Sarcophilus harrisii (Tasmanian devil): 100933931
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Entry
100933931 CDS
T02286
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-C
KO
K04551
ubiquitin B
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04120
Ubiquitin mediated proteolysis
shr04137
Mitophagy - animal
shr04140
Autophagy - animal
shr05012
Parkinson disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100933931
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100933931
04137 Mitophagy - animal
100933931
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
100933931
09164 Neurodegenerative disease
05012 Parkinson disease
100933931
05022 Pathways of neurodegeneration - multiple diseases
100933931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100933931
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100933931
Ubiquitin system [BR:
shr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
100933931
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of breast milk
100933931
Exosomal proteins of other body fluids (saliva and urine)
100933931
Exosomal proteins of colorectal cancer cells
100933931
Exosomal proteins of bladder cancer cells
100933931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
DUF2604
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100933931
NCBI-ProteinID:
XP_031823731
Ensembl:
ENSSHAG00000013179
LinkDB
All DBs
Position
4:441332044..441334243
Genome browser
AA seq
489 aa
AA seq
DB search
MVSISFVFAKITMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGK
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGXPPDQQRLI
FAGKEEVTRLXHNIQKEYLHLVRARGGXFWKTLTETSPGVEPRNIENAKPKSKTKRHPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGC
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccataagctttgtgtttgccaagatcacaatgcagatctttgtgaaaaccctg
acagggaagaccatcaccctggaggtggagcccagtgatactattgagaatgtcaaaacc
aaaatccaagacaaagagggcatccctcctgaccagcagaggctcatctttgcaggcaag
gtggagcccagtgatactattgagaatgtcaaagccaaaatccaagacaaagagggcatc
cctcctgaccagcagaggctcatctttgcaggcaagcagctggaagacggtcgtaccctg
tctgactacaacatccagaaagaatccacccttcatctggtcctgcgtctcagaggtggt
atgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtggagcccagt
gacactattgagaatgtcaaagccaaaatccaagacaaagagggcatccctcctgaccag
cagaggctcatctttgcaggcaagcagctggaagacggtcgtaccctgtctgactacaac
atccagaaagaatccacccttcatctggtcctgcgtctcagaggtggtatgcagatcttt
gtgaagaccctgacgggcaagaccatcaccctggaagtggagcccagtgatactattgag
aatgtcaaagccaaaatccaagacaaagaggganntcctcctgaccagcagaggctcatc
tttgcaggcaaggaagaggtcacccgtctgnnacacaacatccagaaagaataccttcat
ctggtccgcgctagaggtggangattttggaagaccctgacggaaacctcacctggagtg
gagcccaggaacattgagaatgcaaagccaaaatccaagacaaagaggcatcctgaccag
cagaggctcatctttgcaggcaagcagctggaagatggtcgtaccctgtctgactacaac
atccagaaagaatccactctccatctggtcctgcgtctcagaggtggtatgcagatcttt
gtgaagaccctgacgggcaagaccatcaccctagaagtggagcccagtgatactattgag
aatgtcaaagccaaaatccaagacaaagaaggcatccctcctgaccagcagaggcttatc
tttgcaggcaagcagctggaagatggtcgtaccctgtctgactacaacatccagaaagaa
tccacccttcatctggtcctgcgtctcagaggtggtatgcagatctttgtgaagaccctg
acgggcaagaccatcaccctagaagtggagcccagtgatactattgagaatgtcaaagcc
aaaatccaagacaaagagggcatccctcctgaccagcagaggctcatctttgcaggcaag
cagctggaagatggtcgtaccctgtctgactacaacatccagaaagaatccacccttcat
ctggtcctgcgtctcagaggtggctgctaa
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