Sarcophilus harrisii (Tasmanian devil): 100934064
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Entry
100934064 CDS
T02286
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shr03009
]
100934064 (DDX55)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100934064 (DDX55)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
Pre-60S particles
Helicases
100934064 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
DUF4241
AAA_22
Motif
Other DBs
NCBI-GeneID:
100934064
NCBI-ProteinID:
XP_031804302
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Position
1:complement(684853016..684864672)
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AA seq
601 aa
AA seq
DB search
MEHVTEGAWETLPVPLHPGVLAALRELDFPRMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILQILLRREEKLKKMQVGAIIITPTRELAIQISEVLLHFSKHFPQFSQILLIGG
RNPGEDVERFKEQGGNIIVATPGRLEDMFRRKAEGLDLANCVKSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKEEKHLVFFSTCACVEYYGKALEALVKNVKILCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGRAGSALVFLLPMEESYVNFLSINQKCPLQEMKPQKNPADLLPQLKSMALADRAVFEK
GMKAFVSCVQAYAKHECNLIFRLKDLDFASLARGFALLRMPRMPELKGKQFPDFVPVTID
TDTIAFKDKNREKQRQKFLEQQRKEKKENEGRKKFIKNKAWSKQKAKKEKKKKMTEKRKR
EEDFDIEDEDMQELLNDTRLLKKLKKGKMSEEEFEKRLLAHGKGKAHLEHLGSSDLDGDD
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgtgacggaaggcgcctgggagacgctgcctgtgccgctgcacccgggggtg
ctggcggctctgcgcgagctcgacttcccccgcatgacgcccgtgcagtctgccaccata
ccgctctttatgaagaacaaagatgtggctgcagaagctgtcacagggagcggcaaaaca
ctggcttttgtcattcccatcctgcaaattctgctgaggagggaagagaagttaaaaaaa
atgcaggttggagctatcatcatcacacccacgagagagctcgccatccagatcagtgaa
gtgctgctacatttttctaagcacttcccacaatttagccagattcttttaattgggggt
aggaacccaggagaagatgttgaaaggttcaaagaacaaggtggaaacatcatagttgcc
actccaggccgcttggaggacatgttcaggagaaaggctgaaggtttggatttggcaaat
tgtgtgaagtcccttgatgtcctggtgttggatgaagcagaccgccttttggacatgggg
tttgaagccagtataaacactattctggaatttttgccaaagcagaggagaacaggcctc
ttctctgccactcaaactcaagaggttgagaacctggtgagggctggccttcggaatcct
gtccggatttcagtgaaagagaagggagtggcagccaccagcactcagaagactcccagc
cgcctggagaactactacatggtctgcaaagcagatgagaaatttaatcaacttgtgcat
tttctccgaaatcataaggaggaaaaacacctggtattcttcagtacctgtgcctgtgtg
gaatattatggaaaggctcttgaggccctggttaaaaatgtaaaaatattgtgcattcat
ggaaagatgaaatataaacgcaataagatattcatggagtttcgtaaactgcaaagtggt
attttagtgtgcactgatgtgatggcccgggggatagacattcctgaagtaaattgggtt
ttgcagtatgatccacctagcaatgcaagcgctttcgtgcatcgctgtgggcgcacagcc
cggattggccgggccggcagcgccctggtgttcttgcttcccatggaagagtcctatgtc
aatttcctttccatcaaccaaaagtgtcccctgcaggagatgaagccgcagaaaaaccca
gctgaccttctcccccagctgaagtcaatggctttggcagaccgagcagtatttgaaaag
gggatgaaagcttttgtgtcttgtgtccaagcctatgcaaagcacgagtgcaatctcatc
ttccgattaaaagatctagattttgctagtcttgcccgaggttttgccctcttacggatg
cccaggatgccagagctaaaaggaaaacagtttccagattttgtgcctgttactattgat
acagacactattgcctttaaagataaaaacagagagaaacagagacagaaatttctagag
caacaaagaaaagaaaaaaaagagaacgaaggaagaaagaaatttatcaagaacaaagcc
tggtcaaagcagaaagccaagaaggaaaagaagaaaaaaatgactgaaaagagaaaaaga
gaagaggattttgatattgaagacgaggacatgcaagagctgctcaatgatacaagactc
ttgaaaaagttgaaaaagggcaaaatgagtgaagaagagtttgagaagagattgttggct
catggcaaaggcaaggcccatcttgagcacttggggtcctcggatctggacggtgatgac
agctga
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