Sarcophilus harrisii (Tasmanian devil): 100933985
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Entry
100933985 CDS
T02286
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100933985 (PDZRN3)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100933985 (PDZRN3)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100933985 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100933985
NCBI-ProteinID:
XP_003762415
Ensembl:
ENSSHAG00000016709
UniProt:
G3WW77
LinkDB
All DBs
Position
1:complement(35773729..36049962)
Genome browser
AA seq
789 aa
AA seq
DB search
MGCSLCSLQKQEEQYKLLYEVCQVNGKDLSKATHDQAVEAFKTAKEPIVVQVLRRTPRTK
MFTPSLDSQLVDMGTQTDITFEHIMALTKMASPTPPVLDPYLLPEEHSSAHEYYDPNDYM
GSIHQEMDRDELELEEVDLYRLNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGR
IREGDRIIQINGIEVQNREEAVALLTSEESKNVSLLIARPELQLDEGWLDDDRNDFLDDL
HMDMLEEQHHQAMQFTASVLQQKKREEDEVTTDTATILSNQHEKDSGVGRTDESTRNDES
SRNDESSEQENNADDHTTSSNTLGSQRKLTYSQDTLGSGDAPFSNESFISADCTDADFLG
IPVDECERFRELLELKCQVKSANPYSLYYQNSALEVSKSDPESVDRELEMLNEELRNIEL
ECLNIVRAHKMQQLKDQYRESWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSA
YNTGESCRSTPLTLEISPDNSLRRIAENIGCQGSDGAMSASAACKASQRNLLSITESPET
SSPKYSPSPKELDLSKQLENKEKKSSDESKSPSQSPKLGGSYLSPYHHSPYKHAHIPAHA
QHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNASNQSEPRMEWKVKIRSDGTRYITKRP
VRDRLLRERALKIREERSGMTTDDDAISEMKMGRYWSKEERKQHVVKAKEQRRRREFMMQ
SRLDCLKEQQGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVY
NSFLSVTTV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagcttgtgcagtctgcagaagcaagaagaacagtacaaattactgtatgaa
gtttgtcaggtgaatgggaaggatttatccaaagcaacccatgatcaagctgtggaagct
ttcaagacagccaaagaacccattgttgtccaggtcttaagacggacccctcgaacaaag
atgtttactccttcactagactcccagctggtggatatgggcacccaaactgacatcacc
tttgagcatatcatggcactgactaagatggcatcccccaccccaccggtattggatcca
tatctcttgcctgaagagcattcatctgctcatgaatactatgatccaaatgactacatg
ggaagcatccatcaggagatggacagagatgagttagaactggaggaggtggatttgtac
cgattgaatagccaagataaacttggtctcactgtgtgttaccggacagatgatgaagac
gacattgggatttatataagtgagattgatcccaacagcatcgccgcaaaggatggacgc
atccgagagggagaccggatcatccagattaatggtatagaagtacaaaaccgagaggaa
gctgtggcgcttctcaccagtgaagagagcaagaatgtctcattgctaatagcaagacct
gaactccagctggatgaaggatggctggatgacgatagaaacgattttctggatgactta
cacatggacatgctggaagaacagcaccaccaagctatgcagttcacagccagcgtgctt
cagcagaaaaagcgtgaggaagatgaagtcaccacagacaccgccaccatcttgtcgaac
cagcacgagaaggacagcggcgtggggcgcacagacgagagcacccgcaacgacgagagc
tcccgcaacgacgaaagctccgagcaagagaacaacgccgatgaccacaccacgtcttcc
aatactctggggagtcagagaaaactgacatacagtcaggacacccttggcagcggagac
gcgcccttcagcaacgagtcctttatttcagccgactgcacggacgccgacttccttggg
attccggtggacgagtgtgagcgctttcgggaactcctcgaactcaagtgccaggtaaag
agtgccaatccctacagcctgtattatcagaacagtgccctcgaagtgagcaagagtgac
cccgagagcgtggacagagagctggagatgctgaacgaagagcttcgcaacatcgagctg
gaatgtctgaacattgtccgggctcacaaaatgcagcagctgaaggatcagtatcgggaa
tcgtggatgctgcacaacagcggattccggaattacaacaccagcattgatgtccgccga
cacgagctctcggacatcacggaactccccgagaaatctgacaaggatagttccagcgcc
tacaatactggggagagctgtcgcagcacccccctcacccttgagatctccccagataac
tccctgcggagaatcgcagagaacatcggctgccagggcagcgatggggccatgagcgcc
tctgccgcttgcaaggcgtcccagaggaacctgctctctatcacggagagtccagagacc
agcagccccaagtactccccctctccaaaagaacttgacctcagcaaacagttggagaac
aaagagaagaagtccagtgatgaaagcaagagcccaagccagagcccgaagttagggggc
tcttacctgtcgccctatcaccactccccctacaagcacgctcacatccccgcccacgcc
cagcactaccagagctacatgcagctgatccagcagaaatcagcggtggaatacgcccaa
agccagatgagtctggtcagcatgtgcaaggacttgaacgcctccaaccagtctgaaccc
cgcatggagtggaaggtgaagataaggagcgacgggactcgctacattaccaagcgcccg
gtgcgagaccggctcctccgcgagcgcgccctgaagatccgagaggagcgcagcgggatg
acaaccgacgacgacgccatcagcgagatgaagatggggcgctattggagcaaagaggaa
cggaagcagcacgtggtgaaagctaaggagcagaggagaagacgcgagttcatgatgcag
agcaggctggattgcctgaaagagcagcaaggggccgaagaaaagaaggaaatgaatatc
attgaactgagccacaaaaagatgatgaagaagagaaacaaaaaaatctttgataattgg
atgacgatccaagaactcttaacccacggtacaaagtcccctgatggcactagagtatac
aattccttcttatcagtgactactgtataa
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