcgccaatatgaaatg
ggagaatgtactcgaggaggcttctgtaactttatgcatctgaaacctatctctagggaa
ctacgacgagagttatatgggcgtcgtcgtaagaagcataggtcccgatcaagatctcgt
gaacgtcgttctcgatcgagagatcgtggccgtggtggtggcggcggcggcggcggtggt
ggcggtggcggcggtggtggtggtggaggaggaagggaacgtgataggaggcggtcaaga
gatcgtgaaagatctggtcgattctga
DBGET
integrated database retrieval system
