KEGG   Sarcophilus harrisii (Tasmanian devil): 100933827
Entry
100933827         CDS       T02286                                 
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
  KO
K04964  transient receptor potential cation channel subfamily C member 1
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360  Axon guidance
shr04724  Glutamatergic synapse
shr04726  Serotonergic synapse
shr04929  GnRH secretion
shr04972  Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:shr00001]
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    100933827 (TRPC1)
  09154 Digestive system
   04972 Pancreatic secretion
    100933827 (TRPC1)
  09156 Nervous system
   04724 Glutamatergic synapse
    100933827 (TRPC1)
   04726 Serotonergic synapse
    100933827 (TRPC1)
  09158 Development and regeneration
   04360 Axon guidance
    100933827 (TRPC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:shr04040]
    100933827 (TRPC1)
Ion channels [BR:shr04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   100933827 (TRPC1)
SSDB
Motif
Pfam: TRP_2 Ion_trans Ank_2 Ank_4 LHD_TRPY1 Dsc3_C MTR4-like_stalk RIN1
Other DBs
NCBI-GeneID: 100933827
NCBI-ProteinID: XP_031813674
Ensembl: ENSSHAG00000015224
UniProt: G3WR79
LinkDB
Position
3:complement(50053228..50118631)
AA seq 898 aa
MGLEMGMGREGRPAPGRACAFPSPAGGCGGRSPVSGALAARALTPVAPEQPRHEGTVEAS
QLLSSHGAEWGSGLGPEEVPPPSPSPSPSPSPSPSRSPSPSLPPGSPLSWAAIMAALYQS
SDLSGSSESSSPTRLLALKDVREVKEDTTLDEKLFLLACDKGDYYMVKKLLEENSAGDMN
INCVDVLGRNAVTITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNHRPKR
SSRPSIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECT
LCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRN
DYEELAQQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKY
NQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGIFWPVLSLCYLIAPKSQV
GRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLIIWLIGMVW
SDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDSADRKDWDAFHPTL
VAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLT
QLYDKGYTGPQEQKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGE
ELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDK
CTLPPPFNIIPSPKTICYLLSSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVM
CCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggggctggagatgggcatgggcagggaggggcgtccggccccgggccgcgcatgcgct
ttcccatccccagctggcgggtgtgggggacgatcgcctgtcagtggagctctggcagct
cgtgcactgacgccggtggctccggagcagccgcgccacgaggggaccgtggaagcttct
cagcttctctccagccacggggcggagtgggggtcggggctggggccggaggaagtcccc
cctccgtccccgtccccttccccgtccccgtccccgtccccgtcccggtctccgtcccct
tccctaccccctggatcccccctttcatgggccgccatcatggcggctctgtaccagagc
tcggacctctcgggctcctccgagtcctcctccccgaccaggctcctggctctgaaggac
gtgcgggaggtgaaggaggacaccacactagatgagaagctcttcctgctggcctgcgac
aagggtgactattatatggttaaaaagctcttggaagaaaacagtgcaggtgacatgaac
ataaattgcgtagatgtgcttggaaggaatgctgttaccataactattgaaaatgaaaac
ttggatattctacaacttcttttggactacggttgtcagtccacagatgcacttttggtg
gctatcgactctgaagtagtgggagctgttgatatcctacttaatcatcgaccaaaacga
tcatcaagaccaagtatagtaaaactaatggagcgaattcagaaccctgagtattcaaca
actatggatgttgctccagtcattttagctgctcatcgtaacaactatgaaattcttaca
atgcttttaaaacaggatgtatctctacccaaaccccatgcagtgggttgtgaatgcaca
ctatgctctgcaaaaaacaagaaggacagtctaagacattccaggtttcgacttgatatc
tatcgttgtttagccagtccagccctaatcatgttaacagaagaagatccaattttaaga
gcatttgaacttagtgcagacttaaaagagctaagtcttgtggaggtggaattcaggaat
gattatgaagaactagctcagcaatgcaaaatgtttgccaaagatttgcttgcccaggca
cggaattcacgggagctagaagtcatcctaaatcatacatctagtgatgagcctttggat
aaacggggacttttagaagaaagaatgaatttaagtcgtttaaaacttgctatcaaatat
aaccaaaaagagtttgtttctcaatctaactgtcagcagttcctcaatacggtttggttt
ggacaaatggcaggttaccggcgtaaacacacctgtaagaagattttgacagttctgaca
gttggcatcttttggccagtcttatcactctgttatttaatagctcccaaatctcaagtt
ggtcgaatcatccacaccccttttatgaaatttattattcatggagcttcatattttaca
ttcttgttgttgcttaatttgtactccctggtctacaatgaggataagaaaaacaccatg
ggaccagcccttgaaaggattgattatcttcttattatatggctgattggaatggtgtgg
tcagatgttaaaagactctggtatgatggattggaagactttttagaagaatctcgtaat
caactcagttttgtcatgaattccctttatttggcaacctttgccctcaaagttgttgct
cataacaagtttcacgattctgctgatcgaaaggattgggacgcatttcatcctacatta
gtggcagaaggtctttttgcttttgctaatgttctgagttacctccgcctcttttttatg
tatacgacaagctccatcttggggccattacagatttcaatggggcaaatgttgcaagac
tttggaaaatttcttgggatgtttctcctcgtcttgttttccttcacaattggactgacc
caactatatgacaaaggctatacaggtcctcaagaacagaaggactgtgctggaatcttc
tgtgaacagcaaagcaatgacacattccattcgtttattggcacttgctttgctttgttt
tggtatattttttctttagcacatgtagcaatctttgtcacaagatttagctacggtgaa
gaattacagtcttttgttggagctgttattgttggcacatacaatgtcgtggttgttatc
gttcttaccaaattattagttgccatgcttcataaaagctttcagctgatagcaaaccat
gaagacaaagaatggaaatttgcccgtgctaagttgtggcttagctactttgatgacaaa
tgtacactacctccgcctttcaatattattccttctcccaagaccatttgctatctacta
agtagtctcagtaagtggatttgctctcatacatcaaagggcaaagtcaagcggcaaaac
agtttaaaggaatggagaaacctgaaacaaaaaagagatgaaaactaccaaaaagtgatg
tgttgcttagtccaccgttatttaacttccatgagacagaagatgcaaagcacagatcaa
gcaactgtagaaaatctcaatgaattacgccaagatctatcaaaattccgaaatgaaata
agggacttacttggctttcggacttctaaatatgctatgttttacccaagaaattaa

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