Sarcophilus harrisii (Tasmanian devil): 100934190
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Entry
100934190 CDS
T02286
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100934190 (PRDM1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100934190 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2HE
zf-C2H2_jaz
zf-met
B129_C2H2-zf
STL11_N
zf-C2H2_FBX41
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
100934190
NCBI-ProteinID:
XP_003769374
Ensembl:
ENSSHAG00000010080
UniProt:
G3W8I6
LinkDB
All DBs
Position
4:complement(196031068..196056722)
Genome browser
AA seq
816 aa
AA seq
DB search
MLDFYLEKLVDTTLAATQCSSDTVNFPTLVEGAEGTMKMDMEDADMTLWTEADFEEKCTY
IVNDHPWDSGADGGSAIQAEASLPRNLVFKFATNCKEVIGVISKEYIPKGTRFGPLIGEI
YTNDTVPKNANRQYFWRIYSNGELHHFIDGFNEEKSNWMRYVNPAHSVQEQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPSSGELMKMNLTQTHISSKQQSTEKNELCP
KSVPKREHSVKEILKNDSSHSKGKSFFHPNISLITPEKDMDDFRKNCSPERPICPRVIYP
IRVPNAEDLLKASLTYRMERPTYITHSPIPSSTTPSPSAISSPDQSLKSSSPHGSLGDTV
SPLAPISQEHRESYPYLNTHYGTEGLGSYPGYIPPSHLPPAFFPSYNTHYPKLLLPPYGM
SCNSLSTVNNINGINNFNLFPRLYPVYGNLPHSMFNSALPNSLPSEGSRRLLQPEHPRDV
LVPAPHSAFSITSAATSMKDKPCSPTSGSPTAGDTSEHMIQPKATSTILADNRSEEAINL
IKSKRNMTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCN
KGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFT
QFVHLKLHKRLHTRERPHKCTQCHKSYIHLCSLKVHLNGYCPLDPTSGLSMEDLTRINEE
IEKFDISDNADRLEDTEDGTDMTSVVEKEILALLRREMDGANLKMSLQRNMGNGLISSGC
NFYESSDPSLMKLPHSHPLPLLPVKVKQETVEPMDP
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgttggatttttatttggaaaaacttgtggatacgactttggctgccacccagtgtagc
tccgacaccgtaaattttccgaccttggtagagggggcagagggaaccatgaaaatggac
atggaagatgctgacatgactctgtggacagaggcagattttgaagaaaagtgcacatac
attgtgaatgatcatccttgggactctggtgctgatggaggatctgccattcaggcggaa
gcatctttgccaaggaatctggttttcaaatttgcaacgaactgcaaagaggttattgga
gtaataagcaaagaatacataccaaaaggaacacggtttggacccttgataggtgaaatc
tataccaatgataccgttcccaaaaatgccaacagacagtatttttggcggatctattct
aatggggagcttcaccacttcatcgatggctttaatgaggaaaaaagcaactggatgcgt
tatgtgaaccctgctcactccgttcaggaacagaatttggctgcgtgtcagaatggaatg
aacatctatttctacactattaagccaatccctgccaaccaggaacttcttgtgtggtat
tgtcgggactttgcagaaagactccactatccttcctccggagagctgatgaagatgaat
ctcactcaaacacacatcagttcaaagcaacaaagcactgagaaaaatgaactttgtccc
aaaagtgtcccaaagagagagcatagtgtgaaagaaattctgaaaaatgattccagccat
tcaaaaggaaagagcttcttccatcctaacatttcactcatcactccagaaaaggacatg
gatgacttcaggaaaaactgcagccctgaaaggcctatatgccctcgggttatctaccca
atccgagttcccaatgcagaagacttgttgaaagcttctctgacctatcggatggagaga
cctacttacatcactcactcccccatcccatcatccaccactcctagcccttcagcaata
agcagcccagaccaaagcttgaaaagctccagccctcatggtagcttgggagacacagtt
tcacctttggctcccatttctcaagaacatcgagaatcttacccttacttgaatacacac
tatggcacagaaggactggggtcttaccctggctatataccacccagtcatcttcctcca
gctttcttcccttcttataatactcattatcccaagttacttttacctccatatggtatg
agctgtaatagcctgagtactgtgaacaacataaatggcatcaataacttcaatctcttc
ccaaggttatatccagtctatggtaacttgcctcattccatgttcaactcggctcttcca
aattcattgccctccgaaggatcccggagattgttgcaaccagagcaccccagagatgtt
cttgtacctgcaccccacagtgccttttctatcaccagcgcagccaccagcatgaaagac
aagccatgtagtccaacgagtgggtccccaactgctggggacacatctgaacatatgata
caacctaaagctacctcaacaatattggctgacaacaggagtgaagaagccataaatctc
attaaaagtaaaagaaatatgactggttacaaaacacttccatatccactgaagaaacag
aatggaaagattaagtacgagtgtaatgtttgttccaagacttttgggcaactctcaaac
ctgaaggtccacctcagagtacacagtggagagcgaccattcaaatgtcaaacttgcaat
aagggtttcactcagctcgcccacctacagaaacactacctggtccacactggagaaaag
cctcatgaatgtcaggtttgccacaagcgattcagcagcaccagcaatcttaagactcac
ttgagacttcactctggagagaaaccataccagtgtaaactgtgcccagccaagttcacc
cagtttgtgcatctgaaactccacaagcgcctacacacccgagagaggccacataagtgt
actcagtgccacaagagctacatccacctctgtagtcttaaagttcacctaaatggctat
tgccccctagatcctacttctggtctatccatggaggacctaacccgaatcaatgaagaa
atagaaaagtttgacatcagtgacaatgcagaccggctagaagacacggaggatggtact
gatatgacctctgtggtggagaaagagatcctggctttgctcagaagagagatggacggc
gccaacctgaaaatgtctttgcaaaggaacatgggaaatggactaatctcctcaggatgt
aacttttatgagtcatcagacccgtcccttatgaagttgcctcacagtcacccactacct
ctgttacctgtaaaggtcaaacaagaaacagttgaaccaatggatccttaa
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integrated database retrieval system
