Sarcophilus harrisii (Tasmanian devil): 100933827
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Entry
100933827 CDS
T02286
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360
Axon guidance
shr04724
Glutamatergic synapse
shr04726
Serotonergic synapse
shr04929
GnRH secretion
shr04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100933827 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
100933827 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
100933827 (TRPC1)
04726 Serotonergic synapse
100933827 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
100933827 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100933827 (TRPC1)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100933827 (TRPC1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
Dsc3_C
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
100933827
NCBI-ProteinID:
XP_031813674
Ensembl:
ENSSHAG00000015224
UniProt:
G3WR79
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Position
3:complement(50053228..50118631)
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AA seq
898 aa
AA seq
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MGLEMGMGREGRPAPGRACAFPSPAGGCGGRSPVSGALAARALTPVAPEQPRHEGTVEAS
QLLSSHGAEWGSGLGPEEVPPPSPSPSPSPSPSPSRSPSPSLPPGSPLSWAAIMAALYQS
SDLSGSSESSSPTRLLALKDVREVKEDTTLDEKLFLLACDKGDYYMVKKLLEENSAGDMN
INCVDVLGRNAVTITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNHRPKR
SSRPSIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECT
LCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRN
DYEELAQQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKY
NQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGIFWPVLSLCYLIAPKSQV
GRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLIIWLIGMVW
SDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDSADRKDWDAFHPTL
VAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLT
QLYDKGYTGPQEQKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGE
ELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDK
CTLPPPFNIIPSPKTICYLLSSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVM
CCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggggctggagatgggcatgggcagggaggggcgtccggccccgggccgcgcatgcgct
ttcccatccccagctggcgggtgtgggggacgatcgcctgtcagtggagctctggcagct
cgtgcactgacgccggtggctccggagcagccgcgccacgaggggaccgtggaagcttct
cagcttctctccagccacggggcggagtgggggtcggggctggggccggaggaagtcccc
cctccgtccccgtccccttccccgtccccgtccccgtccccgtcccggtctccgtcccct
tccctaccccctggatcccccctttcatgggccgccatcatggcggctctgtaccagagc
tcggacctctcgggctcctccgagtcctcctccccgaccaggctcctggctctgaaggac
gtgcgggaggtgaaggaggacaccacactagatgagaagctcttcctgctggcctgcgac
aagggtgactattatatggttaaaaagctcttggaagaaaacagtgcaggtgacatgaac
ataaattgcgtagatgtgcttggaaggaatgctgttaccataactattgaaaatgaaaac
ttggatattctacaacttcttttggactacggttgtcagtccacagatgcacttttggtg
gctatcgactctgaagtagtgggagctgttgatatcctacttaatcatcgaccaaaacga
tcatcaagaccaagtatagtaaaactaatggagcgaattcagaaccctgagtattcaaca
actatggatgttgctccagtcattttagctgctcatcgtaacaactatgaaattcttaca
atgcttttaaaacaggatgtatctctacccaaaccccatgcagtgggttgtgaatgcaca
ctatgctctgcaaaaaacaagaaggacagtctaagacattccaggtttcgacttgatatc
tatcgttgtttagccagtccagccctaatcatgttaacagaagaagatccaattttaaga
gcatttgaacttagtgcagacttaaaagagctaagtcttgtggaggtggaattcaggaat
gattatgaagaactagctcagcaatgcaaaatgtttgccaaagatttgcttgcccaggca
cggaattcacgggagctagaagtcatcctaaatcatacatctagtgatgagcctttggat
aaacggggacttttagaagaaagaatgaatttaagtcgtttaaaacttgctatcaaatat
aaccaaaaagagtttgtttctcaatctaactgtcagcagttcctcaatacggtttggttt
ggacaaatggcaggttaccggcgtaaacacacctgtaagaagattttgacagttctgaca
gttggcatcttttggccagtcttatcactctgttatttaatagctcccaaatctcaagtt
ggtcgaatcatccacaccccttttatgaaatttattattcatggagcttcatattttaca
ttcttgttgttgcttaatttgtactccctggtctacaatgaggataagaaaaacaccatg
ggaccagcccttgaaaggattgattatcttcttattatatggctgattggaatggtgtgg
tcagatgttaaaagactctggtatgatggattggaagactttttagaagaatctcgtaat
caactcagttttgtcatgaattccctttatttggcaacctttgccctcaaagttgttgct
cataacaagtttcacgattctgctgatcgaaaggattgggacgcatttcatcctacatta
gtggcagaaggtctttttgcttttgctaatgttctgagttacctccgcctcttttttatg
tatacgacaagctccatcttggggccattacagatttcaatggggcaaatgttgcaagac
tttggaaaatttcttgggatgtttctcctcgtcttgttttccttcacaattggactgacc
caactatatgacaaaggctatacaggtcctcaagaacagaaggactgtgctggaatcttc
tgtgaacagcaaagcaatgacacattccattcgtttattggcacttgctttgctttgttt
tggtatattttttctttagcacatgtagcaatctttgtcacaagatttagctacggtgaa
gaattacagtcttttgttggagctgttattgttggcacatacaatgtcgtggttgttatc
gttcttaccaaattattagttgccatgcttcataaaagctttcagctgatagcaaaccat
gaagacaaagaatggaaatttgcccgtgctaagttgtggcttagctactttgatgacaaa
tgtacactacctccgcctttcaatattattccttctcccaagaccatttgctatctacta
agtagtctcagtaagtggatttgctctcatacatcaaagggcaaagtcaagcggcaaaac
agtttaaaggaatggagaaacctgaaacaaaaaagagatgaaaactaccaaaaagtgatg
tgttgcttagtccaccgttatttaacttccatgagacagaagatgcaaagcacagatcaa
gcaactgtagaaaatctcaatgaattacgccaagatctatcaaaattccgaaatgaaata
agggacttacttggctttcggacttctaaatatgctatgttttacccaagaaattaa
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