Sarcophilus harrisii (Tasmanian devil): 100933973
Help
Entry
100933973 CDS
T02286
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03250
Viral life cycle - HIV-1
shr04623
Cytosolic DNA-sensing pathway
shr05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100933973 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100933973 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100933973 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
100933973 (SAMHD1)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100933973 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
100933973
NCBI-ProteinID:
XP_031809828
LinkDB
All DBs
Position
2:complement(423711118..423770298)
Genome browser
AA seq
621 aa
AA seq
DB search
MREHGTPSKRARCGTPSPTSEPPAARSAEEPEDDAEPQSWETERLCSFLRDRGFCNPTLL
SRIQENKIGCTQLLSLDESLLENLGVSSLEERQKLLDCISQLNQDHEETMKIFNDPVHGH
IELHPLLIRIIDTPQFQRLRYIKQLGGAYYVFPGGSHNRFEHCLGVGYLAGCLVHALHEK
QPELQITERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPRARPGYDWKHEMGSVKMFEYLV
NANGIENVMKKYGLVPEEDICFIKEQIAGPLESTEVSSSWPYKGRPEEKNFLYEIVANKR
NGIDVDKWDYFARDCHHLGIPNNFDHKRFIKFARVCEVDNKKHICTRDKEVGNLYDMFHT
RNCLHRRAYQHRVGNLIETMITHAFLKADPHIEIEGSGGKKYTLSTAIDDMEAYAKLTDN
IFLEILQSRDPKLAEAREILLKIQSRKLYKFVGETQPTGQEKIRMEQYEQLPKDVAASTP
ELTDLKVELKAEDFIVDVVNMDYGMQEKNPIDHVYFYCKSDRSKTVLITKNQVSQLLPEK
FAEQLIRVYCKKTDKQSLEAARQYFVQWCINNNFTKPQDSDVVAPELTPMKASWNLRCRD
QSPDRNRECSNVKTKLFQEKN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagggaacacgggacaccttcaaaacgtgctcgctgcgggactccttctcccacctcg
gagcccccggcggcccgatccgcggaggagcccgaggacgacgccgagccgcagagctgg
gagaccgagcggctgtgctctttcctccgcgaccgcggcttctgcaacccgacgctgctc
agccgcatacaagaaaacaaaatcggatgcactcagctgctcagccttgatgaatcgctt
cttgaaaatcttggagtaagttctttagaagaaagacagaaactgctggattgtatcagt
caactgaatcaagaccatgaagagacaatgaagatatttaatgatcctgttcatggccat
atagaacttcaccctcttcttatccgaatcattgacacacctcaatttcaacgacttcga
tatattaaacagctgggaggtgcttactatgtttttccaggtggctcacacaaccgattt
gagcattgtctaggtgtcgggtatctagcaggatgtctggtccatgcactgcatgaaaag
cagcctgaactacaaataactgagcgggatatgctgtgtgttcagattgctgggctttgt
catgatctaggtcatggaccattttcacacatgtttgatggaaggtttattccccgtgct
cgcccaggatatgattggaagcatgaaatgggttcagtcaagatgtttgagtacctggtt
aatgccaatggaattgaaaatgtaatgaagaaatatggacttgttccagaagaagatata
tgttttatcaaagaacaaattgcaggacctcttgagtcaacagaagtgagttcttcgtgg
ccgtataaagggcgacctgaagagaaaaactttctttatgagatagtggctaataagcgc
aatggcattgatgtggataaatgggattattttgccagggattgccaccatcttggaatt
ccaaataactttgaccataagcgttttattaagtttgcccgtgtatgtgaagtagacaat
aagaaacatatttgcaccagagacaaggaagttggaaatctgtatgacatgttccataca
cgcaactgcctgcaccgaagagcttaccagcacagagttggcaacctcattgaaacaatg
attacacatgccttccttaaagcagatccccatatagaaatagaaggtagtggggggaaa
aagtacacgctttctacagcaattgatgatatggaagcctacgcaaaacttacagataac
atttttctggagattttgcaatctcgtgatcccaaattagctgaggcacgagagatttta
ctgaaaattcaaagtcgtaaactatacaagtttgtgggtgaaactcagccaacagggcaa
gagaagattagaatggagcaatatgagcagcttccaaaagatgttgctgcttccacacca
gaacttacagatctaaaagttgaattaaaggctgaagatttcatagttgatgttgtcaac
atggattatggaatgcaagaaaaaaatcctattgatcatgtttatttctattgcaagagt
gaccgaagtaaaacagtcttgattacaaaaaatcaggtttcacagcttctacctgaaaaa
tttgctgaacagcttatccgagtgtactgtaagaaaacagataagcaaagtttagaggct
gccaggcagtattttgttcagtggtgcataaacaacaacttcaccaaaccacaggatagt
gatgttgtggccccagaactaacacctatgaaagcaagttggaatctccggtgtagagac
caaagtccagatcgtaacagagagtgttccaacgtcaaaaccaaactttttcaggaaaaa
aattaa
DBGET
integrated database retrieval system
