Sarcophilus harrisii (Tasmanian devil): 100934151
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Entry
100934151 CDS
T02286
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03015
mRNA surveillance pathway
shr03040
Spliceosome
shr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100934151 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
100934151 (NCBP1)
03015 mRNA surveillance pathway
100934151 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100934151 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100934151 (NCBP1)
03041 Spliceosome [BR:
shr03041
]
100934151 (NCBP1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100934151 (NCBP1)
Spliceosome [BR:
shr03041
]
Common components
Common spliceosomal components
Cap binding complex
100934151 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
100934151
NCBI-ProteinID:
XP_031825233
UniProt:
G3WTF4
LinkDB
All DBs
Position
1:complement(214678125..214726905)
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AA seq
794 aa
AA seq
DB search
MSRRRHSDENDEQPHKRKKTLQSIEIEDRIESLICRVGEKSTFSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLFPLKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNY
DEAVILVHFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVFAFLSSLPWVG
KELYEKKDAEMDRIFSTVESYLKRRQKTHVPLLQVWTADKPHPQEEYLDCLWAQIQKLKK
DRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEEHLHFIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELFQ
LPVPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDFENPKPKFVREVLEKCMRLSYHQRILDIVPPAFAPLCPANP
TCIYKYGDESSNSLPGHSVALCLAVAFKSKASNDEIFSILKDVPNPNQDDDDDEGFSFNP
LKIEVFVQTLLHLASKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFIWEILHSTIRKMNKHVVKIQKELEE
TKEKLARQHKRRDDRSSDRDDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEH
LVRCETDGTNILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILAVFQQ
FCALQACGFFPPSS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcatagcgacgagaacgatgaacaaccccacaaaaggaagaagacc
ttgcagtcgattgaaatcgaagatcggatagaatctctaatatgcagagtaggagaaaag
agtactttctcattggaaagcaacttagaaggcttagctggtgttttggaagctgatctt
cccaactacaagagcaagattctaagaattctttgtacagttgctcgtctgtttcctttg
aaattgacggtgtatacaacattagttggactacttaatgcccgaaattacaactttggt
ggagaatttgtggaagccatgattcgtcaacttaaagaatctttgaaagcaaacaactat
gatgaagctgtgattttggtccattttttatcagatcttgtgaattgtcatgtaatagct
gctccatcaatggtagctatgtttgaaaattttgtaagtgtaactcaggaagaagatgtg
cctcaggtacgacgtgattggtatgtgtttgcatttctgtcatctttgccctgggttgga
aaggagttatatgaaaaaaaagatgcagagatggatcgcattttttccactgttgaaagc
tatcttaaaagacgtcaaaaaactcacgttccattgttacaggtgtggactgctgataaa
ccacatccacaagaagagtatttagattgcctttgggctcagattcagaaattaaaaaaa
gatcgctggcaggaacggcacatcctgagaccataccttgcctttgacagcatcctctgt
gaagccttgcagcacaacctgcctccttttactccaccacctcatacagaagactcggta
tacccaatgccaagggtcatctttaggatgtttgattacacggatgatcctgagggtcct
gttatgccaggcagtcattcggtggaaagatttgtaatagaagagcatcttcacttcatc
attaaatcacactggaaagaaaggaagacatgcgctgcacaactagtgagctatccagga
aagaacaagatccccttgaattatcacattgttgaggtgatctttgctgagttatttcag
cttcctgtaccccctcacattgatgttatgtacacaactcttctcattgaactgtgcaag
cttcaacctggctctttaccccaagttcttgcacaggcaactgaaatgttgtacatgcgt
ttggatacaatgaatactacatgtatagacagattcattaattggttttcccatcaccta
agtaacttccagtttcgttggagctgggaagattggtcagattgtcttacccaggatttt
gaaaatcccaagcccaaatttgtaagagaagtactggagaaatgtatgcggctttcatac
catcagcgcatattagatattgttcctccagcttttgctcctctgtgtcctgcaaatcca
acatgcatttacaagtatggagatgaaagtagcaattctcttccaggtcattctgtagcc
ctctgtttagctgttgcctttaaaagtaaggcaagtaatgatgaaatcttcagcattttg
aaagacgtcccaaatcctaaccaagacgatgatgatgatgaaggattcagttttaaccca
ctgaaaatagaagtctttgtgcagactctgcttcacctcgcttccaagtcatttagccat
tctttcagtgctcttgcaaagtttcatgaggtcttcaaaacccttgcagaaagtgatgag
ggaaagttacatgttctaagagtcatgtttgaagtctggaggaatcatcctcagatgatt
gctgtattagttgataagatgattcgaacacagattgtggactgtgctgcagtagcaaat
tggatcttctcttcagagctctctcgtgattttactaggttgtttatctgggaaatttta
cactctacaattcgaaagatgaacaaacatgttgtgaaaatccagaaagaattagaggaa
actaaagaaaaacttgcaagacagcacaaacggcgtgatgacagaagcagtgacagggat
gatggggcattagaggagcaaatagaacgtctgcaagagaaagttgagtcggctcagagt
gagcaaaagaatcttttccttgtcatattccagcgctttatcatgatactaacagaacac
ttagtacgatgtgaaactgatgggaccaatatattaacaccttggtacaagaactgtata
gagagattgcaacagatcttcttacagcatcatcaaataatccaacagtacatggtgacg
ttggaaaaccttctctttacagctgaattggaccatcatattttagctgtattccaacag
ttctgtgctctgcaggcctgcggattttttcctccttcgagttga
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