Sarcophilus harrisii (Tasmanian devil): 100933882
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Entry
100933882 CDS
T02286
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03008
Ribosome biogenesis in eukaryotes
shr05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100933882 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100933882 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100933882 (DROSHA)
03009 Ribosome biogenesis [BR:
shr03009
]
100933882 (DROSHA)
03036 Chromosome and associated proteins [BR:
shr03036
]
100933882 (DROSHA)
Enzymes [BR:
shr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
100933882 (DROSHA)
Messenger RNA biogenesis [BR:
shr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
100933882 (DROSHA)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
90S particles
RNase
100933882 (DROSHA)
Prokaryotic type
rRNA processing factors
100933882 (DROSHA)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
100933882 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
YcaO
Motif
Other DBs
NCBI-GeneID:
100933882
NCBI-ProteinID:
XP_012396673
Ensembl:
ENSSHAG00000015198
UniProt:
A0A7N4V7S3
LinkDB
All DBs
Position
1:complement(424745675..424855470)
Genome browser
AA seq
1457 aa
AA seq
DB search
MLLSQFQRESGAHARTAELPRAPQSCPLHPGFLFRRCGLLCRSFGPRGSSLFYLLAAAAV
AATSLCGAPSFVFRRSASLGASCSQRMSFHSGRGNSRGRGGSGGRASTQTFRPQNLRQLH
PQQPTGQYQYEQPVVPPTTFTSPPTASYLPPRPDFVPYPPPVPPTAQTPVTQCPLRPPLP
NHQVRPTFPVPPCFPPVPPPVPTPTNTSVPGTPATQTTFPYMMPPPSLPPPPPVIPPQVN
YPSVYPTTYSQQSFPPPNFSSYQNNSSSFQTSSNNNNSSHFRHPTQYQVEKPSSERRSPE
RSKHYDDHRHREHSHGHGDRHRSDSHGDRRDRTRSPDRRRQESSRHRSDYDRGRTPPRHR
SYEHSRERERDRDRDRHRHRESRRSPSPDRSYKKEYKRTSSRSPSREKKRTRWEDDRDRW
LDNQNSGKEKSYTSIKDKEPEDIMPDKNEEEEEDLLKPVWIRCTHSESYYSNDPMDQVGD
STVVGTSRLRDLYEKFEEELGKRQAKAKAVRPPWEPPKTKLDEDLDSSSESDCDSDDDSS
CSSSSDSDVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIY
PGEEPIKPCRPMTNNAGRLYHYRITVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPL
TNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLYLFRDILELYDWNLTGPSFENN
SSCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCNKALVPEEEIANMLQWEELEWQK
YAEECKGMIVNNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQK
LWKSYVKLRHLLANSPKVKQADKQKLAQREEALQKIRQKNTMRREVTVELSSQGFWKTGI
RSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDH
ARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSSHRLNPNSSKPS
HKCVPLSARKIRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHL
AMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLF
NDKDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFT
LRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAK
VAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRL
KEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERI
GCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEKEPDET
DEVVTPYIQVKREELSP
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgctcctttcccagtttcagagggaatctggggcgcatgcgcgtaccgcagagctgcct
cgcgcgccgcaatcctgccctttacaccctggcttcctgttccggaggtgcggactgctc
tgccgcagcttcggccctcggggctcctccctgttttacctcctggcggcggctgcagtg
gcggcgactagcctttgcggggcccccagcttcgtgttccgccgctcagcttccctgggc
gcttcttgcagtcaaagaatgtcattccactctggacgaggcaattcccgtggacgagga
ggatctggtggaagagcttcaactcaaactttccggcctcagaatttgagacagcttcat
cctcagcagcctactgggcagtaccagtatgaacaaccagttgttcccccaaccactttc
acgagtcctccaactgcaagctacttgccacccaggcctgattttgtgccctacccccca
cctgtgcctccaacagcacagactcctgttacccagtgtcccctcaggccccctctcccc
aaccatcaagtgaggccaacttttccagtaccaccttgttttcctcccgttcctcctcct
gtgcctactcctactaacacttcagtacctggaacacctgctacacaaactacttttccc
tatatgatgccacctccttccctgccgccaccacccccagtcataccaccacaagttaat
tacccatcagtttatcccacaacctattcacagcagtctttcccacctcctaattttagt
agttaccagaataactctagttcttttcagaccagcagtaacaataacaacagtagccat
tttaggcacccaactcagtatcaggtagaaaagccttcgagtgaaagaaggtccccagaa
aggagtaagcattatgatgaccatcggcatcgagaacatagtcatggacatggcgaccga
catcggtcagatagtcatggagatcggcgagatagaacccgaagtccagacaggaggaga
caagaaagtagccgccatagatcagattatgatagaggaaggactccacctcgtcaccgg
agttatgagcatagcagagagcgagaacgggacagggacagggacaggcacaggcaccgg
gaaagccgaagatccccgtctccagacagatcctacaaaaaagagtacaaacgaactagc
agccgatcaccaagtagagagaagaagagaactcgatgggaagatgacagagatcgatgg
cttgacaaccagaattctggcaaagaaaagagctatacctcaatcaaggacaaagagcca
gaggatatcatgcctgacaaaaatgaagaagaagaagaggatctgcttaaaccagtctgg
attcgttgtactcattcagaaagctactattctaatgatcccatggatcaagtgggagat
tctaccgttgttgggactagtagacttcgagatttatatgaaaagtttgaagaagaattg
gggaagaggcaagcaaaagcaaaagctgtgaggcccccatgggagccacccaagaccaaa
ctcgatgaggatttagacagctccagtgaatctgactgtgattctgatgacgacagcagc
tgctccagcagttcagactctgatgtttttgatgtaattgctgaaatcaaacgcaaaaaa
gcccaccctgatcgacttcatgaagaactctggtataatgacccgggacagatgaatgat
ggccctctttgtaaatgcagtgctaaagcaaggcgcacaggaatccgacacagcatctac
ccgggtgaagagcccatcaaaccctgtcgtcctatgaccaacaatgctggcagactatat
cattatcgaattacagtttcgcctcctacaaactttttaactgatagaccaactgttata
gaatatgatgatcatgaatatatttttgaaggattttctatgtttgcacatgctcctctg
accaatattcccctgtgtaaagtaattagatttaacatagactacacaattcatttcatt
gaagagatgatgcctgagaatttttgtgtgaagggccttgagctcttttccttgtacctg
ttcagagacattttggagctctatgattggaatcttacaggcccttcatttgaaaataat
agttcatgctgtccaagatttcatttcatgccacgttttgtaagatttctaccagatgga
ggaaaggaagtgctatcaatgcaccagattctactctatttgttgagatgtaacaaagct
ttagtgcctgaagaggagattgcaaatatgcttcagtgggaagaacttgaatggcagaaa
tatgcagaggaatgcaaagggatgattgttaacaatcctggcatgaaacctagctcagta
cgcattgatcaactggatcgggaacaattcaaccctgacgtgattacttttccaattatt
gtccactttgggatacgccctgcccagttgagttatgcaggagaccctcagtatcagaag
ctgtggaaaagctacgttaagctccgccacctgttggcaaatagccccaaagtcaaacaa
gctgacaagcaaaagttggcacagagagaggaagctctgcagaaaattcgacagaagaat
acaatgagaagagaggtgactgtggaactgagtagccaaggattctggaaaactggtatc
cgctctgatgtttgccagcatgcaatgatgcttccagttttgactcatcacattcgttat
caccaatgcttgatgcatcttgacaagttgataggatatactttccaagatcgttgtctg
ctacagctagcaatgactcatcccagtcatcacctaaactttggaatgaatcctgatcat
gctcgtaactctttatccaattgtgggatacgtcaacctaaatatggagacagaaaagtc
catcacatgcacatgaggaaaaaaggaattaacaccttaataaatatcatgtcacgcctt
ggtcaagatgaccctactccttccagccacagactgaacccgaactccagcaagccgtct
cacaaatgtgtgcccttgagtgcaaggaagatcaggattaaccacaatgaacgtttggaa
ttcctgggtgatgcagttgttgaatttctaactagtgtccatctgtactacctatttcct
agcctagaagaaggaggactagcaacttatcgtactgctattgttcagaatcaacatctt
gctatgctagcaaagaaacttgaactggatcgattcatgctttatgctcatggacctgat
ctctgtcgggaatcagaccttcgccatgctatggcaaattgttttgaggccttaatagga
gctgtttacttagaaggaagccttgaagaagctaagcagttgtttgggcgtttacttttt
aatgacaaggacctccgagaagtatggcttaattatccactacacccactccaactacaa
gagccaaatactgatcgacaacttattgaaacctctccagtattacagaagcttacagag
tttgaagaagctattggagtcatttttacacacgttcgacttttggcacgagcattcaca
ttgagaacagtgggatttaatcatctgactttaggccataatcagagaatggaatttctg
ggtgactccataatgcagttggtagctacagaatatttattcattcattttcctgatcat
catgaaggtcatttaacgctgttacgcagctctttggtgaacaacagaacacaagcaaaa
gtagcagaagagttgggcatgcaggaatatgccatcaccaatgacaagaccaagagacct
gtggcactacgtactaagaccttggctgatcttttggaatcatttattgctgcactgtac
attgataaggatctggaatacgttcacactttcatgaatgtgtgcttctttccaaggtta
aaggagttcattttgaatcaggattggaatgatcctaaatcccaacttcagcagtgctgc
ctgacccttagaacagagggaaaagagcccgacattcctctctataagactcttcagacc
gtgggaccatctcatgcaagaacttacactgtggctgtttatttcaaaggggaaagaata
ggctgtggtaaaggcccaagtattcaacaagcagaaatgggagctgcaatggatgcactt
gaaaaatataattttcctcagatggctcatcagaagcggttcattgaacggaaatacaga
caagagttaaaagaaatgagatgggaaagagaacatcaagagaaagaaccagatgagact
gatgaagtagtgacaccatacatacaagtgaaacgtgaagaattaagtccctga
DBGET
integrated database retrieval system
